Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048088 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 1.6e-49 199.1 100 100.0
CSS0016455 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 1.5e-44 182.6 100 92.0
CSS0001890 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 9.9e-44 179.9 100 91.0
Hma1.2p1_1195F.1_g265790 Hydrangea macrophylla HOM05D006064 ORTHO05D007619 6.8e-37 157.1 98 76.5
Hma1.2p1_3147F.1_g333156 Hydrangea macrophylla HOM05D006064 ORTHO05D007619 6.8e-37 157.1 98 76.5
Nn2g11694 Nelumbo nucifera HOM05D006064 ORTHO05D007619 8.9e-37 156.8 97 77.3
MBI09_g14014_MAGBIO Magnolia biondii HOM05D006064 ORTHO05D007619 1.2e-36 156.4 98 77.6
Dinv38021 Davidia involucrata HOM05D006064 ORTHO05D007619 1.5e-36 156.0 98 76.5
CSS0034695 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 2.6e-36 155.2 100 83.0
TAR383G1034 Trochodendron aralioides HOM05D006064 ORTHO05D007619 3.4e-36 154.8 98 75.5
Cc04_g03040 Coffea canephora HOM05D006064 ORTHO05D007619 5.8e-36 154.1 98 76.5
TAR626G0023 Trochodendron aralioides HOM05D006064 ORTHO05D007619 1.3e-35 152.9 100 75.0
Gohir.D05G131300 Gossypium hirsutum HOM05D006064 ORTHO05D007619 5.4e-34 147.5 99 76.8
Gorai.009G135000 Gossypium raimondii HOM05D006064 ORTHO05D007619 5.4e-34 147.5 99 76.8
Actinidia21680 Actinidia chinensis HOM05D006064 ORTHO05D007619 7.1e-34 147.1 95 75.8
Gohir.A05G131800 Gossypium hirsutum HOM05D006064 ORTHO05D007619 1.6e-33 146.0 99 75.8
PGSC0003DMG400002547 Solanum tuberosum HOM05D006064 ORTHO05D007619 1.6e-33 146.0 99 72.7
Cpa.g.sc98.5 Carica papaya HOM05D006064 ORTHO05D007619 2.1e-33 145.6 102 72.5
Cfa002095 Carpinus fangiana HOM05D006064 ORTHO05D007619 2.7e-33 145.2 100 73.0
Haze_16361 Corylus avellana HOM05D006064 ORTHO05D007619 2.7e-33 145.2 100 73.0
GSVIVG01017072001 Vitis vinifera HOM05D006064 ORTHO05D007619 2.7e-33 145.2 100 74.0
QL05p021654 Quercus lobata HOM05D006064 ORTHO05D007619 4.6e-33 144.4 98 74.5
ATR0693G299 Amborella trichopoda HOM05D006064 ORTHO05D007619 7.8e-33 143.7 98 72.4
COL.COLO4_30435 Corchorus olitorius HOM05D006064 ORTHO05D007619 7.8e-33 143.7 98 73.5
DCAR_016211 Daucus carota HOM05D006064 ORTHO05D007619 7.8e-33 143.7 100 75.0
Solyc03g120630.4 Solanum lycopersicum HOM05D006064 ORTHO05D007619 1.0e-32 143.3 99 72.7
CiPaw.02G148800 Carya illinoinensis HOM05D006064 ORTHO05D007619 1.3e-32 142.9 100 72.0
Thecc.06G092400 Theobroma cacao HOM05D006064 ORTHO05D007619 1.3e-32 142.9 98 73.5
Ah.01g005550 Amaranthus hybridus HOM05D006064 ORTHO05D007619 3.0e-32 141.7 98 73.5
Lj5C58T14 Lonicera japonica HOM05D006064 ORTHO05D007619 3.0e-32 141.7 105 69.5
