Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047728 Camellia sinensis var. sinensis HOM05D006277 ORTHO05D007673 9.6e-183 643.7 397 100.0
vmacro06474 Vaccinium macrocarpon HOM05D006277 ORTHO05D007673 4.5e-116 422.2 432 60.9
Rhsim03G0218400 Rhododendron simsii HOM05D006277 ORTHO05D007673 2.2e-110 403.3 412 61.2
Dinv29192 Davidia involucrata HOM05D006277 ORTHO05D007673 2.0e-103 380.2 429 58.3
GSVIVG01038680001 Vitis vinifera HOM05D006277 ORTHO05D007673 3.6e-89 332.8 435 52.2
QL09p006002 Quercus lobata HOM05D006277 ORTHO05D007673 6.4e-86 322.0 451 49.9
Atru.chr12.2501 Acer truncatum HOM05D006277 ORTHO05D007673 1.5e-82 310.8 416 57.0
Thecc.03G212000 Theobroma cacao HOM05D006277 ORTHO05D007673 1.2e-81 307.8 429 51.7
Gohir.A08G106400 Gossypium hirsutum HOM05D006277 ORTHO05D007673 2.3e-80 303.5 430 48.8
COL.COLO4_14399 Corchorus olitorius HOM05D006277 ORTHO05D007673 2.9e-78 296.6 429 52.2
Gorai.004G126300 Gossypium raimondii HOM05D006277 ORTHO05D007673 2.9e-78 296.6 428 49.1
Actinidia08720 Actinidia chinensis HOM05D006277 ORTHO05D007673 1.4e-77 294.3 293 61.8
Manes.18G108300 Manihot esculenta HOM05D006277 ORTHO05D007673 4.1e-77 292.7 430 47.0
Potri.012G004700 Populus trichocarpa HOM05D006277 ORTHO05D007673 2.1e-76 290.4 428 49.1
Duzib205G1288 Durio zibethinus HOM05D006277 ORTHO05D007673 4.6e-76 289.3 400 50.5
EL10Ac3g05132 Beta vulgaris HOM05D006277 ORTHO05D007673 1.7e-75 287.3 415 50.4
Atru.chr12.2525 Acer truncatum HOM05D006277 ORTHO05D007673 1.5e-74 284.3 415 51.6
Glyma.06G139100 Glycine max HOM05D006277 ORTHO05D007673 1.9e-74 283.9 434 46.3
Sabra12G0000500 Salix brachista HOM05D006277 ORTHO05D007673 5.6e-74 282.3 440 48.0
Haze_00334 Corylus avellana HOM05D006277 ORTHO05D007673 9.6e-74 281.6 521 43.2
CiPaw.06G038300 Carya illinoinensis HOM05D006277 ORTHO05D007673 1.2e-73 281.2 371 52.8
Cpa.g.sc3.186 Carica papaya HOM05D006277 ORTHO05D007673 1.6e-73 280.8 417 48.2
TAR626G1328 Trochodendron aralioides HOM05D006277 ORTHO05D007673 2.1e-73 280.4 402 47.5
Sabra12G0006800 Salix brachista HOM05D006277 ORTHO05D007673 1.4e-72 277.7 440 47.5
MSTRG.26953 Avicennia marina HOM05D006277 ORTHO05D007673 1.8e-72 277.3 436 46.1
Sc19g0000370 Simmondsia chinensis HOM05D006277 ORTHO05D007673 1.2e-71 274.6 426 48.1
FAN10G3443 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.5e-71 274.2 431 49.7
FAN01G0327 Fragaria x ananassa HOM05D006277 ORTHO05D007673 4.4e-71 272.7 431 48.5
MD01G1231400 Malus domestica HOM05D006277 ORTHO05D007673 7.6e-71 271.9 400 50.0
PGSC0003DMG400000548 Solanum tuberosum HOM05D006277 ORTHO05D007673 7.6e-71 271.9 422 47.4
FvH4_7g33320 Fragaria vesca HOM05D006277 ORTHO05D007673 9.9e-71 271.6 431 49.4
Cc02_g00600 Coffea canephora HOM05D006277 ORTHO05D007673 2.2e-70 270.4 402 50.0
