Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.3e-180 636.3 325 100.0
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.6e-156 556.2 344 87.8
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.9e-145 518.8 345 82.3
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.9e-145 518.8 345 82.3
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 6.1e-143 511.1 344 80.2
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 2.3e-142 509.2 344 79.7
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 9.7e-141 503.8 345 81.2
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 4.5e-138 495.0 344 77.9
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 5.0e-137 491.5 346 76.9
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 3.2e-136 488.8 344 77.3
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 9.4e-136 487.3 344 76.5
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 1.8e-134 483.0 346 76.0
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 8.8e-134 480.7 336 77.1
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 3.7e-132 475.3 346 75.4
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 4.1e-131 471.9 344 74.7
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 1.2e-130 470.3 345 73.6
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.2e-130 470.3 345 74.8
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 1.6e-130 469.9 345 73.9
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 1.6e-130 469.9 344 72.7
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 2.6e-130 469.2 346 74.9
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.6e-130 469.2 348 73.9
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 4.5e-130 468.4 352 74.1
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 7.7e-130 467.6 358 72.6
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 7.7e-130 467.6 328 75.6
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 7.7e-130 467.6 344 73.8
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 7.7e-130 467.6 347 73.5
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 7.7e-130 467.6 338 73.7
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 7.7e-130 467.6 352 73.9
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.3e-129 466.8 347 73.8
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 2.2e-129 466.1 347 73.2
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 2.9e-129 465.7 345 74.2
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 3.8e-129 465.3 344 73.5
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 3.8e-129 465.3 345 73.9
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 6.5e-129 464.5 348 73.3
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 6.5e-129 464.5 345 74.5
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 3.2e-128 462.2 356 73.3
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 3.2e-128 462.2 329 75.1
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 4.2e-128 461.8 351 71.8
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 7.2e-128 461.1 348 72.7
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 9.4e-128 460.7 320 76.2
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 9.4e-128 460.7 351 71.5
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 9.4e-128 460.7 345 71.9
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.2e-127 460.3 350 72.6
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 1.2e-127 460.3 345 72.2
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 2.1e-127 459.5 344 71.8
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 2.1e-127 459.5 350 72.3
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 3.6e-127 458.8 348 71.8
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 4.7e-127 458.4 346 72.5
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 3.0e-126 455.7 346 71.1
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 4.0e-126 455.3 324 75.3
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 5.2e-126 454.9 352 71.6
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 5.2e-126 454.9 348 72.1
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 6.7e-126 454.5 348 72.4
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 6.7e-126 454.5 354 71.8
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 8.8e-126 454.1 348 72.1
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 1.1e-125 453.8 347 72.3
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.5e-125 453.4 342 72.5
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.5e-125 453.4 336 72.3
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 2.0e-125 453.0 348 71.8
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 2.6e-125 452.6 342 71.9
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 3.3e-125 452.2 349 69.9
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 4.4e-125 451.8 345 71.3
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.7e-125 451.4 348 71.6
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 7.5e-125 451.1 349 69.6
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 7.5e-125 451.1 349 69.6
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 9.7e-125 450.7 348 71.3
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 1.7e-124 449.9 330 73.9
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 1.7e-124 449.9 344 70.9
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 2.2e-124 449.5 345 71.0
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 1.1e-123 447.2 339 71.7
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.1e-123 447.2 346 71.7
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 2.4e-123 446.0 331 73.1
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 3.1e-123 445.7 328 73.2
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 5.3e-123 444.9 372 67.7
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 5.3e-123 444.9 327 74.0
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 9.1e-123 444.1 344 70.6
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 9.1e-123 444.1 328 72.9
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.6e-122 443.4 350 70.6
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 1.0e-121 440.7 332 70.2
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 1.0e-121 440.7 344 69.2
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 2.2e-121 439.5 327 73.1
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 1.5e-120 436.8 327 72.8
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 2.5e-120 436.0 345 71.6
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 2.1e-119 433.0 344 69.8