Duzib235G0379 Durio zibethinus HOM05D006064 ORTHO05D007619 5.1e-32 141.0 98 72.4
Gorai.011G074400 Gossypium raimondii HOM05D006064 ORTHO05D007619 8.7e-32 140.2 98 73.5
Manes.04G130000 Manihot esculenta HOM05D006064 ORTHO05D007619 8.7e-32 140.2 102 69.6
Lsat_1_v5_gn_5_130940 Lactuca sativa HOM05D006064 ORTHO05D007619 1.1e-31 139.8 99 66.7
RcHm_v2.0_Chr2g0138941 Rosa chinensis HOM05D006064 ORTHO05D007619 1.1e-31 139.8 100 71.0
Duzib160G0510 Durio zibethinus HOM05D006064 ORTHO05D007619 1.5e-31 139.4 98 71.4
Gohir.D10G070100 Gossypium hirsutum HOM05D006064 ORTHO05D007619 1.9e-31 139.0 98 72.4
Nitab4.5_0007217g0010 Nicotiana tabacum HOM05D006064 ORTHO05D007619 1.9e-31 139.0 96 70.8
CDE04G2099 Ceratophyllum demersum HOM05D006064 ORTHO05D007619 2.5e-31 138.7 100 69.0
FvH4_6g31770 Fragaria vesca HOM05D006064 ORTHO05D007619 2.5e-31 138.7 100 70.0
CANSAT56G1509 Cannabis sativa HOM05D006064 ORTHO05D007619 3.3e-31 138.3 99 71.7
Gohir.A10G081300 Gossypium hirsutum HOM05D006064 ORTHO05D007619 3.3e-31 138.3 98 72.4
Rhsim08G0223400 Rhododendron simsii HOM05D006064 ORTHO05D007619 5.6e-31 137.5 106 66.0
SalBow2G0408 Salvia bowleyana HOM05D006064 ORTHO05D007619 5.6e-31 137.5 98 70.4
ClCG09G001940 Citrullus lanatus HOM05D006064 ORTHO05D007619 7.3e-31 137.1 99 71.7
Sed0002776 Sechium edule HOM05D006064 ORTHO05D007619 7.3e-31 137.1 99 70.7
AT1G79850 Arabidopsis thaliana HOM05D006064 ORTHO05D007619 9.6e-31 136.7 98 71.4
THA.LOC104800422 Tarenaya hassleriana HOM05D006064 ORTHO05D007619 9.6e-31 136.7 100 70.0
FAN02G0676 Fragaria x ananassa HOM05D006064 ORTHO05D007619 1.3e-30 136.3 98 70.4
FAN09G1878 Fragaria x ananassa HOM05D006064 ORTHO05D007619 1.3e-30 136.3 98 71.4
Thhalv10019289m.g Eutrema salsugineum HOM05D006064 ORTHO05D007619 1.6e-30 136.0 100 70.0
Glyma.13G357200 Glycine max HOM05D006064 ORTHO05D007619 1.6e-30 136.0 97 70.1
Potri.001G184000 Populus trichocarpa HOM05D006064 ORTHO05D007619 1.6e-30 136.0 103 68.0
Ah.01g021630 Amaranthus hybridus HOM05D006064 ORTHO05D007619 2.1e-30 135.6 98 72.4
Prupe.3G067300 Prunus persica HOM05D006064 ORTHO05D007619 2.1e-30 135.6 102 68.6
SGA_v2.0_scaffold5G02555 Striga asiatica HOM05D006064 ORTHO05D007619 2.1e-30 135.6 100 70.0
CARHR074660 Cardamine hirsuta HOM05D006064 ORTHO05D007619 2.8e-30 135.2 99 69.7
FAN05G4262 Fragaria x ananassa HOM05D006064 ORTHO05D007619 2.8e-30 135.2 99 70.7
FAN14G0180 Fragaria x ananassa HOM05D006064 ORTHO05D007619 2.8e-30 135.2 98 69.4
BcaC04g21589 Brassica carinata HOM05D006064 ORTHO05D007619 3.6e-30 134.8 98 69.4
CsaV3_7G033420 Cucumis sativus L. HOM05D006064 ORTHO05D007619 3.6e-30 134.8 101 71.3
