Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 0.0e+00 1159.8 832 100.0
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 0.0e+00 1078.5 832 94.0
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 2.6e-190 669.8 845 60.5
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 2.9e-181 639.8 843 63.9
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 7.4e-161 572.0 840 56.5
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 6.7e-154 548.9 843 51.1
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 4.5e-150 536.2 531 60.1
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 5.0e-149 532.7 838 56.4
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 8.5e-149 531.9 507 60.9
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 7.2e-148 528.9 532 59.6
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 2.3e-146 523.9 532 59.2
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 8.8e-146 521.9 529 59.2
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 3.1e-143 513.5 850 51.3
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 1.6e-142 511.1 530 58.1
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 5.9e-142 509.2 530 58.7
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 9.4e-140 501.9 530 58.3
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 1.5e-137 494.6 845 50.8
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 4.8e-136 489.6 837 49.7
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 4.8e-136 489.6 853 47.7
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 5.4e-135 486.1 529 57.3
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 7.0e-135 485.7 515 57.3
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.0e-134 484.2 531 56.5
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 4.5e-134 483.0 530 56.8
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 8.5e-133 478.8 649 66.7
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 8.5e-133 478.8 531 55.7
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.5e-132 477.2 530 56.0
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 1.2e-131 474.9 839 50.7
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.1e-131 474.2 531 55.9
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 6.1e-131 472.6 516 55.8
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 1.4e-130 471.5 524 54.4
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.8e-130 471.1 839 50.5
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 1.7e-128 464.5 512 55.5
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 1.8e-127 461.1 517 55.3
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 9.1e-127 458.8 537 54.7
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 4.5e-126 456.4 523 53.3
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 2.9e-125 453.8 522 52.9
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 2.5e-124 450.7 524 55.0
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 2.1e-123 447.6 530 53.0
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 4.7e-123 446.4 518 52.9
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 1.4e-122 444.9 521 53.4
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 6.8e-122 442.6 525 50.9
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 1.2e-121 441.8 521 53.0
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 7.5e-121 439.1 524 53.1
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 1.7e-120 438.0 860 52.7
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 5.4e-119 433.0 546 52.0
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 1.6e-118 431.4 505 54.7
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 2.0e-118 431.0 868 53.9
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 3.5e-118 430.3 524 51.7
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 1.0e-117 428.7 877 55.0
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 5.0e-117 426.4 517 53.6
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 5.0e-117 426.4 859 51.9
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 4.3e-116 423.3 528 53.4
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 1.0e-114 418.7 854 51.3
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 1.1e-111 408.7 427 56.2
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 7.0e-111 406.0 631 46.4
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 7.0e-111 406.0 859 52.0
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 1.6e-110 404.8 523 48.4
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 1.6e-110 404.8 845 45.4
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 8.6e-109 399.1 528 49.8
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 2.5e-108 397.5 427 58.3
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 4.3e-108 396.7 528 49.6
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 4.0e-106 390.2 569 47.3
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 1.2e-105 388.7 834 49.5
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 1.2e-105 388.7 573 46.2
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 4.1e-103 380.2 527 45.9
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 1.3e-101 375.2 401 57.4
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 5.1e-101 373.2 491 49.7
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 1.9e-100 371.3 529 46.7
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 9.5e-100 369.0 561 44.9
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 3.6e-99 367.1 594 45.3
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 4.4e-97 360.1 518 45.6
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 1.3e-96 358.6 528 46.8
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 8.6e-93 345.9 525 45.9
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 1.9e-92 344.7 497 47.1
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 1.2e-89 335.5 384 53.9
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 7.6e-89 332.8 244 73.0
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 6.6e-85 319.7 531 44.4
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 3.3e-84 317.4 528 43.0
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 4.3e-84 317.0 528 44.1
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 8.1e-83 312.8 528 43.8
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 3.1e-82 310.8 531 43.7
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 5.3e-82 310.1 529 42.5
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 9.0e-82 309.3 531 43.1
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 2.0e-81 308.1 723 49.1
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 1.6e-78 298.5 529 43.1
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 4.6e-78 297.0 530 41.7
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 4.6e-78 297.0 530 43.0
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 6.6e-77 293.1 591 41.3
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 9.6e-76 289.3 530 42.6
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 9.6e-76 289.3 530 41.3
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 3.1e-74 284.3 500 41.0
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 1.9e-71 275.0 561 37.8
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 1.8e-69 268.5 562 38.4
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 4.8e-67 260.4 503 41.4
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 5.3e-66 256.9 590 38.3
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 2.9e-64 251.1 493 38.9
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 4.5e-57 227.3 199 64.8
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 8.4e-56 223.0 875 32.3
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 3.0e-53 214.5 641 32.3
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 6.9e-42 176.8 291 42.3
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 9.1e-42 176.4 555 33.7
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 6.1e-30 137.1 603 28.5
Actinidia02676 Actinidia chinensis HOM05D000736 ORTHO05D008027 2.2e-16 92.0 130 47.7
Actinidia32261 Actinidia chinensis HOM05D006512 ORTHO05D008027 9.8e-12 76.6 101 48.5
Nn6g32350 Nelumbo nucifera HOM05D006512 ORTHO05D008027 8.3e-11 73.6 162 40.1
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-08 66.2 81 43.2
Cpa.g.c37452 Carica papaya HOM05D006512 ORTHO05D008027 1.5e-07 62.8 69 59.4
PRCOL_00002654 Prasinoderma coloniale HOM05D002594 ORTHO05D003499 7.3e-07 60.5 55 45.5


User provided reference genes

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