Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047647 Camellia sinensis var. sinensis HOM05D011528 ORTHO05D015218 3.8e-185 651.4 328 100.0
CSS0021273 Camellia sinensis var. sinensis HOM05D011528 ORTHO05D015218 3.6e-111 405.6 316 72.5
Rhsim05G0097500 Rhododendron simsii HOM05D011528 ORTHO05D015218 3.1e-38 163.3 250 45.6
RhsimUnG0084300 Rhododendron simsii HOM05D011528 ORTHO05D000563 1.7e-36 157.5 343 37.0
Rhsim08G0172700 Rhododendron simsii HOM05D001156 ORTHO05D000024 8.3e-23 112.1 109 59.6
Rhsim09G0176000 Rhododendron simsii HOM05D011528 ORTHO05D030534 2.4e-22 110.5 249 36.9
Actinidia20825 Actinidia chinensis HOM05D011528 ORTHO05D015218 1.6e-21 107.8 261 36.0
Rhsim05G0179000 Rhododendron simsii HOM05D011528 ORTHO05D015218 2.7e-21 107.1 323 32.2
Rhsim05G0211200 Rhododendron simsii HOM05D011528 ORTHO05D015218 5.0e-20 102.8 255 34.9
Rhsim08G0083200 Rhododendron simsii HOM05D003191 ORTHO05D003656 9.5e-19 98.6 109 55.0
RhsimUnG0111900 Rhododendron simsii HOM05D011528 ORTHO05D015218 2.8e-18 97.1 110 54.5
ECA246G2687 Erigeron canadensis HOM05D000321 ORTHO05D000002 3.6e-10 70.1 148 34.5
ATR0757G085 Amborella trichopoda HOM05D033186 ORTHO05D015218 4.7e-10 69.7 164 35.4
ECA240G1927 Erigeron canadensis HOM05D000145 ORTHO05D000115 1.0e-09 68.6 148 35.8
Actinidia20739 Actinidia chinensis HOM05D011528 ORTHO05D015218 1.4e-09 68.2 214 31.8
Rhsim09G0097900 Rhododendron simsii HOM05D011528 ORTHO05D015218 4.0e-09 66.6 102 39.2
ECA238G1641 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.2e-09 66.2 148 35.1
RhsimUnG0194800 Rhododendron simsii HOM05D000920 ORTHO05D000626 6.8e-09 65.9 125 35.2
ECA248G0299 Erigeron canadensis HOM05D000006 ORTHO05D000091 8.9e-09 65.5 126 37.3
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 8.9e-09 65.5 98 39.8
Hma1.2p1_2119F.1_g314400 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.5e-08 64.7 121 31.4
Hma1.2p1_0341F.1_g130310 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.0e-08 64.3 130 30.8
CiPaw.14G083400 Carya illinoinensis HOM05D000004 ORTHO05D000563 3.4e-08 63.5 119 34.5
Rhsim02G0040000 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.4e-08 63.5 114 36.0
Rhsim08G0252200 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.4e-08 63.2 118 37.3
Rhsim10G0118600 Rhododendron simsii HOM05D000362 ORTHO05D000325 4.4e-08 63.2 119 35.3
Atru.chr11.824 Acer truncatum HOM05D010229 ORTHO05D012533 9.8e-08 62.0 188 27.7
Rhsim06G0029600 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.3e-07 61.6 113 37.2
BolC3t20667H Brassica oleracea HOM05D000004 ORTHO05D000563 2.2e-07 60.8 181 28.2
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 3.7e-07 60.1 121 33.9
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 3.7e-07 60.1 121 33.9
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.7e-07 60.1 121 33.9
Hma1.2p1_0296F.1_g116840 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 6.4e-07 59.3 152 25.0
Rhsim04G0049200 Rhododendron simsii HOM05D000004 ORTHO05D000563 6.4e-07 59.3 121 33.1
PSO356G0054 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 58.5 167 29.9
Rhsim04G0098200 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.1e-06 58.5 119 33.6
PSO423G0076 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-06 58.2 187 27.3
Rhsim06G0132200 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.4e-06 58.2 119 33.6
Rhsim08G0120100 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.4e-06 58.2 120 35.0
TWI60G1627 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-06 58.2 124 27.4
Rhsim13G0079100 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.9e-06 57.8 149 30.2
SEGI_35976 Sequoiadendron giganteum HOM05D013116 ORTHO05D012902 2.4e-06 57.4 134 31.3
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 3.2e-06 57.0 146 31.5
Rhsim04G0004700 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.2e-06 57.0 166 28.9
RhsimUnG0112400 Rhododendron simsii HOM05D011528 ORTHO05D015218 3.2e-06 57.0 62 54.8
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 4.1e-06 56.6 146 32.9
Rhsim03G0243100 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.1e-06 56.6 166 28.3
PSO067G0006 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-06 56.2 187 25.1
PSO832G0610 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-06 56.2 187 25.1
PGR102G3222 Punica granatum HOM05D000004 ORTHO05D000002 5.4e-06 56.2 123 31.7
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 5.4e-06 56.2 144 31.2
Thhalv10012229m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 7.0e-06 55.8 136 31.6
PSO782G4047 Papaver somniferum HOM05D000004 ORTHO05D000002 7.0e-06 55.8 187 25.1
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 9.2e-06 55.5 155 29.0
ECA240G4601 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.2e-06 55.5 130 32.3
Hma1.2p1_0502F.1_g167870 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.2e-06 55.5 151 26.5


User provided reference genes

Program Settings