Glyma.15G016400 Glycine max HOM05D006064 ORTHO05D007619 3.6e-30 134.8 97 69.1
PSO566G0311 Papaver somniferum HOM05D006064 ORTHO05D007619 3.6e-30 134.8 95 67.4
PSO782G0135 Papaver somniferum HOM05D006064 ORTHO05D007619 3.6e-30 134.8 95 67.4
PGR102G3343 Punica granatum HOM05D006064 ORTHO05D007619 3.6e-30 134.8 100 71.0
Sp2g12850 Schrenkiella parvula HOM05D006064 ORTHO05D007619 3.6e-30 134.8 99 68.7
Carub.0002s2765 Capsella rubella HOM05D006064 ORTHO05D007619 4.8e-30 134.4 98 71.4
Nitab4.5_0001315g0190 Nicotiana tabacum HOM05D006064 ORTHO05D007619 4.8e-30 134.4 92 72.8
EL10Ac9g22030 Beta vulgaris HOM05D006064 ORTHO05D007619 6.2e-30 134.0 98 69.4
CAN.G438.28 Capsicum annuum HOM05D006064 ORTHO05D007619 6.2e-30 134.0 96 67.7
Nn3g18074 Nelumbo nucifera HOM05D006064 ORTHO05D007619 6.2e-30 134.0 99 68.7
Aa31LG4G130 Aethionema arabicum HOM05D006064 ORTHO05D007619 8.1e-30 133.7 100 72.0
MELO3C024255.2 Cucumis melo HOM05D006064 ORTHO05D007619 8.1e-30 133.7 100 70.0
Thhalv10001197m.g Eutrema salsugineum HOM05D006064 ORTHO05D007619 8.1e-30 133.7 98 68.4
AL2G41710 Arabidopsis lyrata HOM05D006064 ORTHO05D007619 1.1e-29 133.3 98 68.4
A09p23360 Brassica napus HOM05D006064 ORTHO05D007619 1.1e-29 133.3 98 68.4
BolC9t55875H Brassica oleracea HOM05D006064 ORTHO05D007619 1.1e-29 133.3 98 68.4
BraA09t37937Z Brassica rapa HOM05D006064 ORTHO05D007619 1.1e-29 133.3 98 68.4
Sc12g0009460 Simmondsia chinensis HOM05D006064 ORTHO05D007619 1.1e-29 133.3 99 67.7
C09p30110 Brassica napus HOM05D006064 ORTHO05D007619 1.4e-29 132.9 98 68.4
SGA_v2.0_scaffold69G23360 Striga asiatica HOM05D006064 ORTHO05D007619 1.8e-29 132.5 100 69.0
Aqoxy7G01608 Aquilegia oxysepala HOM05D006064 ORTHO05D007619 2.4e-29 132.1 99 66.7
BcaB07g30746 Brassica carinata HOM05D006064 ORTHO05D007619 2.4e-29 132.1 98 67.3
Sabra01G0155400 Salix brachista HOM05D006064 ORTHO05D007619 2.4e-29 132.1 100 67.0
vmacro18887 Vaccinium macrocarpon HOM05D006064 ORTHO05D007619 2.4e-29 132.1 97 72.2
AUR62011660 Chenopodium quinoa HOM05D006064 ORTHO05D007619 4.0e-29 131.3 104 65.4
A09p23350 Brassica napus HOM05D006064 ORTHO05D007619 5.3e-29 131.0 98 66.3
BraA09t37936Z Brassica rapa HOM05D006064 ORTHO05D007619 5.3e-29 131.0 98 66.3
AUR62016483 Chenopodium quinoa HOM05D006064 ORTHO05D007619 5.3e-29 131.0 104 66.3
Eucgr.F03039 Eucalyptus grandis HOM05D006064 ORTHO05D007619 6.9e-29 130.6 100 69.0
arahy.Tifrunner.gnm1.ann1.MEX591 Arachis hypogaea HOM05D006064 ORTHO05D007619 1.5e-28 129.4 99 65.7
BcaC04g21590 Brassica carinata HOM05D006064 ORTHO05D007619 1.5e-28 129.4 97 67.0
C09p30100 Brassica napus HOM05D006064 ORTHO05D007619 1.5e-28 129.4 97 67.0
