Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 0.0e+00 1236.5 659 100.0
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 1.0e-229 800.4 705 66.0
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 2.0e-177 626.7 671 58.3
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 3.1e-170 602.8 704 53.3
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 2.2e-168 596.7 704 53.3
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 6.5e-168 595.1 713 51.9
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 6.5e-168 595.1 675 54.8
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.1e-167 594.3 698 53.2
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 1.4e-167 594.0 707 51.8
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 8.8e-165 584.7 687 52.7
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.4e-162 576.6 699 52.4
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 3.4e-161 572.8 677 51.4
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 1.2e-158 564.3 675 53.2
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 3.0e-157 559.7 675 53.5
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 1.1e-156 557.8 671 51.4
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 2.4e-154 550.1 676 52.8
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 7.0e-154 548.5 706 48.3
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.4e-151 540.8 681 50.1
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.9e-151 540.4 715 49.1
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 1.6e-150 537.3 708 49.7
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.0e-149 534.6 681 50.1
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 1.0e-149 534.6 681 50.1
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 2.3e-149 533.5 685 48.5
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 1.5e-148 530.8 685 48.8
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 2.0e-148 530.4 676 49.1
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 3.3e-148 529.6 651 49.9
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 8.2e-147 525.0 673 50.2
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 4.1e-146 522.7 719 49.0
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 8.5e-144 515.0 481 65.5
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 1.1e-143 514.6 638 50.5
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 4.0e-141 506.1 669 46.9
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 4.1e-138 496.1 652 48.8
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.2e-132 478.0 673 47.8
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 7.5e-132 475.3 679 47.1
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 5.9e-129 465.7 473 61.1
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.7e-128 464.2 652 47.4
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.6e-126 457.6 733 44.7
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 6.1e-126 455.7 655 45.3
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 3.4e-124 449.9 731 42.8
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 6.3e-123 445.7 649 44.5
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.1e-122 444.9 713 41.4
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 5.0e-120 436.0 651 44.1
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 8.6e-120 435.3 673 43.4
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 7.3e-119 432.2 685 42.5
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.8e-118 430.3 667 43.0
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.5e-116 424.5 623 47.2
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 3.7e-115 419.9 678 43.8
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.3e-115 418.7 653 44.3
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 1.4e-114 417.9 650 44.6
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 1.9e-114 417.5 639 44.6
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 2.4e-114 417.2 726 40.4
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 5.4e-114 416.0 685 44.1
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 9.2e-114 415.2 667 42.4
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.6e-113 414.5 611 46.8
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.9e-112 409.8 554 47.8
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 3.9e-112 409.8 673 40.6
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 2.5e-111 407.1 645 42.2
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 9.5e-111 405.2 314 67.5
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 6.2e-110 402.5 706 40.1
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.5e-108 397.9 653 43.6
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 2.6e-108 397.1 596 47.1
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 9.5e-103 378.6 650 42.0
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.1e-102 377.5 613 41.9
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 2.1e-102 377.5 654 41.1
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 7.6e-100 369.0 651 40.7
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 2.9e-99 367.1 517 47.2
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 3.7e-99 366.7 373 62.7
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 8.3e-99 365.5 653 40.4
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 3.2e-98 363.6 726 37.9
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 3.5e-97 360.1 667 38.7
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 4.6e-97 359.8 652 41.0
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 1.9e-95 354.4 542 43.2
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 1.6e-94 351.3 653 39.7
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 1.5e-92 344.7 678 38.1
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.9e-90 337.8 623 39.5
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 5.4e-90 336.3 664 39.0
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 5.4e-90 336.3 657 38.1
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 7.1e-90 335.9 649 37.8
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 2.5e-87 327.4 658 38.8
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 5.6e-87 326.2 687 36.7
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 9.6e-87 325.5 692 35.8
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 7.9e-81 305.8 710 34.8
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.7e-80 304.7 265 60.8
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 3.0e-80 303.9 227 70.0
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.6e-79 299.7 424 44.3
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 3.6e-78 297.0 645 36.4
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 6.2e-78 296.2 644 37.0
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 6.2e-78 296.2 644 37.0
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 6.2e-78 296.2 644 37.0
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 8.1e-78 295.8 645 36.3
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 1.4e-77 295.0 532 43.8
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 1.5e-76 291.6 321 52.3
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 6.0e-73 279.6 686 34.3
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 1.5e-71 275.0 647 35.7
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 2.8e-70 270.8 724 32.6
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 2.4e-69 267.7 664 35.1
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 9.0e-69 265.8 686 33.4
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 8.4e-67 259.2 420 41.9
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.3e-64 251.9 312 48.4
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 1.3e-64 251.9 675 32.4
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 3.0e-64 250.8 673 33.6
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 3.3e-63 247.3 641 34.2
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 5.7e-63 246.5 373 46.4
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 3.2e-58 230.7 509 37.7
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.7e-57 227.6 298 44.3
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 2.3e-56 224.6 693 31.6
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.1e-55 222.2 657 32.1
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 1.8e-53 214.9 642 32.4
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 4.5e-52 210.3 230 53.0
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 1.9e-50 204.9 129 78.3
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.0e-48 197.6 199 55.3
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 5.7e-47 193.4 323 43.0
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 9.7e-47 192.6 214 55.6
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 8.2e-46 189.5 135 71.9
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 3.2e-42 177.6 336 43.2
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 4.7e-33 147.1 710 28.0
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 3.6e-25 120.9 412 27.2
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 2.3e-24 118.2 144 52.1
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 1.3e-22 112.5 329 31.3
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 2.2e-22 111.7 83 62.7
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.1e-21 109.4 212 37.7
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 5.4e-21 107.1 102 52.0
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 4.5e-20 104.0 239 42.3
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 1.7e-14 85.5 500 27.6
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 4.9e-14 84.0 155 40.6
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 2.3e-08 65.1 111 37.8
QL04p005401 Quercus lobata HOM05D000011 ORTHO05D000157 1.7e-06 58.9 246 28.9


User provided reference genes

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