Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026196 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 7.2e-65 250.4 121 100.0
CSS0048064 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 7.2e-65 250.4 121 100.0
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 1.8e-44 182.6 101 85.1
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 7.7e-43 177.2 100 83.0
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 1.3e-42 176.4 101 79.2
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 7.2e-41 170.6 100 80.0
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 3.6e-40 168.3 100 75.0
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 5.2e-39 164.5 101 73.3
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 2.0e-38 162.5 102 77.5
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 5.7e-38 161.0 100 72.0
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 7.5e-38 160.6 100 72.0
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 2.8e-37 158.7 116 62.9
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 6.3e-37 157.5 101 68.3
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 8.3e-37 157.1 106 66.0
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 1.8e-36 156.0 99 71.7
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.4e-36 155.6 101 68.3
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 2.4e-36 155.6 99 70.7
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 3.1e-36 155.2 100 65.0
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 3.1e-36 155.2 100 69.0
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 1.6e-35 152.9 99 68.7
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 2.0e-35 152.5 106 63.2
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 2.7e-35 152.1 106 64.2
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 4.5e-35 151.4 101 65.3
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 5.9e-35 151.0 101 68.3
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 1.0e-34 150.2 101 67.3
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 1.7e-34 149.4 101 65.3
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 2.9e-34 148.7 99 65.7
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 3.8e-34 148.3 101 68.3
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 3.8e-34 148.3 100 64.0
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 8.6e-34 147.1 101 67.3
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 8.6e-34 147.1 111 61.3
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 8.6e-34 147.1 99 63.6
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 8.6e-34 147.1 101 65.3
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 1.5e-33 146.4 101 62.4
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 1.5e-33 146.4 101 66.3
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.5e-33 145.6 99 64.6
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 2.5e-33 145.6 101 64.4
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 3.3e-33 145.2 99 63.6
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.3e-33 145.2 99 63.6
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 3.3e-33 145.2 100 67.0
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 4.3e-33 144.8 99 68.7
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 4.3e-33 144.8 99 64.6
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 4.3e-33 144.8 99 62.6
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 5.6e-33 144.4 99 64.6
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 9.5e-33 143.7 99 63.6
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 9.5e-33 143.7 101 64.4
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 9.5e-33 143.7 100 68.0
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 1.6e-32 142.9 101 66.3
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 1.6e-32 142.9 101 66.3
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 1.6e-32 142.9 99 62.6
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 2.1e-32 142.5 101 66.3
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 2.1e-32 142.5 97 64.9
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.8e-32 142.1 99 63.6
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 2.8e-32 142.1 100 63.0
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 3.6e-32 141.7 100 63.0
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.0e-31 140.2 105 60.0
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 1.8e-31 139.4 101 59.4
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 1.8e-31 139.4 99 62.6
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 1.8e-31 139.4 99 62.6
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 2.3e-31 139.0 99 64.6
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 3.0e-31 138.7 101 64.4
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 3.0e-31 138.7 101 62.4
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 4.0e-31 138.3 99 61.6
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 5.2e-31 137.9 106 58.5
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 5.2e-31 137.9 105 60.0
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 5.2e-31 137.9 99 62.6
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 1.2e-30 136.7 99 60.6
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 1.2e-30 136.7 100 59.0
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 1.2e-30 136.7 101 60.4
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 3.4e-30 135.2 101 62.4
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 3.4e-30 135.2 101 58.4
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 5.7e-30 134.4 109 58.7
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 1.3e-29 133.3 113 54.9
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 1.3e-29 133.3 105 58.1
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 1.3e-29 133.3 101 60.4
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 1.3e-29 133.3 101 58.4
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 2.2e-29 132.5 99 59.6
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 2.9e-29 132.1 101 58.4
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 3.7e-29 131.7 99 58.6
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 4.9e-29 131.3 101 61.4
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 4.9e-29 131.3 101 59.4
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 4.1e-28 128.3 101 55.4
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 4.1e-28 128.3 101 57.4
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 1.6e-27 126.3 101 55.4
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 2.0e-27 125.9 101 55.4
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 2.0e-27 125.9 101 55.4
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 2.7e-27 125.6 101 56.4
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 1.0e-26 123.6 100 55.0
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 1.7e-26 122.9 100 56.0
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 2.3e-26 122.5 118 50.8
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 2.3e-26 122.5 101 52.5
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 2.3e-26 122.5 101 52.5
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 2.3e-26 122.5 101 52.5
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 2.3e-26 122.5 101 52.5
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 2.3e-26 122.5 101 52.5
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 2.3e-26 122.5 118 56.8
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 3.0e-26 122.1 118 50.8
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 3.0e-26 122.1 86 61.6
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 5.0e-26 121.3 101 53.5
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 5.0e-26 121.3 101 50.5
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 8.6e-26 120.6 101 54.5
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 1.5e-25 119.8 101 53.5
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 2.8e-24 115.5 101 53.5
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 4.0e-23 111.7 70 68.6
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 4.0e-23 111.7 102 49.0
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 5.2e-23 111.3 72 66.7
FAN01G0300 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.3e-18 96.7 100 51.0
FAN03G2347 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.5e-17 92.4 91 52.7
FAN03G3234 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.5e-17 92.4 91 52.7
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 1.5e-14 83.2 98 38.8
Actinidia34081 Actinidia chinensis HOM05D005908 ORTHO05D007235 4.6e-11 71.6 80 51.2
MD16G1250200 Malus domestica HOM05D005908 ORTHO05D007235 1.0e-10 70.5 52 61.5
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 5.6e-09 64.7 88 36.4
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 2.8e-08 62.4 60 50.0
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 1.5e-06 56.6 96 36.5
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 1.5e-06 56.6 96 36.5


User provided reference genes

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