Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 1.9e-283 978.4 470 100.0
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 2.8e-205 718.8 463 72.4
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 6.4e-202 707.6 465 73.3
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 5.4e-193 677.9 459 70.4
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 1.1e-188 663.7 466 67.4
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 1.4e-185 653.3 410 75.1
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 4.2e-185 651.7 466 65.9
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 1.8e-172 609.8 458 61.1
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 9.0e-172 607.4 463 60.7
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 9.9e-171 604.0 465 61.5
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 1.4e-169 600.1 464 61.4
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 7.9e-168 594.3 458 61.4
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 1.0e-167 594.0 464 59.5
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 3.0e-167 592.4 458 60.5
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 6.7e-167 591.3 467 61.2
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 2.5e-166 589.3 463 59.6
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 3.3e-166 589.0 463 59.4
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 9.6e-166 587.4 467 61.0
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 9.6e-166 587.4 459 59.9
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 1.6e-165 586.6 466 60.7
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 4.8e-165 585.1 475 58.9
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 2.4e-164 582.8 461 60.3
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 3.4e-163 578.9 458 60.5
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 1.0e-162 577.4 544 52.2
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 4.9e-162 575.1 461 58.1
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 1.4e-161 573.5 463 59.4
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 7.1e-161 571.2 465 58.5
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 7.1e-161 571.2 460 59.3
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 2.1e-160 569.7 460 59.1
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 2.4e-156 556.2 465 56.6
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 2.2e-154 549.7 426 59.2
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 3.2e-153 545.8 466 55.2
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 9.4e-153 544.3 460 55.9
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 2.2e-149 533.1 515 50.5
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 3.1e-148 529.3 480 54.6
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 4.1e-148 528.9 465 54.8
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 7.7e-147 524.6 467 53.1
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 1.1e-145 520.8 465 53.5
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 1.9e-145 520.0 467 54.0
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 1.2e-144 517.3 467 52.2
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 1.4e-143 513.8 461 54.4
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 2.8e-141 506.1 467 54.4
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 1.1e-140 504.2 462 50.6
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 1.8e-140 503.4 465 51.8
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 1.9e-137 493.4 459 53.8
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 5.5e-137 491.9 448 54.5
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 3.7e-133 479.2 458 51.1
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 1.8e-132 476.9 459 49.7
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 1.0e-130 471.1 473 51.4
DCAR_003065 Daucus carota HOM05D004162 ORTHO05D004543 1.5e-129 467.2 379 58.8
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 8.0e-128 461.5 460 50.2
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 5.2e-127 458.8 469 49.0
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 2.6e-126 456.4 421 53.0
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 1.3e-125 454.1 469 48.6
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 2.9e-122 443.0 459 49.5
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 5.0e-122 442.2 459 49.5
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 5.0e-122 442.2 380 57.6
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 1.5e-121 440.7 459 49.5
Rhsim08G0126500 Rhododendron simsii HOM05D004162 ORTHO05D004543 1.7e-117 427.2 267 75.3
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 2.4e-116 423.3 462 44.8
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 1.6e-115 420.6 463 45.6
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 2.9e-114 416.4 458 48.0
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 5.0e-114 415.6 377 52.5
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 2.5e-113 413.3 458 47.8
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 1.2e-112 411.0 535 43.2
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 8.0e-112 408.3 483 43.7
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 3.0e-111 406.4 472 44.3
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 4.9e-109 399.1 462 44.8
Prupe.5G233900 Prunus persica HOM05D004162 ORTHO05D004543 1.8e-108 397.1 384 52.1
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 9.2e-108 394.8 463 43.6
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 1.6e-107 394.0 471 44.4
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 2.0e-107 393.7 469 42.2
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 7.8e-107 391.7 469 42.0
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 2.9e-106 389.8 475 43.6
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 2.9e-106 389.8 468 43.4
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 2.9e-106 389.8 468 43.4
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 1.5e-105 387.5 469 41.8
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 1.9e-105 387.1 391 48.3
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 2.5e-105 386.7 452 44.0
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 5.6e-105 385.6 428 45.8
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.2e-104 384.4 462 43.3
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 1.8e-103 380.6 466 43.6
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 1.8e-103 380.6 461 44.3
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 5.2e-103 379.0 465 45.4