FAN10G1913 Fragaria x ananassa HOM05D006277 ORTHO05D007673 2.2e-70 270.4 431 48.3
Phvul.009G040200 Phaseolus vulgaris HOM05D006277 ORTHO05D007673 8.4e-70 268.5 443 45.4
Migut.F00123 Erythranthe guttata HOM05D006277 ORTHO05D007673 2.4e-69 266.9 432 45.1
THA.LOC104803317 Tarenaya hassleriana HOM05D006277 ORTHO05D007673 2.4e-69 266.9 426 46.9
AUR62005949 Chenopodium quinoa HOM05D006277 ORTHO05D007673 7.1e-69 265.4 397 47.9
AUR62028116 Chenopodium quinoa HOM05D006277 ORTHO05D007673 6.0e-68 262.3 403 49.1
CANSAT21G1902 Cannabis sativa HOM05D006277 ORTHO05D007673 7.8e-68 261.9 399 46.4
CAN.G303.58 Capsicum annuum HOM05D006277 ORTHO05D007673 1.3e-67 261.2 422 46.2
VMungo1309G1324 Vigna mungo HOM05D006277 ORTHO05D007673 1.3e-67 261.2 437 43.2
RcHm_v2.0_Chr1g0383301 Rosa chinensis HOM05D006277 ORTHO05D007673 3.9e-67 259.6 447 46.5
TWI59G0797 Tripterygium wilfordii HOM05D006277 ORTHO05D007673 8.7e-67 258.5 252 58.7
Sopen03g027470 Solanum pennellii HOM05D006277 ORTHO05D007673 1.9e-66 257.3 422 45.0
Glyma.04G225700 Glycine max HOM05D006277 ORTHO05D007673 2.5e-66 256.9 405 47.2
Hund09753 Selenicereus undatus HOM05D006277 ORTHO05D007673 2.5e-66 256.9 374 46.3
Lj1g0014471 Lotus japonicus HOM05D006277 ORTHO05D007673 6.2e-65 252.3 439 44.4
Ca_16838_v3 Cicer arietinum L. HOM05D006277 ORTHO05D007673 3.1e-64 250.0 447 43.2
Lalb_Chr23g0272041 Lupinus albus HOM05D006277 ORTHO05D007673 5.3e-64 249.2 440 44.5
PGR142G2769 Punica granatum HOM05D006277 ORTHO05D007673 4.4e-63 246.1 430 43.5
MD07G1303400 Malus domestica HOM05D006277 ORTHO05D007673 7.6e-63 245.4 400 46.5
Solyc03g079950.4 Solanum lycopersicum HOM05D006277 ORTHO05D007673 2.9e-62 243.4 417 47.5
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea HOM05D006277 ORTHO05D007673 3.8e-62 243.0 441 44.9
Nitab4.5_0000021g0190 Nicotiana tabacum HOM05D006277 ORTHO05D007673 3.8e-62 243.0 335 50.1
SalBow4G0692 Salvia bowleyana HOM05D006277 ORTHO05D007673 8.4e-62 241.9 436 42.7
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea HOM05D006277 ORTHO05D007673 1.1e-61 241.5 441 44.7
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea HOM05D006277 ORTHO05D007673 1.1e-61 241.5 441 44.2
Prupe.2G322100 Prunus persica HOM05D006277 ORTHO05D007673 7.1e-61 238.8 401 45.1
Nitab4.5_0007121g0020 Nicotiana tabacum HOM05D006277 ORTHO05D007673 1.2e-60 238.0 391 46.3
Thhalv10004336m.g Eutrema salsugineum HOM05D006277 ORTHO05D007673 1.6e-60 237.7 427 43.6
Medtr3g093330 Medicago truncatula HOM05D006277 ORTHO05D007673 1.6e-60 237.7 441 42.2
Os02g0147700 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 1.6e-60 237.7 359 42.9
Os02g0147100 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 7.9e-60 235.3 335 44.5
TPR.G35912 Trifolium pratense HOM05D006277 ORTHO05D007673 1.0e-59 235.0 448 42.9
