Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 4.6e-242 840.9 445 100.0
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 1.9e-203 712.6 419 84.5
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 7.7e-197 690.6 418 82.3
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 1.8e-182 642.9 368 86.7
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.8e-182 642.9 420 75.7
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.3e-180 636.7 409 74.8
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.9e-179 632.9 414 75.4
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 5.5e-179 631.3 422 73.9
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.6e-178 629.8 412 75.5
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 2.7e-178 629.0 420 74.0
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 6.1e-178 627.9 421 73.2
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 3.0e-177 625.5 427 71.7
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 5.2e-177 624.8 409 73.1
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 2.6e-176 622.5 409 74.3
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 1.3e-175 620.2 415 72.0
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 1.7e-175 619.8 414 72.2
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 1.4e-174 616.7 419 72.6
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 1.8e-174 616.3 419 71.8
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 1.6e-173 613.2 413 72.4
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 3.5e-173 612.1 415 72.0
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 5.9e-173 611.3 412 73.3
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.2e-172 609.4 412 73.3
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 5.0e-172 608.2 412 72.8
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 1.1e-171 607.1 421 71.7
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.1e-171 607.1 409 71.6
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.5e-171 605.9 412 72.6
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 4.2e-171 605.1 419 69.9
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.6e-170 603.2 409 72.1
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 1.6e-170 603.2 424 70.3
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 2.7e-170 602.4 422 69.4
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 4.7e-170 601.7 424 69.6
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 8.0e-170 600.9 414 70.8
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 8.0e-170 600.9 413 69.0
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 1.0e-169 600.5 416 71.6
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 1.4e-169 600.1 411 69.3
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 2.3e-169 599.4 402 72.6
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 3.0e-169 599.0 408 72.3
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 3.0e-169 599.0 407 74.0
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 6.7e-169 597.8 414 69.8
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 1.5e-168 596.7 406 73.4
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 3.3e-168 595.5 417 69.5
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 4.4e-168 595.1 421 69.4
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 2.2e-167 592.8 418 69.1
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 2.8e-167 592.4 416 70.2
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 4.8e-167 591.7 403 70.2
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 6.3e-167 591.3 451 68.5
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 8.3e-167 590.9 403 71.2
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.1e-166 590.5 415 72.0
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.1e-166 590.5 415 72.0
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.4e-166 590.1 424 68.9
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 4.1e-166 588.6 400 70.8
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 1.6e-165 586.6 411 70.8
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 2.7e-165 585.9 397 71.8
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 2.7e-165 585.9 414 70.3
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 5.9e-165 584.7 409 68.5
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 5.9e-165 584.7 411 69.1
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 5.9e-165 584.7 406 69.7
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 7.7e-165 584.3 423 67.8
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.3e-164 583.6 405 70.6
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 2.9e-164 582.4 417 67.4
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 1.1e-163 580.5 407 71.3
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 7.2e-163 577.8 404 70.0
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.2e-162 577.0 431 66.4
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.2e-162 577.0 470 61.7
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 3.6e-162 575.5 404 70.0
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 8.0e-162 574.3 426 66.9
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 4.8e-159 565.1 411 67.4
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 2.5e-155 552.7 423 64.8
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.3e-155 552.4 416 66.3
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 6.8e-153 544.7 403 66.0
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 9.8e-152 540.8 404 65.3
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.4e-150 537.0 404 66.3
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 1.8e-150 536.6 319 81.5
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 4.1e-150 535.4 409 62.6
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 5.4e-150 535.0 406 66.0
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 7.0e-150 534.6 408 62.3
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.2e-149 533.9 407 62.2
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 2.0e-149 533.1 409 61.9
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 2.0e-149 533.1 444 61.5
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 3.5e-149 532.3 410 62.0
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 3.5e-149 532.3 421 64.1
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 4.5e-149 531.9 409 62.1
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 2.3e-148 529.6 409 61.9
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 3.9e-148 528.9 409 61.6
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 5.0e-148 528.5 407 62.2
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 9.5e-147 524.2 391 67.3
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 3.6e-146 522.3 433 60.5
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.2e-144 517.3 358 68.7
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 2.6e-144 516.2 407 60.7
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 4.4e-144 515.4 407 60.4
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 8.3e-143 511.1 346 71.4
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 5.4e-142 508.4 349 70.8
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.3e-140 503.8 331 73.1
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 1.5e-139 500.4 330 72.1
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 8.0e-138 494.6 326 74.5
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 1.4e-134 483.8 475 51.8
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 2.1e-133 479.9 407 57.7
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 1.5e-131 473.8 422 56.9
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.8e-125 451.4 294 74.8
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.1e-121 439.5 313 69.0
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 4.0e-121 439.1 416 57.2
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.3e-115 419.5 297 66.7
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 6.2e-114 415.2 345 58.3
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 5.4e-110 402.1 278 70.1
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 7.8e-109 398.3 276 70.7
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 2.4e-102 376.7 405 48.6
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 1.3e-100 370.9 295 60.7
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.3e-100 370.2 300 65.3
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 1.1e-97 361.3 369 49.6
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 1.3e-92 344.4 331 56.2
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 2.3e-92 343.6 294 58.2
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 6.7e-92 342.0 335 55.5
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.5e-91 340.9 364 50.5
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 2.5e-91 340.1 245 67.3
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 1.1e-81 308.1 214 71.0
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 5.1e-76 289.3 158 88.6
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 8.8e-76 288.5 327 48.6
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 2.0e-75 287.3 261 53.6
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 4.5e-72 276.2 193 67.9
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.5e-62 244.6 243 50.2
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.8e-57 227.6 163 68.7
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 4.1e-49 199.9 144 69.4
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 2.8e-42 177.2 118 75.4
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 1.0e-39 168.7 122 64.8
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 8.6e-39 165.6 126 61.9
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.2e-37 161.8 326 32.5
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 1.8e-28 131.3 102 68.6
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 5.8e-19 99.8 61 75.4
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 3.7e-18 97.1 197 33.5
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 2.8e-13 80.9 58 62.1


User provided reference genes

Program Settings