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 2.9e-101 373.2 469 42.2
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 4.9e-101 372.5 467 42.8
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 1.1e-100 371.3 461 43.4
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 4.1e-100 369.4 460 43.5
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 4.1e-100 369.4 503 40.0
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 4.6e-99 365.9 471 42.7
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 3.0e-98 363.2 477 40.9
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 3.0e-98 363.2 477 40.9
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 2.5e-97 360.1 493 39.6
BolC9t59794H Brassica oleracea HOM05D004162 ORTHO05D004543 3.6e-96 356.3 467 42.0
C09p70490 Brassica napus HOM05D004162 ORTHO05D004543 4.7e-96 355.9 466 42.7
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 5.2e-95 352.4 478 40.4
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 2.6e-94 350.1 459 41.8
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 3.4e-94 349.7 464 41.8
Sp6g36540 Schrenkiella parvula HOM05D004162 ORTHO05D004543 5.8e-94 349.0 463 41.5
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 1.7e-93 347.4 463 41.3
A10p30070 Brassica napus HOM05D004162 ORTHO05D004543 4.9e-93 345.9 466 41.6
BraA10t45047Z Brassica rapa HOM05D004162 ORTHO05D004543 4.9e-93 345.9 466 41.4
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 6.4e-93 345.5 484 40.1
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 6.4e-93 345.5 480 39.2
AT5G06310 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 8.3e-93 345.1 458 41.5
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 1.4e-92 344.4 446 39.7
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 2.7e-91 340.1 486 38.9
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 6.0e-91 339.0 460 38.7
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 2.5e-89 333.6 485 38.4
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 2.5e-89 333.6 459 38.3
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 7.3e-89 332.0 453 39.7
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 3.6e-88 329.7 388 45.4
Phvul.002G330500 Phaseolus vulgaris HOM05D004162 ORTHO05D004543 4.7e-88 329.3 307 53.1
AUR62037555 Chenopodium quinoa HOM05D004162 ORTHO05D004543 1.8e-87 327.4 336 48.5
CARHR207050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 5.2e-87 325.9 464 39.0
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 2.2e-85 320.5 463 39.1
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 2.4e-84 317.0 464 40.5
Sc04g0004810 Simmondsia chinensis HOM05D004162 ORTHO05D004543 3.2e-84 316.6 312 51.3
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 1.5e-81 307.8 464 37.9
BcaC04g21892 Brassica carinata HOM05D004162 ORTHO05D004543 1.1e-79 301.6 472 38.3
C09p26100 Brassica napus HOM05D004162 ORTHO05D004543 1.1e-79 301.6 472 38.3
BolC9t55513H Brassica oleracea HOM05D004162 ORTHO05D004543 1.2e-78 298.1 472 37.5
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 2.6e-78 297.0 460 39.1
CDE11G0199 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 3.4e-78 296.6 331 47.7
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 9.9e-78 295.0 465 38.3
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 6.4e-77 292.4 468 38.2
BcaC06g32364 Brassica carinata HOM05D004162 ORTHO05D004543 8.4e-77 292.0 467 39.0
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 5.4e-76 289.3 470 37.4
SHI19078 Sapria himalayana HOM05D004162 ORTHO05D004543 1.6e-75 287.7 262 56.1
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 1.0e-74 285.0 489 33.7
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 3.9e-74 283.1 457 36.5
Potri.012G046400 Populus trichocarpa HOM05D004162 ORTHO05D004543 5.1e-74 282.7 257 53.3
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 3.3e-73 280.0 490 34.7
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 1.6e-72 277.7 383 38.1
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.6e-72 276.6 315 45.7
VMungo0251G0610 Vigna mungo HOM05D004162 ORTHO05D004543 8.1e-72 275.4 432 37.5
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 3.1e-71 273.5 498 33.9
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 8.4e-69 265.4 489 34.8
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 1.1e-68 265.0 304 44.4
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 5.4e-68 262.7 315 44.1
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 3.1e-63 246.9 509 32.6
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 4.2e-60 236.5 286 40.6
AUR62019586 Chenopodium quinoa HOM05D004162 ORTHO05D004543 1.6e-51 208.0 136 69.9
CDE02G0891 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 4.6e-51 206.5 194 53.1
TPR.G1445 Trifolium pratense HOM05D004162 ORTHO05D004543 6.7e-50 202.6 294 39.8
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 2.5e-49 200.7 363 33.9
AUR62013945 Chenopodium quinoa HOM05D004162 ORTHO05D004543 1.8e-47 194.5 161 59.0
Cfa023195 Carpinus fangiana HOM05D004162 ORTHO05D004543 6.9e-47 192.6 296 38.2
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 1.2e-43 181.8 178 51.7
CiPaw.09G010800 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.2e-38 165.2 202 44.6
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 4.3e-33 146.7 426 29.1
HPP92_005316 Vanilla planifolia HOM05D004162 ORTHO05D004543 2.4e-31 141.0 196 41.8
CBR_g34767 Chara braunii HOM05D004162 ORTHO05D004543 6.3e-24 116.3 307 28.0
Sabra12G0032500 Salix brachista HOM05D004162 ORTHO05D004543 5.3e-23 113.2 89 62.9
CiPaw.09G010700 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.2e-19 102.1 147 39.5
SEGI_33776 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 2.8e-16 90.9 120 39.2
ATR1149G147 Amborella trichopoda HOM05D004162 ORTHO05D004543 1.8e-15 88.2 144 39.6
SEGI_28626 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 4.1e-15 87.0 135 38.5
Haze_09935 Corylus avellana HOM05D001513 ORTHO05D004543 7.0e-15 86.3 61 59.0
Lj1g0024684 Lotus japonicus HOM05D004162 ORTHO05D004543 1.0e-13 82.4 60 61.7
QL10p030172 Quercus lobata HOM05D004162 ORTHO05D004543 6.1e-11 73.2 72 50.0
AT2G04395 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 1.0e-10 72.4 87 34.5
vmacro09754 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 4.4e-09 67.0 84 44.0
VMungo0464G1157 Vigna mungo HOM05D004162 ORTHO05D004543 8.3e-08 62.8 104 39.4
VMungo0464G1805 Vigna mungo HOM05D004162 ORTHO05D004543 7.0e-07 59.7 99 40.4


User provided reference genes

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