Sp2g22750 Schrenkiella parvula HOM05D006277 ORTHO05D007673 1.7e-59 234.2 426 43.9
BcaNung02006 Brassica carinata HOM05D006277 ORTHO05D007673 5.1e-59 232.6 422 43.4
Peaxi162Scf01026g00268 Petunia axillaris HOM05D006277 ORTHO05D007673 8.7e-59 231.9 419 44.6
Lsat_1_v5_gn_2_135460 Lactuca sativa HOM05D006277 ORTHO05D007673 1.1e-58 231.5 329 49.8
SGA_v2.0_scaffold18G08496 Striga asiatica HOM05D006277 ORTHO05D007673 1.1e-58 231.5 458 43.9
Psat6g243000 Pisum sativum HOM05D006277 ORTHO05D007673 4.3e-58 229.6 399 42.9
Cfa016128 Carpinus fangiana HOM05D006277 ORTHO05D007673 5.6e-58 229.2 333 48.9
Ciclev10005393m.g Citrus clementina HOM05D006277 ORTHO05D007673 5.6e-58 229.2 291 49.8
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 1.3e-57 228.0 402 44.8
C07p43080 Brassica napus HOM05D006277 ORTHO05D007673 1.4e-56 224.6 434 42.2
Carub.0006s2249 Capsella rubella HOM05D006277 ORTHO05D007673 1.4e-56 224.6 426 42.5
BolC7t44835H Brassica oleracea HOM05D006277 ORTHO05D007673 1.8e-56 224.2 434 42.2
Aa31LG11G3890 Aethionema arabicum HOM05D006277 ORTHO05D007673 4.0e-56 223.0 442 45.7
AUR62030650 Chenopodium quinoa HOM05D006277 ORTHO05D007673 4.0e-56 223.0 204 64.7
ECA238G0260 Erigeron canadensis HOM05D006277 ORTHO05D007673 6.9e-56 222.2 204 63.7
CARHR188820 Cardamine hirsuta HOM05D006277 ORTHO05D007673 9.0e-56 221.9 359 47.9
MBI16_g10337_MAGBIO Magnolia biondii HOM05D006277 ORTHO05D007673 3.4e-55 219.9 403 41.7
FAN03G1266 Fragaria x ananassa HOM05D006277 ORTHO05D007673 2.9e-54 216.9 349 45.3
HanXRQChr04g0117941 Helianthus annuus HOM05D006277 ORTHO05D007673 2.9e-54 216.9 197 63.5
ClCG07G009750 Citrullus lanatus HOM05D006277 ORTHO05D007673 3.8e-54 216.5 412 42.2
Sed0010003 Sechium edule HOM05D006277 ORTHO05D007673 8.4e-54 215.3 403 41.4
Eucgr.K00479 Eucalyptus grandis HOM05D006277 ORTHO05D007673 1.4e-53 214.5 363 44.6
A06p35430 Brassica napus HOM05D006277 ORTHO05D007673 3.2e-53 213.4 435 45.3
CsaV3_2G019700 Cucumis sativus L. HOM05D006277 ORTHO05D007673 1.6e-52 211.1 415 41.7
LjContig00312_ERROPOS870357g0003049 Lotus japonicus HOM05D006277 ORTHO05D007673 6.0e-52 209.1 284 49.6
PSO063G0207 Papaver somniferum HOM05D006277 ORTHO05D007673 7.9e-52 208.8 391 41.2
BraA06t26466Z Brassica rapa HOM05D006277 ORTHO05D007673 3.9e-51 206.5 445 44.3
PSO170G0956 Papaver somniferum HOM05D006277 ORTHO05D007673 6.7e-51 205.7 391 46.0
Aqoxy7G02781 Aquilegia oxysepala HOM05D006277 ORTHO05D007673 1.1e-50 204.9 396 41.7
HPP92_017116 Vanilla planifolia HOM05D006277 ORTHO05D007673 1.3e-49 201.4 393 38.2
DCAR_010558 Daucus carota HOM05D006277 ORTHO05D007673 3.7e-49 199.9 427 41.7
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea HOM05D006277 ORTHO05D007673 8.1e-49 198.7 244 50.8