BolC9t55874H Brassica oleracea HOM05D006064 ORTHO05D007619 1.5e-28 129.4 97 67.0
Phvul.005G168800 Phaseolus vulgaris HOM05D006064 ORTHO05D007619 4.4e-28 127.9 97 66.0
Migut.I00941 Erythranthe guttata HOM05D006064 ORTHO05D007619 1.3e-27 126.3 104 64.4
HanXRQChr12g0360791 Helianthus annuus HOM05D006064 ORTHO05D007619 1.3e-27 126.3 99 65.7
Lalb_Chr22g0351371 Lupinus albus HOM05D006064 ORTHO05D007619 1.3e-27 126.3 100 68.0
Oeu033507.1 Olea europaea HOM05D006064 ORTHO05D007619 2.2e-27 125.6 98 65.3
Ciclev10026679m.g Citrus clementina HOM05D006064 ORTHO05D007619 3.8e-27 124.8 103 63.1
MSTRG.11053 Avicennia marina HOM05D006064 ORTHO05D007619 6.4e-27 124.0 99 65.7
MD17G1191100 Malus domestica HOM05D006064 ORTHO05D007619 6.4e-27 124.0 100 66.0
Medtr2g101770 Medicago truncatula HOM05D006064 ORTHO05D007619 1.1e-26 123.2 98 64.3
TWI12G0791 Tripterygium wilfordii HOM05D006064 ORTHO05D007619 1.1e-26 123.2 106 61.3
Ca_01132_v3 Cicer arietinum L. HOM05D006064 ORTHO05D007619 1.4e-26 122.9 98 64.3
TWI75G0440 Tripterygium wilfordii HOM05D006064 ORTHO05D007619 1.4e-26 122.9 106 60.4
Lj3g0008796 Lotus japonicus HOM05D006064 ORTHO05D007619 9.3e-26 120.2 96 63.5
unitig_37.g12253 Utricularia gibba HOM05D000346 ORTHO05D000326 9.3e-26 120.2 98 64.3
VMungo1080G0744 Vigna mungo HOM05D006064 ORTHO05D007619 4.6e-25 117.9 77 72.7
TPR.G37258 Trifolium pratense HOM05D006064 ORTHO05D007619 1.7e-24 115.9 101 60.4
unitig_46.g18557 Utricularia gibba HOM05D006064 ORTHO05D007619 3.0e-24 115.2 100 61.0
SEGI_37104 Sequoiadendron giganteum HOM05D006064 ORTHO05D007619 1.1e-23 113.2 96 61.5
AagrBONN_evm.TU.Sc2ySwM_344.4090 Anthoceros agrestis HOM05D006064 ORTHO05D007619 3.1e-21 105.1 96 57.3
Os04g0691600 Oryza sativa ssp. japonica HOM05D006064 ORTHO05D007619 4.0e-21 104.8 83 60.2
Zm00001eb367450 Zea mays HOM05D006064 ORTHO05D007619 4.0e-21 104.8 83 61.4
AagrBONN_evm.TU.Sc2ySwM_344.4095 Anthoceros agrestis HOM05D006064 ORTHO05D007619 6.9e-21 104.0 96 56.2
Zm00001eb434460 Zea mays HOM05D006064 ORTHO05D007619 1.1e-18 96.7 82 57.3
Actinidia32730 Actinidia chinensis HOM05D006064 ORTHO05D007619 2.4e-18 95.5 98 54.1
Pp3c1_12860 Physcomitrium patens HOM05D006064 ORTHO05D007619 3.2e-18 95.1 99 52.5
Pp3c11_14630 Physcomitrium patens HOM05D006064 ORTHO05D007619 7.1e-18 94.0 72 59.7
Actinidia13476 Actinidia chinensis HOM05D006064 ORTHO05D007619 6.7e-16 87.4 64 67.2
Peaxi162Scf00015g00005 Petunia axillaris HOM05D006064 ORTHO05D007619 6.7e-16 87.4 60 71.7
CBR_g33913 Chara braunii HOM05D006064 ORTHO05D007619 1.8e-13 79.3 87 48.3
SMO358G0237 Selaginella moellendorffii HOM05D006064 ORTHO05D007619 2.4e-13 79.0 69 56.5
