Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 9.5e-161 570.1 281 100.0
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 4.7e-160 567.8 281 99.6
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 2.7e-107 392.5 277 73.6
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 7.2e-100 367.9 274 70.4
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 4.1e-95 352.1 274 67.5
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 1.1e-92 344.0 276 65.2
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 1.2e-91 340.5 276 64.5
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 9.7e-89 330.9 275 65.5
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 3.3e-81 305.8 272 62.9
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 2.2e-80 303.1 271 60.9
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 2.8e-80 302.8 271 60.9
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 3.7e-80 302.4 274 61.7
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 1.7e-77 293.5 275 60.0
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 1.7e-77 293.5 272 58.8
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 1.5e-76 290.4 258 61.2
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 4.2e-76 288.9 274 58.4
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 5.5e-76 288.5 272 59.2
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 6.1e-75 285.0 282 57.1
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 1.0e-74 284.3 273 59.0
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 5.2e-74 282.0 276 57.6
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 1.2e-73 280.8 274 59.5
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 9.8e-73 277.7 290 60.0
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 2.2e-72 276.6 209 63.6
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 4.8e-72 275.4 276 56.5
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 8.3e-72 274.6 274 54.4
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 1.2e-70 270.8 275 59.3
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 1.6e-70 270.4 274 55.5
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 2.0e-70 270.0 278 57.2
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 2.7e-70 269.6 276 56.5
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 3.5e-70 269.2 271 56.8
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 4.5e-70 268.9 271 53.9
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 4.5e-70 268.9 181 71.8
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 5.9e-70 268.5 273 54.2
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 1.0e-69 267.7 280 55.7
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 1.7e-69 266.9 278 57.6
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 5.0e-69 265.4 183 74.3
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 8.6e-69 264.6 277 55.2
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.1e-68 264.2 268 55.6
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 1.1e-68 264.2 271 55.7
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 1.5e-68 263.8 271 56.1
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 1.9e-68 263.5 213 64.8
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 1.9e-68 263.5 274 56.9
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 2.5e-68 263.1 272 55.1
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 3.6e-67 259.2 280 53.6
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 4.0e-66 255.8 272 51.5
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 3.4e-65 252.7 272 54.4
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 3.4e-65 252.7 275 52.7
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 9.8e-65 251.1 280 53.6
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 9.8e-65 251.1 174 69.5
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 1.8e-63 246.9 206 62.6
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 3.1e-63 246.1 179 69.3
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 3.1e-63 246.1 189 66.7
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 7.0e-63 245.0 188 66.0
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 9.2e-63 244.6 250 56.8
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 9.2e-63 244.6 250 56.8
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 2.0e-62 243.4 190 65.3
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 4.5e-62 242.3 226 57.5
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 7.8e-62 241.5 275 51.6
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 5.0e-61 238.8 171 69.0
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 1.5e-60 237.3 283 49.5
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 1.9e-60 236.9 274 51.1
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 3.3e-60 236.1 180 66.7
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 4.3e-60 235.7 274 50.4
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 4.3e-60 235.7 278 51.1
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 1.6e-59 233.8 235 56.2
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 2.1e-59 233.4 194 63.9
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 2.1e-59 233.4 273 51.3
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 2.1e-59 233.4 204 60.3
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 4.7e-59 232.3 173 68.2
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 4.7e-59 232.3 185 65.9
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 6.1e-59 231.9 154 72.7
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 1.0e-58 231.1 208 58.7
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 2.3e-58 229.9 155 72.3
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 3.0e-58 229.6 191 61.8
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 3.0e-58 229.6 185 64.9
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 5.2e-58 228.8 185 62.7
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 6.8e-58 228.4 273 50.2
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 6.8e-58 228.4 154 73.4
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 8.9e-58 228.0 171 67.8
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 1.2e-57 227.6 275 50.5
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 1.2e-57 227.6 190 60.0
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 2.6e-57 226.5 272 49.3
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 2.6e-57 226.5 135 77.0
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 4.4e-57 225.7 273 49.1
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 4.4e-57 225.7 270 49.3
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 5.7e-57 225.3 273 48.7
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 7.5e-57 224.9 273 48.4
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 3.7e-56 222.6 219 56.2
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 4.6e-54 215.7 151 69.5
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 6.0e-54 215.3 274 48.9
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 3.0e-53 213.0 169 63.9
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 3.0e-53 213.0 206 54.9
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 8.6e-53 211.5 206 54.4
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 1.2e-51 207.6 230 52.2
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.8e-50 203.8 346 39.6
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 4.4e-49 199.1 271 47.2
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 7.5e-49 198.4 222 51.8
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 1.4e-47 194.1 185 53.0
MD07G1179900 Malus domestica HOM05D006539 ORTHO05D008694 2.3e-42 176.8 223 49.8
MD11G1144500 Malus domestica HOM05D006539 ORTHO05D008694 9.2e-39 164.9 231 46.8
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 9.2e-39 164.9 185 48.6
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 7.8e-38 161.8 146 54.1
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 3.0e-37 159.8 138 55.8
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 1.9e-36 157.1 195 43.6
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 1.5e-33 147.5 137 49.6
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 4.4e-33 146.0 132 53.0
SMO116G0014 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 3.0e-29 133.3 137 46.7
HPP92_013416 Vanilla planifolia HOM05D006539 ORTHO05D008694 9.0e-26 121.7 104 62.5
QL02p073354 Quercus lobata HOM05D006539 ORTHO05D008694 7.6e-25 118.6 149 53.0
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 3.2e-23 113.2 133 38.3
AUR62044515 Chenopodium quinoa HOM05D006539 ORTHO05D008694 2.0e-17 94.0 50 80.0
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 9.9e-17 91.7 139 36.0
MCO16G092 Micromonas commoda HOM05D006539 ORTHO05D008694 3.8e-16 89.7 125 36.8
HPP92_013415 Vanilla planifolia HOM05D006539 ORTHO05D008694 3.2e-15 86.7 50 72.0
FAN02G0136 Fragaria x ananassa HOM05D006539 ORTHO05D008694 2.0e-09 67.4 35 80.0
MD07G1180000 Malus domestica HOM05D006539 ORTHO05D248072 2.0e-09 67.4 34 79.4


User provided reference genes

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