Gohir.D08G117800 Gossypium hirsutum HOM05D006277 ORTHO05D007673 5.3e-48 196.1 321 44.5
Oeu010718.2 Olea europaea HOM05D006277 ORTHO05D007673 9.0e-48 195.3 521 35.3
HPP92_017121 Vanilla planifolia HOM05D006277 ORTHO05D007673 2.6e-47 193.7 340 40.0
CDE02G3091 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 1.3e-46 191.4 398 40.2
PSO384G3009 Papaver somniferum HOM05D006277 ORTHO05D007673 2.2e-46 190.7 382 40.6
SEGI_26440 Sequoiadendron giganteum HOM05D006277 ORTHO05D007673 2.5e-45 187.2 396 37.6
BcaNung01248 Brassica carinata HOM05D006277 ORTHO05D007673 3.2e-45 186.8 422 39.1
AL6G36240 Arabidopsis lyrata HOM05D006277 ORTHO05D007673 2.1e-44 184.1 474 35.7
ATR0626G063 Amborella trichopoda HOM05D006277 ORTHO05D007673 1.8e-43 181.0 396 38.1
Zm00001eb232230 Zea mays HOM05D006277 ORTHO05D007673 6.7e-43 179.1 236 46.6
AT5G24630 Arabidopsis thaliana HOM05D006277 ORTHO05D007673 1.1e-42 178.3 465 37.2
MELO3C023191.2 Cucumis melo HOM05D006277 ORTHO05D007673 4.3e-42 176.4 375 40.0
Nn7g37003 Nelumbo nucifera HOM05D006277 ORTHO05D007673 1.2e-39 168.3 301 42.9
PSO384G0555 Papaver somniferum HOM05D006277 ORTHO05D007673 2.5e-37 160.6 158 56.3
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 7.9e-36 155.6 175 54.3
arahy.Tifrunner.gnm1.ann1.Z5WHM0 Arachis hypogaea HOM05D006277 ORTHO05D007673 3.3e-34 150.2 384 38.5
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 3.3e-34 150.2 171 52.0
A09p06430 Brassica napus HOM05D000010 ORTHO05D000063 1.6e-33 147.9 201 48.8
C09p07160 Brassica napus HOM05D000010 ORTHO05D000063 2.0e-31 141.0 350 44.0
Pp3c7_3940 Physcomitrium patens HOM05D006277 ORTHO05D007673 2.9e-30 137.1 139 48.2
Pp3c11_21910 Physcomitrium patens HOM05D006277 ORTHO05D007673 2.5e-29 134.0 140 47.1
Potri.015G000701 Populus trichocarpa HOM05D006277 ORTHO05D007673 2.0e-26 124.4 93 69.9
CBR_g24064 Chara braunii HOM05D006277 ORTHO05D007673 2.8e-25 120.6 119 52.1
Mapoly0143s0029 Marchantia polymorpha HOM05D006277 ORTHO05D007673 8.2e-25 119.0 419 29.1
CBR_g39579 Chara braunii HOM05D000601 ORTHO05D007673 2.6e-23 114.0 110 50.9
Hma1.2p1_1235F.1_g269240 Hydrangea macrophylla HOM05D006277 ORTHO05D007673 1.7e-22 111.3 188 46.8
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis HOM05D006277 ORTHO05D007673 3.2e-21 107.1 373 37.0
CBR_g31160 Chara braunii HOM05D006277 ORTHO05D007673 5.5e-21 106.3 117 47.0
CDE06G1557 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 9.4e-21 105.5 304 34.5
CiPaw.10G123600 Carya illinoinensis HOM05D006277 ORTHO05D007673 3.8e-14 83.6 45 86.7
Nn5g26949 Nelumbo nucifera HOM05D006277 ORTHO05D007673 6.1e-12 76.3 49 75.5
MCO04G384 Micromonas commoda HOM05D006277 ORTHO05D007673 1.1e-10 72.0 119 36.1


User provided reference genes

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