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 2.7e-119 432.6 344 70.6
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 6.1e-119 431.4 344 68.6
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 8.0e-119 431.0 347 69.2
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 1.0e-118 430.6 345 68.4
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 1.8e-118 429.9 343 67.9
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 2.3e-118 429.5 341 71.0
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 5.2e-118 428.3 349 68.2
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 1.5e-117 426.8 344 67.7
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 2.0e-117 426.4 344 67.2
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 3.4e-117 425.6 347 68.0
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 9.8e-117 424.1 353 66.9
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 1.3e-116 423.7 344 67.2
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 1.3e-116 423.7 344 67.2
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 1.3e-116 423.7 344 67.2
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 1.3e-116 423.7 324 69.4
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 2.8e-116 422.5 324 69.4
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 2.8e-116 422.5 324 69.1
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 2.8e-116 422.5 324 69.1
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 3.7e-116 422.2 348 67.0
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 6.3e-116 421.4 352 66.2
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 6.3e-116 421.4 324 69.1
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 3.1e-115 419.1 344 66.9
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 3.1e-115 419.1 344 66.9
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 3.1e-115 419.1 324 68.5
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 9.1e-115 417.5 344 66.0
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 1.2e-114 417.2 344 64.8
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 2.7e-114 416.0 324 68.5
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 4.5e-114 415.2 347 66.6
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 4.5e-114 415.2 324 68.8
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 3.8e-113 412.1 325 68.6
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 3.6e-111 405.6 365 62.2
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 3.4e-109 399.1 345 63.8
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 4.4e-109 398.7 385 60.5
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 5.0e-105 385.2 350 60.9
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 6.6e-105 384.8 299 68.9
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 6.6e-105 384.8 348 61.2
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 6.6e-105 384.8 347 61.1
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 6.6e-105 384.8 350 60.3
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 1.2e-103 380.6 324 65.1
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 1.6e-103 380.2 345 62.9
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 2.8e-103 379.4 351 59.5
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.4e-102 377.1 298 70.8
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.4e-102 377.1 298 70.8
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 1.2e-101 374.0 323 61.0
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.2e-100 369.8 316 61.7
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 6.4e-100 368.2 348 60.9
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 6.4e-100 368.2 348 60.9
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.0e-97 360.9 316 60.4
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 7.5e-93 344.7 231 76.2
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 2.9e-92 342.8 316 57.6
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 1.7e-89 333.6 274 66.8
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 3.4e-85 319.3 228 71.1
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 9.8e-85 317.8 319 53.9
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 1.1e-83 314.3 348 50.9
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.2e-82 310.8 325 52.9
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 6.4e-76 288.5 198 74.7
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 9.6e-72 274.6 185 78.4
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 3.8e-68 262.7 256 58.6
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 2.7e-66 256.5 246 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 6.4e-60 235.3 165 68.5
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 5.4e-59 232.3 301 46.5
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 7.1e-59 231.9 119 95.0
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 3.9e-57 226.1 123 89.4
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 1.5e-56 224.2 131 84.0
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 7.4e-56 221.9 215 60.9
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 4.0e-54 216.1 122 81.1
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 5.8e-45 185.7 164 62.2
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 1.3e-44 184.5 164 62.2
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 1.6e-42 177.6 164 60.4
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 2.4e-38 163.7 184 48.9
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 2.4e-38 163.7 184 48.9
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 1.8e-30 137.5 118 66.1
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 5.0e-28 129.4 92 73.9
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 7.2e-27 125.6 70 88.6
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 9.4e-27 125.2 128 55.5
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 8.5e-20 102.1 68 73.5
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 4.2e-19 99.8 178 41.0
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 1.1e-14 85.1 78 56.4
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 4.5e-13 79.7 91 53.8
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 8.8e-09 65.5 71 52.1
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 1.2e-08 65.1 42 81.0
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 9.7e-08 62.0 43 74.4
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 3.7e-07 60.1 36 72.2
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 3.1e-06 57.0 42 64.3


User provided reference genes

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