Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 2.1e-177 625.5 305 100.0
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 5.3e-165 584.3 305 92.1
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 2.2e-163 578.9 305 91.8
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 8.4e-163 577.0 305 92.5
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.5e-159 566.2 303 89.8
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.9e-159 565.8 303 88.8
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 5.7e-159 564.3 305 87.9
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.6e-158 562.8 303 88.4
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.8e-158 562.0 303 88.8
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 6.3e-158 560.8 303 88.1
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 2.4e-157 558.9 303 88.4
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 6.9e-157 557.4 298 89.6
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 9.0e-157 557.0 324 84.3
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 1.5e-156 556.2 302 87.1
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 2.0e-156 555.8 305 86.2
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 2.0e-156 555.8 305 87.5
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 7.7e-156 553.9 305 86.2
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 1.1e-154 550.1 305 85.6
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.4e-154 549.7 302 87.1
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 3.2e-154 548.5 305 86.2
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 7.2e-154 547.4 305 85.2
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 3.6e-153 545.0 305 84.9
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 7.9e-153 543.9 306 84.3
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 7.9e-153 543.9 305 85.6
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 1.4e-152 543.1 303 86.8
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.4e-152 543.1 305 84.9
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.8e-152 542.7 301 86.0
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.0e-152 542.0 298 86.9
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.6e-151 538.9 298 86.6
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 5.7e-151 537.7 294 85.7
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.7e-151 537.7 306 85.0
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.7e-151 537.7 306 85.0
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 7.4e-151 537.3 295 86.4
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.7e-150 536.2 306 84.6
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 1.7e-150 536.2 306 85.6
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 3.7e-150 535.0 306 84.3
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 3.7e-150 535.0 298 85.9
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 3.7e-150 535.0 305 84.9
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 8.2e-150 533.9 306 84.3
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.4e-149 533.1 305 83.6
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 2.4e-149 532.3 299 83.9
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 2.4e-149 532.3 305 84.3
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 4.1e-149 531.6 297 84.5
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 1.2e-148 530.0 305 83.9
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 1.2e-148 530.0 300 83.3
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 2.6e-148 528.9 297 85.2
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.0e-147 526.9 314 81.5
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 1.7e-147 526.2 298 83.2
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 8.5e-147 523.9 322 80.4
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 4.2e-146 521.5 303 82.5
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 3.6e-145 518.5 306 81.0
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 4.7e-145 518.1 353 73.1
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.4e-144 516.5 304 80.9
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.8e-144 516.2 317 78.9
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.3e-144 515.8 286 85.3
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.5e-143 513.1 295 81.7
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 5.7e-143 511.1 295 81.7
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 3.7e-142 508.4 295 81.4
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 1.1e-141 506.9 295 81.4
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 1.4e-141 506.5 299 82.6
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.8e-141 506.1 295 81.7
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 3.1e-141 505.4 295 81.4
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 4.1e-141 505.0 278 86.7
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 4.1e-141 505.0 297 80.1
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 5.3e-141 504.6 295 81.4
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 7.0e-141 504.2 295 79.7
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 1.2e-140 503.4 292 81.5
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.3e-139 500.0 303 75.6
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.3e-139 500.0 295 80.7
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.3e-139 500.0 295 80.7
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.7e-139 499.6 295 79.0
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 3.8e-139 498.4 296 79.1
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 8.5e-139 497.3 296 80.7
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 8.5e-139 497.3 304 78.9
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 1.1e-138 496.9 295 79.7
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.1e-138 496.9 293 79.2
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 1.5e-138 496.5 303 74.9
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 1.6e-137 493.0 295 79.7
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 3.0e-136 488.8 296 78.4
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 4.0e-136 488.4 266 88.0
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 6.7e-136 487.6 295 77.6
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.5e-135 486.5 299 79.6
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 2.0e-135 486.1 320 74.4
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.3e-134 483.4 295 77.6
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 3.7e-134 481.9 298 75.8
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 7.0e-133 477.6 336 72.3
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 6.5e-131 471.1 291 75.3
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.8e-128 463.0 302 77.8
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 2.0e-127 459.5 290 74.1
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 5.7e-127 458.0 300 72.3
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.8e-125 453.0 305 73.4
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 7.7e-124 447.6 266 78.2
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.0e-115 420.6 299 68.2
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 9.2e-109 397.5 221 84.2
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 1.5e-106 390.2 199 93.5
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 4.9e-102 375.2 286 60.8
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 8.3e-102 374.4 288 61.8
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 9.5e-98 360.9 291 62.2
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 6.8e-96 354.8 200 81.5
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 3.5e-92 342.4 287 59.2
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 8.1e-89 331.3 199 78.9
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 4.7e-81 305.4 184 78.3
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 8.9e-80 301.2 167 85.0
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.2e-71 274.2 263 52.1
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.8e-67 260.4 147 83.7
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.1e-66 257.7 151 78.1
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 3.3e-58 229.6 141 83.7
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 1.8e-56 223.8 151 72.8
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 7.6e-47 191.8 117 79.5
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 2.1e-44 183.7 108 81.5
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.6e-34 150.2 79 93.7
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 3.3e-34 149.8 84 85.7
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.1e-32 144.8 118 65.3
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.7e-30 137.5 72 94.4
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 2.7e-28 130.2 339 27.7
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 4.4e-26 122.9 73 78.1
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 3.1e-24 116.7 329 27.1
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 2.2e-22 110.5 296 26.0
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.2e-10 71.6 41 80.5


User provided reference genes

Program Settings