Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 2.3e-176 622.1 303 100.0
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 4.6e-153 544.7 305 87.5
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 9.6e-143 510.4 306 80.4
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 7.9e-137 490.7 303 78.9
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 2.5e-135 485.7 310 77.7
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 5.7e-135 484.6 322 76.1
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 2.2e-134 482.6 299 78.6
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 6.5e-131 471.1 297 75.8
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 4.2e-130 468.4 304 76.0
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 4.2e-130 468.4 299 74.6
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 4.2e-130 468.4 308 71.8
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 3.9e-128 461.8 309 73.5
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.1e-127 460.3 305 74.1
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 2.6e-127 459.1 302 73.5
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 4.4e-127 458.4 297 73.4
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.7e-126 456.4 302 73.2
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 3.7e-126 455.3 297 72.7
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 4.8e-126 454.9 306 72.9
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 6.3e-126 454.5 295 71.5
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 6.3e-126 454.5 303 72.3
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 1.1e-125 453.8 302 72.5
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 1.1e-125 453.8 302 72.5
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.4e-125 453.4 295 71.9
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 3.1e-125 452.2 296 72.6
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 3.1e-125 452.2 290 72.8
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 4.1e-125 451.8 298 72.8
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 6.9e-125 451.1 303 71.3
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 9.1e-125 450.7 295 70.8
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 9.1e-125 450.7 312 69.2
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.2e-124 450.3 301 74.4
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.0e-124 449.5 295 70.8
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 2.0e-124 449.5 297 71.0
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.6e-124 449.1 296 72.3
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 2.6e-124 449.1 298 71.8
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 3.4e-124 448.7 305 69.8
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 4.5e-124 448.4 292 72.6
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 2.9e-123 445.7 293 71.0
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.8e-123 445.3 298 70.8
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 3.8e-123 445.3 305 70.8
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 5.0e-123 444.9 296 71.6
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 1.1e-122 443.7 298 70.8
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 3.2e-122 442.2 300 70.3
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 5.5e-122 441.4 317 66.6
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 7.2e-122 441.0 295 70.5
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 9.4e-122 440.7 304 70.4
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 1.2e-121 440.3 304 69.1
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 2.1e-121 439.5 295 71.9
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 2.7e-121 439.1 298 70.8
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 4.7e-121 438.3 302 68.9
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 6.1e-121 438.0 294 71.1
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 1.8e-120 436.4 301 67.8
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 1.8e-120 436.4 295 70.5
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 1.8e-120 436.4 295 69.2
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 3.9e-120 435.3 302 69.9
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 6.7e-120 434.5 306 68.3
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 8.8e-120 434.1 298 70.1
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 1.5e-119 433.3 292 70.5
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 1.5e-119 433.3 292 73.3
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 2.0e-119 433.0 302 69.2
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 4.4e-119 431.8 298 70.1
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 5.7e-119 431.4 295 70.8
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 7.4e-119 431.0 298 69.5
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 1.7e-118 429.9 298 70.1
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.7e-118 429.9 308 69.2
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 3.7e-118 428.7 293 68.9
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 8.2e-118 427.6 307 68.7
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 1.8e-117 426.4 297 68.4
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 3.5e-116 422.2 301 66.8
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 4.5e-116 421.8 296 68.2
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 7.7e-116 421.0 294 68.4
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 2.2e-115 419.5 298 70.5
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 2.9e-115 419.1 301 66.4
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 1.1e-114 417.2 297 67.7
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 2.5e-114 416.0 294 66.0
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.5e-114 414.8 295 66.8
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 7.2e-114 414.5 299 64.5
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.7e-113 411.8 296 67.6
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 4.7e-113 411.8 302 67.5
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 5.0e-107 391.7 307 66.1
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 1.8e-104 383.3 302 61.9
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 3.0e-104 382.5 243 77.4
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 8.3e-102 374.4 284 67.3
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 1.1e-101 374.0 299 60.5
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 8.6e-99 364.4 298 58.1
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 4.0e-96 355.5 304 59.9
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 2.6e-95 352.8 257 66.5
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 3.5e-92 342.4 230 71.3
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 2.8e-89 332.8 231 71.0
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 8.0e-89 331.3 230 70.9
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.0e-88 329.3 295 56.9
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 1.8e-85 320.1 421 41.8
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 5.9e-84 315.1 208 75.5
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 2.5e-82 309.7 272 56.6
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 1.3e-78 297.4 259 59.1
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 1.9e-77 293.5 227 66.5
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 3.3e-74 282.7 191 69.6
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 7.5e-71 271.6 297 47.8
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.4e-69 266.5 302 49.3
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.5e-68 262.7 198 64.1
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 6.2e-65 251.9 165 67.3
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 1.1e-64 251.1 139 82.7
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.5e-63 247.3 253 52.2
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.3e-58 229.6 297 45.8
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 3.6e-57 226.1 168 67.3
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 6.2e-57 225.3 182 64.3
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 3.1e-56 223.0 124 79.0
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 4.4e-55 219.2 159 66.7
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 1.2e-52 211.1 168 62.5
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 1.2e-52 211.1 127 73.2
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 1.2e-52 211.1 127 73.2
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 1.2e-52 211.1 127 73.2
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 5.8e-47 192.2 160 61.9
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 3.5e-44 183.0 127 65.4
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 6.7e-43 178.7 103 73.8
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.1e-41 173.7 163 58.9
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 3.1e-40 169.9 126 73.0
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.2e-38 163.7 129 62.0
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 1.7e-30 137.5 99 69.7
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.3e-26 123.2 104 61.5
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.7e-26 122.5 103 62.1
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.7e-26 122.5 103 62.1
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 8.2e-25 118.6 86 69.8
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.4e-24 117.1 103 58.3
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 1.2e-23 114.8 139 47.5
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.6e-20 103.2 88 60.2
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 5.7e-18 95.9 74 63.5
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 5.0e-14 82.8 152 34.9
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.3e-11 73.9 54 64.8
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.3e-10 70.1 44 75.0
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 9.7e-10 68.6 67 53.7
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 4.8e-09 66.2 67 52.2


User provided reference genes

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