Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046041 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 8.1e-120 433.7 215 100.0
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 1.7e-93 346.3 205 87.3
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 2.6e-86 322.4 205 80.0
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 5.0e-85 318.2 205 80.0
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 1.9e-84 316.2 205 79.0
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 1.9e-84 316.2 205 79.5
Lj2A895T22 Lonicera japonica HOM05D001598 ORTHO05D007192 7.2e-84 314.3 205 77.1
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 2.7e-83 312.4 205 77.1
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 6.1e-83 311.2 205 77.6
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 1.4e-82 310.1 205 77.6
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 2.3e-82 309.3 205 78.0
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 5.2e-82 308.1 205 78.5
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 6.7e-82 307.8 206 77.7
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 1.1e-81 307.0 205 76.6
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 2.6e-81 305.8 205 75.6
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 2.6e-81 305.8 205 75.6
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 5.7e-81 304.7 205 76.6
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 5.7e-81 304.7 205 75.6
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.3e-80 303.5 209 75.1
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.3e-80 303.5 209 75.1
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 1.3e-80 303.5 205 75.6
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 1.3e-80 303.5 205 75.1
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 8.2e-80 300.8 205 75.6
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 1.1e-79 300.4 205 74.6
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 1.1e-79 300.4 205 74.6
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.4e-79 300.1 206 76.2
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 2.4e-79 299.3 205 75.6
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 2.4e-79 299.3 206 76.2
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 9.1e-79 297.4 205 73.2
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 1.6e-78 296.6 203 76.4
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 1.6e-78 296.6 202 73.3
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 4.5e-78 295.0 206 73.8
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 5.9e-78 294.7 205 74.1
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 5.9e-78 294.7 205 73.7
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 7.7e-78 294.3 314 54.1
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 1.0e-77 293.9 202 73.3
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 1.0e-77 293.9 202 73.3
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 1.7e-77 293.1 205 74.1
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 2.9e-77 292.4 205 73.7
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 3.8e-77 292.0 206 75.2
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 1.1e-76 290.4 209 72.2
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 1.5e-76 290.0 207 72.9
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 1.5e-76 290.0 208 71.6
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 1.5e-76 290.0 208 72.1
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 1.9e-76 289.7 210 72.4
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 1.9e-76 289.7 198 75.3
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 2.5e-76 289.3 209 71.3
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 2.5e-76 289.3 205 70.7
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 3.2e-76 288.9 205 73.7
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 3.2e-76 288.9 209 72.2
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 7.2e-76 287.7 197 76.1
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 7.2e-76 287.7 205 71.7
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 9.4e-76 287.3 207 71.5
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 2.7e-75 285.8 211 70.1
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 2.7e-75 285.8 211 70.1
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 6.1e-75 284.6 205 71.7
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 8.0e-75 284.3 202 71.8
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 1.8e-74 283.1 205 71.2
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 2.3e-74 282.7 209 71.3
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 2.3e-74 282.7 205 70.2
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 2.3e-74 282.7 197 75.1
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 4.0e-74 282.0 197 74.1
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 6.8e-74 281.2 201 69.7
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 8.8e-74 280.8 205 69.3
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.2e-73 280.4 205 69.3
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 1.2e-73 280.4 207 70.0
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 9.8e-73 277.3 203 70.0
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 1.3e-72 276.9 202 68.3
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 2.8e-72 275.8 202 71.3
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 3.7e-72 275.4 202 67.8
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 6.3e-72 274.6 203 69.0
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 1.4e-71 273.5 201 71.1
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 1.4e-71 273.5 202 68.3
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 3.1e-71 272.3 202 70.3
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 5.4e-71 271.6 203 67.5
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 5.4e-71 271.6 192 72.4
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 9.1e-71 270.8 205 67.3
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 9.1e-71 270.8 205 66.8
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 1.2e-70 270.4 270 58.1
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 1.6e-70 270.0 205 70.2
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 1.7e-69 266.5 211 67.3
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 2.2e-69 266.2 233 62.7
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 3.8e-69 265.4 233 62.2
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 3.8e-69 265.4 204 68.6
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 4.2e-68 261.9 209 67.0
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 2.1e-67 259.6 202 65.8
HPP92_013448 Vanilla planifolia HOM05D001598 ORTHO05D007192 2.3e-66 256.1 205 65.9
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 3.7e-64 248.8 202 64.4
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 3.8e-61 238.8 212 62.3
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 1.5e-60 236.9 208 61.1
SEGI_37017 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.9e-60 236.5 195 63.1
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 3.6e-59 232.3 205 60.0
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 4.0e-58 228.8 205 61.5
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 3.4e-57 225.7 211 57.8
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 3.6e-51 205.7 204 53.9
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 2.7e-46 189.5 108 88.0
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 1.0e-45 187.6 108 84.3
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 4.7e-43 178.7 110 82.7
Lj2C893T10 Lonicera japonica HOM05D001598 ORTHO05D007192 2.9e-32 142.9 79 87.3
Nn1g08035 Nelumbo nucifera HOM05D001598 ORTHO05D007192 4.9e-32 142.1 117 63.2
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 3.2e-31 139.4 141 60.3
BcaB08g37328 Brassica carinata HOM05D001598 ORTHO05D007192 1.0e-29 134.4 118 61.0
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 3.9e-29 132.5 89 74.2
SEGI_32063 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 2.4e-26 123.2 138 49.3
SGA_v2.0_scaffold6G03251 Striga asiatica HOM05D001598 ORTHO05D007192 1.3e-24 117.5 130 55.4
Zm00001eb067470 Zea mays HOM05D001598 ORTHO05D007192 6.4e-24 115.2 76 75.0
PRCOL_00002568 Prasinoderma coloniale HOM05D001598 ORTHO05D007192 4.6e-22 109.0 166 40.4
BcaB08g37330 Brassica carinata HOM05D001598 ORTHO05D007192 1.0e-21 107.8 106 57.5
CBR_g53773 Chara braunii HOM05D000019 ORTHO05D000002 3.9e-21 105.9 168 40.5
BcaC04g19497 Brassica carinata HOM05D001598 ORTHO05D007192 5.6e-20 102.1 106 54.7
Glyma.14G045450 Glycine max HOM05D001598 ORTHO05D007192 5.6e-20 102.1 65 73.8
MCO03G199 Micromonas commoda HOM05D001598 ORTHO05D007192 6.9e-18 95.1 163 37.4
TAR374G1328 Trochodendron aralioides HOM05D001598 ORTHO05D007192 4.2e-15 85.9 110 48.2
CBR_g53769 Chara braunii HOM05D000019 ORTHO05D000002 3.9e-13 79.3 43 76.7
Cre06.g282150 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 9.6e-12 74.7 168 31.5


User provided reference genes

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