Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 1.8e-81 305.8 155 100.0
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 6.6e-63 244.2 135 91.1
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.5e-59 233.0 135 88.9
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 5.8e-59 231.1 135 86.7
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.7e-58 229.6 135 87.4
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 3.7e-58 228.4 135 84.4
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 6.4e-58 227.6 135 86.7
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.9e-57 226.1 135 85.9
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 3.2e-57 225.3 135 86.7
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 4.1e-57 224.9 135 84.4
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.5e-56 221.9 134 84.3
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 6.0e-56 221.1 133 85.7
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 6.0e-56 221.1 134 83.6
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 6.0e-56 221.1 134 83.6
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 1.7e-55 219.5 134 82.8
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 2.3e-55 219.2 136 83.1
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 2.3e-55 219.2 147 80.3
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 3.9e-55 218.4 135 83.0
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.5e-54 215.7 136 84.6
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 3.3e-54 215.3 136 83.8
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.6e-54 214.5 132 84.1
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 7.3e-54 214.2 136 81.6
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.2e-53 213.4 135 83.0
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.2e-53 213.4 136 82.4
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 2.1e-53 212.6 135 83.0
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 2.1e-53 212.6 135 83.7
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 3.6e-53 211.8 135 81.5
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 3.6e-53 211.8 135 83.0
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 3.6e-53 211.8 135 81.5
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 4.7e-53 211.5 135 83.7
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 6.2e-53 211.1 150 76.7
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 6.2e-53 211.1 136 81.6
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 8.1e-53 210.7 135 80.7
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 8.1e-53 210.7 135 80.7
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 8.1e-53 210.7 136 81.6
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.1e-52 210.3 135 80.0
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 1.4e-52 209.9 137 83.2
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.4e-52 209.9 136 82.4
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.8e-52 209.5 134 83.6
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 1.8e-52 209.5 136 81.6
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 1.8e-52 209.5 131 82.4
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 3.1e-52 208.8 134 81.3
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 3.1e-52 208.8 135 82.2
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 4.0e-52 208.4 134 81.3
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 4.0e-52 208.4 134 81.3
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 4.0e-52 208.4 135 83.7
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 5.2e-52 208.0 135 81.5
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.2e-52 208.0 135 81.5
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 5.2e-52 208.0 137 80.3
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 6.8e-52 207.6 135 80.7
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 8.9e-52 207.2 135 80.7
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 8.9e-52 207.2 136 80.1
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 8.9e-52 207.2 135 80.7
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 1.2e-51 206.8 135 80.0
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 1.5e-51 206.5 136 81.6
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.5e-51 206.5 135 80.7
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.5e-51 206.5 135 80.7
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 1.5e-51 206.5 135 80.0
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 2.0e-51 206.1 171 66.1
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.0e-51 206.1 177 66.7
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 2.6e-51 205.7 136 80.9
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 2.6e-51 205.7 149 76.5
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 3.4e-51 205.3 136 80.9
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 3.4e-51 205.3 136 80.9
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.4e-51 205.3 141 77.3
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 3.4e-51 205.3 136 81.6
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 3.4e-51 205.3 135 80.0
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 4.4e-51 204.9 136 80.9
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.4e-51 204.9 136 82.4
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 4.4e-51 204.9 134 82.1
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 4.4e-51 204.9 134 82.1
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 4.4e-51 204.9 135 80.7
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 4.4e-51 204.9 136 80.1
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 4.4e-51 204.9 135 80.0
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 5.8e-51 204.5 135 80.0
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 5.8e-51 204.5 136 80.1
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 5.8e-51 204.5 135 80.0
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 5.8e-51 204.5 134 82.8
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 7.6e-51 204.1 136 80.9
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 7.6e-51 204.1 135 77.8
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 7.6e-51 204.1 135 77.0
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 7.6e-51 204.1 135 79.3
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 9.9e-51 203.8 136 80.1
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 9.9e-51 203.8 136 80.1
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 9.9e-51 203.8 136 80.1
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 9.9e-51 203.8 132 79.5
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 2.2e-50 202.6 133 80.5
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 2.9e-50 202.2 136 80.1
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 3.8e-50 201.8 136 80.1
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 3.8e-50 201.8 135 80.0
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.9e-50 201.4 136 79.4
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 6.4e-50 201.1 135 80.0
