Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 4.2e-254 880.9 468 100.0
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 5.4e-217 757.7 469 84.2
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 9.5e-214 746.9 469 85.1
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 4.4e-211 738.0 469 81.9
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 6.6e-207 724.2 469 82.5
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.5e-206 723.0 469 81.7
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 4.3e-206 721.5 469 81.4
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 1.7e-202 709.5 469 79.7
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 3.7e-202 708.4 469 77.6
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 1.1e-201 706.8 469 78.9
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 3.2e-201 705.3 469 78.3
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 7.0e-201 704.1 469 81.7
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 2.7e-200 702.2 469 77.6
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 6.0e-200 701.0 468 80.3
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.0e-199 700.3 469 78.7
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 4.3e-198 694.9 469 76.8
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 5.6e-198 694.5 470 79.1
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.4e-196 689.9 469 76.3
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 2.3e-196 689.1 469 77.4
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.3e-196 689.1 469 79.3
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 3.1e-196 688.7 498 77.3
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 2.0e-195 686.0 464 78.0
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 5.8e-195 684.5 469 78.7
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 7.5e-195 684.1 469 76.3
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 7.5e-195 684.1 469 75.9
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 9.8e-195 683.7 486 73.7
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 6.4e-194 681.0 469 78.7
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 8.3e-194 680.6 469 74.4
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 1.1e-193 680.2 469 76.3
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 1.1e-193 680.2 469 77.0
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.9e-193 679.5 471 76.2
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 2.4e-193 679.1 470 77.0
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 3.2e-193 678.7 470 78.1
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 3.2e-193 678.7 470 78.3
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.4e-193 677.9 469 77.4
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 2.7e-192 675.6 469 73.1
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 3.5e-192 675.2 469 77.4
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 1.3e-191 673.3 469 76.1
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 1.3e-191 673.3 469 76.8
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 3.9e-191 671.8 476 78.6
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 5.1e-191 671.4 469 75.5
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 5.1e-191 671.4 469 75.7
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 8.6e-191 670.6 470 77.4
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 8.6e-191 670.6 496 73.8
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 1.9e-190 669.5 464 76.3
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 5.6e-190 667.9 469 72.7
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 5.6e-190 667.9 469 77.8
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 5.6e-190 667.9 469 78.0
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 7.3e-190 667.5 470 77.9
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 9.5e-190 667.2 469 72.7
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 2.1e-189 666.0 470 74.9
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.8e-189 665.6 452 80.5
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 3.6e-189 665.2 470 74.5
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 4.7e-189 664.8 469 74.8
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 8.1e-189 664.1 469 75.9
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.3e-188 662.5 469 75.5
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 2.3e-188 662.5 470 75.3
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 1.5e-187 659.8 417 80.3
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 4.4e-187 658.3 469 77.2
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 4.4e-187 658.3 452 80.3
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 2.2e-186 656.0 469 75.1
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 2.9e-186 655.6 469 74.4
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 4.9e-186 654.8 469 72.5
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 6.4e-186 654.4 469 76.8
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.4e-185 653.3 469 74.4
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 1.9e-185 652.9 469 75.3
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 2.4e-185 652.5 470 76.0
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 3.2e-185 652.1 469 73.1
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 4.1e-185 651.7 467 72.4
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 5.4e-185 651.4 470 72.8
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 1.6e-184 649.8 515 68.3
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.1e-184 649.4 470 72.3
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 2.1e-184 649.4 428 79.4
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.7e-184 649.0 448 77.0
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 3.5e-184 648.7 468 73.5
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 7.8e-184 647.5 469 72.9
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 1.7e-183 646.4 428 79.0
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 2.3e-183 646.0 470 73.8
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 3.9e-183 645.2 469 73.1
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.9e-182 642.9 470 74.3
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 2.5e-182 642.5 469 73.1
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 2.5e-182 642.5 400 82.5
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 3.3e-182 642.1 402 79.1
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 4.3e-182 641.7 471 74.7
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 5.6e-182 641.3 470 73.8
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 9.5e-182 640.6 435 76.3
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 2.8e-181 639.0 469 72.5
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 5.2e-180 634.8 469 72.7
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 5.2e-180 634.8 469 72.7
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 5.2e-180 634.8 469 72.7
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 2.0e-179 632.9 470 73.2
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 5.8e-179 631.3 470 73.0
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 1.3e-178 630.2 422 76.3
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 3.8e-178 628.6 469 72.5
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 8.4e-178 627.5 421 76.5
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 1.9e-177 626.3 469 71.6
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 4.6e-176 621.7 470 70.4
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 7.8e-176 620.9 470 71.3
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.3e-175 620.2 469 71.4
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.1e-173 612.8 470 70.4
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 9.9e-171 604.0 416 76.9
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.7e-170 603.2 469 70.6
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 6.4e-170 601.3 492 67.1
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 7.1e-169 597.8 455 68.8
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 1.3e-167 593.6 467 70.2
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 3.9e-167 592.0 465 70.5
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 4.5e-163 578.6 470 68.3
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 2.4e-161 572.8 457 65.0
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 6.0e-160 568.2 400 74.2
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 9.6e-158 560.8 418 67.7
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 4.3e-150 535.4 317 85.8
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.5e-139 500.4 385 71.4
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 2.9e-130 469.5 400 60.8
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 2.1e-128 463.4 412 58.7
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 5.7e-126 455.3 403 57.3
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 4.2e-113 412.5 469 51.2
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 2.3e-103 380.2 266 78.6
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 9.1e-100 368.2 416 51.2
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 1.7e-98 364.0 286 62.9
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 4.4e-94 349.4 536 38.2
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 6.8e-79 298.9 188 82.4
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 1.2e-67 261.5 275 57.8
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 5.4e-60 236.1 263 52.9
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 7.1e-60 235.7 263 52.9
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 2.1e-51 207.6 207 59.9
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 5.1e-42 176.4 126 76.2
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.9e-41 174.5 145 64.8
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 1.8e-39 167.9 188 55.3
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 4.5e-38 163.3 167 57.5
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 1.3e-32 145.2 165 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.2e-30 138.7 401 28.7
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 2.5e-20 104.4 102 60.8
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.5e-17 94.4 57 84.2
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 1.2e-14 85.5 70 71.4
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 4.5e-14 83.6 59 66.1
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 1.4e-12 78.6 69 68.1


User provided reference genes

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