Mapoly0027s0119 Marchantia polymorpha HOM05D006064 ORTHO05D007619 4.0e-13 78.2 96 43.8
MD09G1209400 Malus domestica HOM05D006064 ORTHO05D007619 1.2e-12 76.6 49 75.5
Actinidia35657 Actinidia chinensis HOM05D006064 ORTHO05D007619 1.5e-12 76.3 98 46.9
Haze_02816 Corylus avellana HOM05D002629 ORTHO05D003221 1.6e-09 66.2 46 65.2
SalBow1G4549 Salvia bowleyana HOM05D006064 ORTHO05D007619 6.0e-09 64.3 74 50.0
Mapoly0128s0026 Marchantia polymorpha HOM05D004588 ORTHO05D005365 3.0e-08 62.0 77 41.6
AagrBONN_evm.TU.Sc2ySwM_362.494 Anthoceros agrestis HOM05D004588 ORTHO05D005365 1.9e-07 59.3 77 40.3
Migut.J00858 Erythranthe guttata HOM05D004588 ORTHO05D005365 2.5e-07 58.9 90 40.0
CBR_g18728 Chara braunii HOM05D004588 ORTHO05D005365 3.3e-07 58.5 77 40.3
Atru.chr8.1086 Acer truncatum HOM05D004588 ORTHO05D005365 5.7e-07 57.8 90 36.7
CDE04G0148 Ceratophyllum demersum HOM05D004588 ORTHO05D005365 1.3e-06 56.6 91 38.5
FAN04G2743 Fragaria x ananassa HOM05D004588 ORTHO05D005365 1.3e-06 56.6 88 40.9
FAN05G0480 Fragaria x ananassa HOM05D004588 ORTHO05D005365 1.3e-06 56.6 88 40.9
FAN09G1784 Fragaria x ananassa HOM05D004588 ORTHO05D005365 1.3e-06 56.6 88 40.9
MCO03G166 Micromonas commoda HOM05D006064 ORTHO05D007619 1.3e-06 56.6 61 45.9
FvH4_5g34540 Fragaria vesca HOM05D004588 ORTHO05D005365 2.1e-06 55.8 88 40.9
FAN08G2577 Fragaria x ananassa HOM05D004588 ORTHO05D005365 2.1e-06 55.8 88 40.9
FAN18G1354 Fragaria x ananassa HOM05D004588 ORTHO05D005365 2.1e-06 55.8 88 40.9
MD11G1162200 Malus domestica HOM05D004588 ORTHO05D005365 3.7e-06 55.1 96 38.5
SGA_v2.0_scaffold21G09593 Striga asiatica HOM05D004588 ORTHO05D005365 4.8e-06 54.7 90 38.9
SGA_v2.0_scaffold272G46369 Striga asiatica HOM05D004588 ORTHO05D005365 4.8e-06 54.7 90 38.9
ClCG07G006010 Citrullus lanatus HOM05D004588 ORTHO05D005365 6.2e-06 54.3 74 40.5
MELO3C026421.2 Cucumis melo HOM05D004588 ORTHO05D005365 6.2e-06 54.3 74 40.5
Dinv31498 Davidia involucrata HOM05D004588 ORTHO05D005365 6.2e-06 54.3 96 35.4
Potri.006G080200 Populus trichocarpa HOM05D004588 ORTHO05D005365 6.2e-06 54.3 88 37.5
Sabra06G0060700 Salix brachista HOM05D004588 ORTHO05D005365 6.2e-06 54.3 88 37.5
CsaV3_4G009740 Cucumis sativus L. HOM05D004588 ORTHO05D005365 8.2e-06 53.9 74 40.5
FAN14G2878 Fragaria x ananassa HOM05D004588 ORTHO05D005365 8.2e-06 53.9 88 38.6
Psat0s11495g0040 Pisum sativum HOM05D004588 ORTHO05D005365 8.2e-06 53.9 88 37.5
Potri.018G150100 Populus trichocarpa HOM05D004588 ORTHO05D005365 8.2e-06 53.9 91 36.3
Sed0013564 Sechium edule HOM05D004588 ORTHO05D005365 8.2e-06 53.9 74 40.5


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