Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 3.7e-211 738.0 398 100.0
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 4.5e-156 555.1 395 78.0
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 1.0e-139 500.7 436 66.5
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 6.5e-139 498.0 369 74.8
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 3.0e-136 489.2 390 69.2
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 5.3e-133 478.4 385 70.6
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 7.0e-133 478.0 330 79.1
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 7.0e-133 478.0 391 69.1
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 9.1e-133 477.6 386 69.4
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 9.1e-133 477.6 385 71.2
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.6e-132 476.9 386 69.2
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 4.5e-132 475.3 389 68.9
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 1.3e-131 473.8 322 78.9
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 1.6e-129 466.8 365 70.7
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 2.7e-129 466.1 387 68.0
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 1.4e-128 463.8 387 66.1
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 3.0e-128 462.6 390 67.4
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.0e-128 462.6 390 67.4
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 5.2e-128 461.8 388 66.5
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 2.0e-127 459.9 387 65.6
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.4e-127 459.1 390 67.9
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 4.4e-127 458.8 384 66.4
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 4.4e-127 458.8 331 74.3
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.4e-127 458.8 390 67.4
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 7.5e-127 458.0 387 65.6
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 2.2e-126 456.4 387 65.6
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 3.7e-126 455.7 388 67.3
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 1.1e-125 454.1 387 67.4
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.8e-125 453.4 387 65.1
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 3.1e-125 452.6 388 67.0
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 1.2e-124 450.7 400 67.0
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 1.6e-124 450.3 374 68.4
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 5.9e-124 448.4 386 66.6
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 1.0e-123 447.6 385 65.5
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.7e-123 446.8 388 64.9
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 2.9e-123 446.0 388 64.9
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 3.8e-123 445.7 393 64.4
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 5.0e-123 445.3 388 64.7
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 5.0e-123 445.3 385 67.5
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.1e-122 444.1 388 64.7
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.1e-122 444.1 388 64.7
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 1.9e-122 443.4 325 74.2
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 3.2e-122 442.6 388 64.7
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 1.6e-121 440.3 392 64.3
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 1.6e-121 440.3 388 64.7
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.6e-121 439.1 385 66.2
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 4.7e-121 438.7 385 65.5
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 4.7e-121 438.7 413 63.2
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 6.1e-121 438.3 378 65.3
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 1.4e-120 437.2 403 62.3
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.8e-120 436.8 389 63.5
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.8e-120 436.8 386 64.5
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 6.8e-120 434.9 399 65.9
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 6.8e-120 434.9 385 64.4
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 2.0e-119 433.3 408 62.7
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 5.7e-119 431.8 395 63.0
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.2e-118 429.9 385 66.0
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 4.8e-118 428.7 384 64.1
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 8.3e-118 427.9 385 63.6
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 1.4e-117 427.2 329 71.1
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 1.4e-117 427.2 285 79.3
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 3.1e-117 426.0 259 84.9
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 9.1e-117 424.5 329 70.5
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 9.1e-117 424.5 385 62.3
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 3.5e-116 422.5 290 77.2
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 5.5e-114 415.2 385 61.6
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 9.5e-114 414.5 400 61.5
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 2.8e-113 412.9 387 61.5
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 3.6e-113 412.5 385 62.6
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 3.6e-113 412.5 384 62.5
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 4.7e-113 412.1 401 61.6
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 1.0e-112 411.0 251 84.1
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.0e-112 411.0 393 63.4
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 6.8e-112 408.3 271 78.6
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 1.2e-111 407.5 387 62.3
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 4.4e-111 405.6 272 79.0
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 9.8e-111 404.4 387 62.3
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.3e-110 404.1 389 60.7
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 4.1e-109 399.1 390 60.8
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 4.1e-109 399.1 402 57.5
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.7e-107 393.7 379 60.7
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.9e-107 392.9 424 56.6
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 1.1e-106 391.0 336 67.6
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.1e-106 391.0 268 75.4
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 3.3e-106 389.4 382 60.5
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 9.8e-103 377.9 320 63.8
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 2.2e-102 376.7 359 61.8
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 4.1e-101 372.5 268 73.9
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 4.1e-101 372.5 353 63.2
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.2e-100 370.9 318 63.8
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 2.3e-99 366.7 279 73.1
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 5.6e-98 362.1 359 59.9
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 3.6e-97 359.4 404 56.7
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 6.2e-97 358.6 271 69.4
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 1.1e-96 357.8 410 53.2
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 6.8e-96 355.1 415 52.0
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 5.8e-95 352.1 339 61.1
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 1.3e-94 350.9 302 66.2
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 4.1e-93 345.9 388 56.2
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 1.3e-91 340.9 273 65.6
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.1e-90 337.8 208 82.7
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 7.3e-90 335.1 268 66.4
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.8e-88 330.5 273 61.5
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 1.1e-85 321.2 426 53.3
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 3.9e-83 312.8 287 62.7
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 3.4e-79 299.7 177 87.6
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.9e-77 293.9 395 50.1
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 9.3e-77 291.6 318 58.2
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.6e-68 264.2 277 51.3
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 3.5e-68 263.1 243 56.0
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 3.5e-68 263.1 184 73.4
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 3.9e-67 259.6 265 58.1
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.9e-66 257.3 242 57.0
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 2.8e-65 253.4 287 52.6
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 5.3e-64 249.2 157 80.9
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 9.3e-61 238.4 276 53.6
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.7e-59 231.9 249 52.6
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 5.6e-58 229.2 129 90.7
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 4.3e-50 203.0 138 73.9
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 2.4e-48 197.2 130 78.5
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 1.0e-46 191.8 115 87.0
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.3e-43 181.4 105 84.8
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.7e-36 157.1 251 37.5
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 4.2e-29 133.3 179 43.0
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.1e-28 131.0 157 53.5
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-25 121.7 187 39.6
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.8e-25 120.6 82 81.7
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 2.6e-23 114.0 90 64.4
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 3.6e-12 77.0 40 100.0
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 4.7e-12 76.6 119 53.8
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 1.8e-08 64.7 36 88.9
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 2.4e-08 64.3 242 26.0
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 4.5e-07 60.1 51 58.8


User provided reference genes

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