Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 3.2e-170 601.7 303 100.0
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 4.0e-149 531.6 303 87.5
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 2.2e-147 525.8 303 85.1
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 2.3e-144 515.8 303 84.8
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 4.3e-143 511.5 301 85.0
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 3.7e-142 508.4 299 82.9
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 4.5e-140 501.5 304 81.6
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 5.9e-140 501.1 303 80.9
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 1.3e-139 500.0 299 82.9
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.3e-139 500.0 299 82.3
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 3.8e-139 498.4 301 81.1
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 3.8e-139 498.4 303 80.2
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.1e-138 496.9 299 80.6
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.1e-138 496.9 303 81.5
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 3.2e-138 495.4 301 81.4
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 3.2e-138 495.4 301 81.4
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.2e-137 493.4 299 81.6
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 1.6e-137 493.0 302 79.8
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 2.1e-137 492.7 303 79.2
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 2.7e-137 492.3 298 80.5
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 2.7e-137 492.3 303 79.2
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 2.7e-137 492.3 303 79.2
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 3.6e-137 491.9 303 79.9
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 1.0e-136 490.3 303 78.5
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.3e-136 490.0 301 79.7
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.3e-136 489.2 301 80.4
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 2.3e-136 489.2 303 79.9
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 3.0e-136 488.8 301 80.4
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 5.1e-136 488.0 302 79.5
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 8.7e-136 487.3 303 77.6
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 1.1e-135 486.9 303 78.2
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.1e-135 486.9 299 79.9
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 1.1e-135 486.9 303 79.2
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.1e-135 486.9 299 79.6
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 1.5e-135 486.5 299 79.9
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 1.9e-135 486.1 299 79.6
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.9e-135 486.1 303 77.6
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.9e-135 486.1 303 77.6
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.5e-135 485.7 303 78.9
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 2.5e-135 485.7 299 79.6
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 4.3e-135 485.0 303 79.2
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 4.3e-135 485.0 303 77.6
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 4.3e-135 485.0 303 77.9
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.7e-135 484.6 303 78.5
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 5.7e-135 484.6 303 77.2
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 7.4e-135 484.2 303 78.2
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.3e-134 483.4 293 83.3
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.3e-134 483.4 303 78.5
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.8e-134 482.3 303 77.9
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.1e-133 480.3 301 78.4
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.4e-133 479.2 303 77.6
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.2e-132 476.9 303 77.9
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.2e-132 476.9 303 77.9
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.5e-132 476.5 301 77.7
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 2.6e-132 475.7 303 78.2
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.5e-132 474.9 291 79.7
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 4.5e-132 474.9 305 79.0
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.2e-131 472.6 299 76.9
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 6.5e-131 471.1 299 75.9
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 9.4e-130 467.2 298 76.8
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 1.6e-129 466.5 301 78.1
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 8.8e-128 460.7 301 77.7
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 8.8e-128 460.7 300 75.7
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 2.2e-126 456.1 299 75.3
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 6.3e-126 454.5 311 74.3
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 3.1e-125 452.2 299 73.9
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 7.7e-124 447.6 298 72.5
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 6.5e-123 444.5 298 72.8
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 8.5e-123 444.1 298 72.5
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 1.1e-122 443.7 287 76.0
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 5.5e-122 441.4 298 72.5
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 9.4e-122 440.7 298 72.5
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 9.4e-122 440.7 298 72.5
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.2e-121 440.3 299 71.6
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.6e-121 438.7 298 72.1
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 4.7e-121 438.3 298 72.1
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 4.7e-121 438.3 298 72.1
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 1.0e-120 437.2 298 71.1
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.4e-120 436.8 298 71.5
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.4e-120 436.8 298 71.8
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.4e-120 436.8 302 72.2
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 5.2e-120 434.9 298 71.8
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 5.2e-120 434.9 305 72.1
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 6.7e-120 434.5 298 70.8
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 6.7e-120 434.5 298 72.1
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 2.6e-119 432.6 275 77.8
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 1.7e-118 429.9 306 71.9
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.2e-118 429.5 298 70.8
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 6.3e-118 427.9 306 71.9
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.1e-117 427.2 299 71.2
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.8e-117 426.4 298 69.8
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.8e-117 426.4 298 69.8
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.8e-117 426.4 298 69.8
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.8e-117 426.4 305 72.5
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 2.4e-117 426.0 246 84.1
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.4e-117 426.0 302 71.2
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 4.0e-112 408.7 247 80.2
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.4e-104 383.6 300 64.3
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 7.0e-101 371.3 299 63.2
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.2e-100 370.5 261 72.0
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 3.5e-100 369.0 249 69.9
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 5.9e-100 368.2 230 78.3
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 5.9e-100 368.2 304 61.2
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 3.8e-99 365.5 227 77.1
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.9e-98 363.2 217 80.6
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.7e-97 358.6 221 78.3
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 2.3e-96 356.3 255 69.8
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.2e-95 354.0 215 78.6
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.6e-95 352.8 234 73.9
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 2.2e-94 349.7 219 80.4
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 4.0e-88 328.9 277 59.6
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.7e-83 313.5 303 57.1
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.7e-83 313.5 173 86.7
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 6.6e-83 311.6 339 51.3
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 1.0e-59 234.6 316 43.4
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.8e-48 197.2 160 65.6
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.2e-47 194.5 163 59.5
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 3.9e-43 179.5 345 36.2
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 2.8e-41 173.3 303 38.6
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 8.4e-38 161.8 177 49.2
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.2e-37 159.8 105 75.2
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.1e-34 151.4 88 78.4
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 1.2e-28 131.3 87 73.6
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 5.1e-27 125.9 89 74.2
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 6.7e-27 125.6 86 75.6
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 9.7e-26 121.7 346 30.1
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.8e-25 120.2 138 52.2
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 5.3e-24 115.9 72 73.6
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.7e-17 93.2 67 59.7
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 6.3e-17 92.4 64 75.0
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 3.6e-12 76.6 46 76.1


User provided reference genes

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