Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047228 Camellia sinensis var. sinensis HOM05D002313 ORTHO05D110407 2.6e-68 261.9 134 100.0
CSS0013451 Camellia sinensis var. sinensis HOM05D002313 ORTHO05D003747 6.2e-09 64.7 39 79.5
Cc04_g05640 Coffea canephora HOM05D002313 ORTHO05D003747 8.1e-09 64.3 39 79.5
DCAR_025630 Daucus carota HOM05D002313 ORTHO05D003747 8.1e-09 64.3 37 83.8
Hma1.2p1_1333F.1_g276220 Hydrangea macrophylla HOM05D002313 ORTHO05D003747 8.1e-09 64.3 39 79.5
Actinidia25503 Actinidia chinensis HOM05D002313 ORTHO05D003747 1.4e-08 63.5 39 76.9
MBI07_g42015_MAGBIO Magnolia biondii HOM05D002313 ORTHO05D003747 1.4e-08 63.5 44 70.5
vmacro19101 Vaccinium macrocarpon HOM05D002313 ORTHO05D003747 1.4e-08 63.5 39 76.9
Rhsim08G0199800 Rhododendron simsii HOM05D002313 ORTHO05D003747 1.8e-08 63.2 39 76.9
Peaxi162Scf00314g00724 Petunia axillaris HOM05D002313 ORTHO05D003747 3.1e-08 62.4 39 74.4
TAR622G1219 Trochodendron aralioides HOM05D002313 ORTHO05D003747 4.0e-08 62.0 44 65.9
MBI11_g17277_MAGBIO Magnolia biondii HOM05D002313 ORTHO05D003747 5.2e-08 61.6 49 61.2
Nitab4.5_0011883g0030 Nicotiana tabacum HOM05D002313 ORTHO05D003747 5.2e-08 61.6 39 74.4
Nn3g16203 Nelumbo nucifera HOM05D002313 ORTHO05D003747 6.8e-08 61.2 37 78.4
Solyc03g118010.4 Solanum lycopersicum HOM05D002313 ORTHO05D003747 6.8e-08 61.2 39 74.4
Solyc03g118020.3 Solanum lycopersicum HOM05D002313 ORTHO05D003747 6.8e-08 61.2 39 74.4
Sopen03g036910 Solanum pennellii HOM05D002313 ORTHO05D003747 6.8e-08 61.2 39 74.4
Sopen03g036920 Solanum pennellii HOM05D002313 ORTHO05D003747 6.8e-08 61.2 39 74.4
PGSC0003DMG400014229 Solanum tuberosum HOM05D002313 ORTHO05D003747 6.8e-08 61.2 39 74.4
CDE05G1195 Ceratophyllum demersum HOM05D002313 ORTHO05D003747 8.9e-08 60.8 37 78.4
CDE05G2049 Ceratophyllum demersum HOM05D002313 ORTHO05D003747 8.9e-08 60.8 37 78.4
MSTRG.9381 Avicennia marina HOM05D002313 ORTHO05D003747 1.2e-07 60.5 39 74.4
SGA_v2.0_scaffold40G15690 Striga asiatica HOM05D002313 ORTHO05D003747 1.2e-07 60.5 39 74.4
vmacro16771 Vaccinium macrocarpon HOM05D002313 ORTHO05D003747 1.2e-07 60.5 37 75.7
CAN.G1008.40 Capsicum annuum HOM05D002313 ORTHO05D003747 1.5e-07 60.1 39 71.8
PSO478G1808 Papaver somniferum HOM05D002313 ORTHO05D003747 2.0e-07 59.7 44 65.9
PSO017G3625 Papaver somniferum HOM05D002313 ORTHO05D003747 2.6e-07 59.3 44 65.9
Rhsim12G0182300 Rhododendron simsii HOM05D002313 ORTHO05D003747 3.4e-07 58.9 37 73.0
SalBow1G2272 Salvia bowleyana HOM05D002313 ORTHO05D003747 5.8e-07 58.2 39 71.8
unitig_736.g22833 Utricularia gibba HOM05D002313 ORTHO05D003747 5.8e-07 58.2 39 69.2
Nitab4.5_0000976g0220 Nicotiana tabacum HOM05D002313 ORTHO05D003747 7.6e-07 57.8 39 71.8
SEGI_32934 Sequoiadendron giganteum HOM05D002313 ORTHO05D003747 9.9e-07 57.4 39 64.1
SGA_v2.0_scaffold74G24624 Striga asiatica HOM05D002313 ORTHO05D003747 9.9e-07 57.4 39 69.2
HPP92_007020 Vanilla planifolia HOM05D002313 ORTHO05D003747 9.9e-07 57.4 39 64.1
Aqoxy3G01983 Aquilegia oxysepala HOM05D002313 ORTHO05D003747 1.7e-06 56.6 37 73.0
unitig_899.g14825 Utricularia gibba HOM05D002313 ORTHO05D003747 1.7e-06 56.6 38 68.4
Oeu060107.2 Olea europaea HOM05D002313 ORTHO05D003747 2.2e-06 56.2 39 69.2
Peaxi162Scf00835g00334 Petunia axillaris HOM05D002313 ORTHO05D003747 2.2e-06 56.2 36 72.2
Lsat_1_v5_gn_1_29960 Lactuca sativa HOM05D002313 ORTHO05D003747 3.8e-06 55.5 43 60.5
MSTRG.4649 Avicennia marina HOM05D002313 ORTHO05D003747 4.9e-06 55.1 39 69.2
SMO358G0313 Selaginella moellendorffii HOM05D002313 ORTHO05D003747 4.9e-06 55.1 39 69.2
Nitab4.5_0002540g0070 Nicotiana tabacum HOM05D002313 ORTHO05D003747 8.4e-06 54.3 36 69.4
Nitab4.5_0004781g0060 Nicotiana tabacum HOM05D002313 ORTHO05D003747 8.4e-06 54.3 36 69.4
Zm00001eb180670 Zea mays HOM05D002313 ORTHO05D003747 8.4e-06 54.3 39 66.7


User provided reference genes

Program Settings