Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044449 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 9.6e-267 922.9 465 100.0
CSS0041108 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 9.2e-177 624.0 449 76.4
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 1.5e-171 606.7 473 67.4
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 5.8e-163 578.2 474 66.2
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 1.3e-162 577.0 522 60.9
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 1.8e-156 556.6 472 63.6
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 9.3e-137 491.1 475 56.8
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 2.6e-131 473.0 474 54.4
Atru.chr12.2311 Acer truncatum HOM05D004333 ORTHO05D005363 1.0e-130 471.1 479 54.3
Oeu001936.1 Olea europaea HOM05D004333 ORTHO05D005363 4.9e-130 468.8 472 52.1
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 1.1e-129 467.6 475 54.1
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 5.5e-129 465.3 476 54.4
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 2.4e-124 449.9 455 54.5
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 9.0e-124 448.0 476 51.5
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 4.5e-123 445.7 478 50.8
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 2.9e-122 443.0 471 51.2
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 1.9e-121 440.3 465 52.0
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 1.2e-120 437.6 479 49.9
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 1.0e-119 434.5 467 52.0
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 8.7e-119 431.4 465 51.2
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 3.7e-117 426.0 474 50.0
Gohir.A09G185800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 4.8e-117 425.6 468 49.6
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 6.3e-117 425.2 465 50.1
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 6.3e-117 425.2 465 52.0
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.4e-116 424.1 468 49.6
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.4e-116 424.1 468 49.8
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 2.4e-116 423.3 464 50.0
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.5e-115 420.6 468 49.1
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 3.4e-115 419.5 487 50.1
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.5e-115 419.1 468 49.8
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 7.7e-115 418.3 475 48.2
Gorai.006G202800 Gossypium raimondii HOM05D004333 ORTHO05D005363 1.0e-114 417.9 468 48.7
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.3e-114 417.5 468 48.9
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 6.5e-114 415.2 475 48.2
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 8.5e-114 414.8 476 50.2
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 1.4e-113 414.1 477 49.3
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 3.2e-113 412.9 459 51.0
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 7.2e-113 411.8 474 48.3
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 9.4e-113 411.4 469 48.8
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 1.2e-112 411.0 475 47.4
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 6.1e-112 408.7 474 50.0
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 1.0e-111 407.9 470 48.5
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 1.4e-111 407.5 474 47.9
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 2.3e-111 406.8 464 48.1
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 2.3e-111 406.8 463 47.9
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 6.7e-111 405.2 472 47.5
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 1.5e-110 404.1 513 45.4
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 2.0e-110 403.7 476 47.3
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 1.1e-108 397.9 481 47.0
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 1.4e-108 397.5 469 48.0
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 2.4e-108 396.7 474 46.2
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 4.1e-108 396.0 458 47.6
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 6.9e-108 395.2 462 46.3
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 6.9e-108 395.2 479 47.6
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 1.5e-107 394.0 463 47.1
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 1.5e-107 394.0 474 48.9
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 5.9e-107 392.1 462 46.3
CAN.G481.56 Capsicum annuum HOM05D004333 ORTHO05D005363 1.7e-106 390.6 475 46.7
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 5.0e-106 389.0 463 46.4
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 1.4e-105 387.5 461 47.1
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 4.2e-105 386.0 475 46.7
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 1.6e-104 384.0 463 46.0
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 2.7e-104 383.3 459 45.8
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 1.8e-103 380.6 480 45.6
Psat5g074840 Pisum sativum HOM05D004333 ORTHO05D005363 5.1e-103 379.0 478 45.0
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 8.8e-103 378.3 474 44.3
Actinidia34248 Actinidia chinensis HOM05D004333 ORTHO05D005363 1.5e-102 377.5 300 67.7
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 5.7e-102 375.6 474 44.1
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 9.7e-102 374.8 463 45.4
VMungo1309G1648 Vigna mungo HOM05D004333 ORTHO05D005363 1.3e-101 374.4 462 45.7
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 2.2e-101 373.6 473 44.4
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 1.1e-100 371.3 464 45.0
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 4.1e-100 369.4 470 43.2
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 7.0e-100 368.6 474 43.0
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 4.5e-99 365.9 474 42.6
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 5.9e-99 365.5 473 44.6
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 6.5e-98 362.1 473 42.9
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 1.5e-97 360.9 474 42.2
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 2.5e-97 360.1 475 44.8
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 5.5e-97 359.0 471 43.3
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 4.7e-96 355.9 469 44.1
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 6.1e-96 355.5 468 44.0
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 8.0e-96 355.1 470 43.2
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 1.0e-95 354.8 465 42.8
Eucgr.D00250 Eucalyptus grandis HOM05D004333 ORTHO05D005363 2.3e-95 353.6 473 44.0
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 4.0e-95 352.8 470 43.8
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 5.2e-95 352.4 468 43.2
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 8.8e-95 351.7 478 41.0
Carub.0006s2217 Capsella rubella HOM05D004333 ORTHO05D005363 3.3e-94 349.7 470 42.1
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 4.4e-94 349.4 469 43.3
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 4.4e-94 349.4 469 43.3
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 9.7e-94 348.2 468 42.9
Aa31LG11G3970 Aethionema arabicum HOM05D004333 ORTHO05D005363 3.1e-92 343.2 481 42.2
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 3.1e-92 343.2 472 44.7
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 7.2e-89 332.0 473 42.3
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 8.8e-87 325.1 469 41.2
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 4.2e-81 306.2 472 38.6
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 2.9e-69 266.9 459 37.7
HPP92_002817 Vanilla planifolia HOM05D004333 ORTHO05D005363 1.1e-65 255.0 475 32.8
SHI08286 Sapria himalayana HOM05D004333 ORTHO05D005363 4.4e-62 243.0 308 44.8
Gohir.D09G180800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 9.2e-60 235.3 214 55.1
CAN.G481.55 Capsicum annuum HOM05D004333 ORTHO05D005363 1.7e-58 231.1 311 43.7
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 2.8e-56 223.8 469 33.9
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 6.4e-53 212.6 202 60.4
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 1.9e-52 211.1 202 60.4
SEGI_10720 Sequoiadendron giganteum HOM05D004333 ORTHO05D005363 5.6e-49 199.5 479 29.9
Psat0s2221g0080 Pisum sativum HOM05D004333 ORTHO05D005363 1.4e-39 168.3 207 44.0
CAN.G3762.1 Capsicum annuum HOM05D004333 ORTHO05D005363 4.6e-35 153.3 202 44.6
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 2.3e-34 151.0 406 28.1
Nitab4.5_0004178g0040 Nicotiana tabacum HOM05D004333 ORTHO05D005363 8.7e-34 149.1 142 54.9
Duzib068G0008 Durio zibethinus HOM05D004333 ORTHO05D005363 2.8e-32 144.1 185 44.3
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 2.1e-27 127.9 491 25.5
Nitab4.5_0004178g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 2.4e-20 104.4 196 40.3
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 7.1e-20 102.8 106 51.9
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 8.7e-18 95.9 122 38.5
SHI08287 Sapria himalayana HOM05D004333 ORTHO05D005363 9.0e-15 85.9 149 34.2
SalBow4G2088 Salvia bowleyana HOM05D004333 ORTHO05D005363 4.5e-14 83.6 55 69.1
CBR_g48777 Chara braunii HOM05D004333 ORTHO05D005363 1.4e-12 78.6 133 34.6
SMO356G0059 Selaginella moellendorffii HOM05D004333 ORTHO05D005363 8.7e-10 69.3 96 37.5
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 3.7e-08 63.9 172 27.9


User provided reference genes

Program Settings