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 8.4e-50 200.7 137 79.6
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 1.1e-49 200.3 135 80.0
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 1.4e-49 199.9 135 77.8
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 1.4e-49 199.9 135 79.3
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.9e-49 199.5 136 79.4
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.9e-49 199.5 136 79.4
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.9e-49 199.5 136 79.4
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.9e-49 199.5 136 79.4
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.9e-49 199.5 136 79.4
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.9e-49 199.5 133 78.9
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 2.4e-49 199.1 136 79.4
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 2.4e-49 199.1 135 77.8
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.2e-49 198.4 136 78.7
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 4.2e-49 198.4 136 78.7
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 7.1e-49 197.6 136 78.7
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 9.2e-49 197.2 137 78.1
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.2e-48 196.8 136 77.9
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.1e-48 196.1 135 78.5
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 2.1e-48 196.1 132 80.3
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 2.7e-48 195.7 133 77.4
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 4.6e-48 194.9 135 77.8
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 7.8e-48 194.1 135 77.8
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 1.0e-47 193.7 135 77.0
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 3.9e-47 191.8 135 76.3
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 3.9e-47 191.8 135 75.6
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 5.1e-47 191.4 133 77.4
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 1.5e-46 189.9 136 74.3
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 1.5e-46 189.9 135 77.8
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 3.3e-46 188.7 173 64.2
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 3.3e-46 188.7 133 75.9
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 3.3e-46 188.7 135 75.6
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 4.3e-46 188.3 94 98.9
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 9.6e-46 187.2 132 72.7
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 1.3e-45 186.8 132 76.5
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 8.1e-45 184.1 135 74.8
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 8.1e-45 184.1 135 74.8
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 8.1e-45 184.1 135 74.8
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.1e-44 183.7 135 74.8
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 3.1e-44 182.2 133 75.2
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.0e-44 181.8 136 73.5
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 6.9e-44 181.0 134 73.9
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 9.0e-44 180.6 135 74.8
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 9.0e-44 180.6 136 74.3
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 9.0e-44 180.6 136 74.3
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.5e-43 179.9 143 69.2
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 2.0e-43 179.5 135 72.6
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.0e-43 179.5 134 73.1
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.4e-43 178.3 111 83.8
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 4.4e-43 178.3 129 73.6
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 7.6e-43 177.6 135 72.6
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.3e-42 176.8 135 71.9
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.7e-42 176.4 134 72.4
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 2.2e-42 176.0 117 78.6
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 2.2e-42 176.0 132 72.0
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 2.2e-42 176.0 95 88.4
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.9e-42 175.6 143 68.5
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 6.4e-42 174.5 119 79.0
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 1.2e-40 170.2 122 76.2
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 3.0e-39 165.6 114 78.9
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.1e-38 163.7 131 65.6
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 4.3e-38 161.8 90 87.8
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 7.3e-38 161.0 131 65.6
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 3.1e-36 155.6 113 76.1
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 2.2e-34 149.4 111 76.6
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 1.9e-33 146.4 111 73.9
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 4.2e-33 145.2 136 63.2
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 8.7e-31 137.5 77 83.1
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 1.9e-30 136.3 111 68.5
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.9e-30 136.3 121 60.3
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 4.3e-30 135.2 126 58.7
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.3e-30 135.2 95 78.9
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 3.7e-29 132.1 89 80.9
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.4e-28 129.4 133 57.1
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.0e-26 124.0 109 65.1
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.0e-26 124.0 109 65.1
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 6.5e-26 121.3 69 82.6
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.5e-25 118.2 64 87.5
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 6.0e-24 114.8 114 57.9
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 1.8e-23 113.2 114 55.3
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.1e-22 110.5 133 52.6
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 1.5e-22 110.2 94 70.2
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 1.3e-21 107.1 89 69.7
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.4e-20 103.6 75 76.0
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 5.3e-20 101.7 83 63.9
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-18 97.1 74 73.0
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 2.2e-18 96.3 82 69.5
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 2.9e-18 95.9 75 70.7
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 1.1e-17 94.0 45 93.3
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 2.3e-15 86.3 74 68.9
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 6.3e-13 78.2 80 56.2
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.5e-09 66.2 35 94.3


User provided reference genes

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