Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044117 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 5.7e-101 370.9 189 100.0
CSS0042394 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 7.0e-99 364.0 190 98.9
CSS0036613 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 7.7e-90 334.0 190 93.7
CSS0033742 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 4.4e-85 318.2 188 89.9
CSS0006872 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 9.2e-59 230.7 182 73.1
PGSC0003DMG400014494 Solanum tuberosum HOM05D003889 ORTHO05D004407 9.5e-56 220.7 179 70.4
Cc08_g08480 Coffea canephora HOM05D003889 ORTHO05D004407 3.6e-55 218.8 180 70.0
Migut.A00236 Erythranthe guttata HOM05D003889 ORTHO05D004407 3.6e-55 218.8 182 69.2
Actinidia13307 Actinidia chinensis HOM05D003889 ORTHO05D004407 6.2e-55 218.0 182 68.7
Dinv30246 Davidia involucrata HOM05D003889 ORTHO05D004407 8.1e-55 217.6 182 68.7
Lj7C708G10 Lonicera japonica HOM05D003889 ORTHO05D004407 8.1e-55 217.6 182 69.2
SGA_v2.0_scaffold243G44298 Striga asiatica HOM05D003889 ORTHO05D004407 8.1e-55 217.6 182 68.7
MBI04_g19381_MAGBIO Magnolia biondii HOM05D003889 ORTHO05D004407 1.4e-54 216.9 182 67.6
Sopen08g021990 Solanum pennellii HOM05D003889 ORTHO05D004407 1.8e-54 216.5 182 68.1
Aqoxy7G01675 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 2.3e-54 216.1 182 68.1
Ca_12818_v3 Cicer arietinum L. HOM05D003889 ORTHO05D004407 3.1e-54 215.7 182 69.2
Eucgr.C02886 Eucalyptus grandis HOM05D003889 ORTHO05D004407 4.0e-54 215.3 182 67.0
TAR636G2332 Trochodendron aralioides HOM05D003889 ORTHO05D004407 5.2e-54 214.9 182 69.2
Haze_21830 Corylus avellana HOM05D003889 ORTHO05D004407 8.9e-54 214.2 182 67.6
Lalb_Chr24g0402621 Lupinus albus HOM05D003889 ORTHO05D004407 8.9e-54 214.2 181 68.5
Sed0021057 Sechium edule HOM05D003889 ORTHO05D004407 8.9e-54 214.2 182 67.6
MELO3C011159.2 Cucumis melo HOM05D003889 ORTHO05D004407 1.2e-53 213.8 182 67.0
TPR.G12075 Trifolium pratense HOM05D003889 ORTHO05D004407 1.2e-53 213.8 182 68.1
CAN.G886.4 Capsicum annuum HOM05D003889 ORTHO05D004407 1.5e-53 213.4 182 67.0
Gohir.D13G192600 Gossypium hirsutum HOM05D003889 ORTHO05D004407 1.5e-53 213.4 182 67.0
Gorai.013G218600 Gossypium raimondii HOM05D003889 ORTHO05D004407 1.5e-53 213.4 182 67.0
Lj1g0022555 Lotus japonicus HOM05D003889 ORTHO05D004407 1.5e-53 213.4 182 68.1
Nn8g39185 Nelumbo nucifera HOM05D003889 ORTHO05D004407 1.5e-53 213.4 182 67.0
Oeu018088.1 Olea europaea HOM05D003889 ORTHO05D004407 1.5e-53 213.4 182 68.7
Oeu031571.1 Olea europaea HOM05D003889 ORTHO05D004407 1.5e-53 213.4 182 68.7
Solyc08g068110.1 Solanum lycopersicum HOM05D003889 ORTHO05D004407 2.6e-53 212.6 181 67.4
PSO198G0085 Papaver somniferum HOM05D003889 ORTHO05D004407 3.4e-53 212.2 182 67.0
PSO782G2669 Papaver somniferum HOM05D003889 ORTHO05D004407 3.4e-53 212.2 182 67.0
Psat6g033880 Pisum sativum HOM05D003889 ORTHO05D004407 4.4e-53 211.8 182 67.6
arahy.Tifrunner.gnm1.ann1.NKLE2F Arachis hypogaea HOM05D003889 ORTHO05D004407 5.8e-53 211.5 182 67.6
Nitab4.5_0000250g0220 Nicotiana tabacum HOM05D003889 ORTHO05D004407 5.8e-53 211.5 182 67.0
Peaxi162Scf00105g00416 Petunia axillaris HOM05D003889 ORTHO05D004407 5.8e-53 211.5 179 67.6
CsaV3_2G031090 Cucumis sativus L. HOM05D003889 ORTHO05D004407 7.5e-53 211.1 182 67.0
Glyma.14G140800 Glycine max HOM05D003889 ORTHO05D004407 7.5e-53 211.1 182 67.0
QL12p026194 Quercus lobata HOM05D003889 ORTHO05D004407 7.5e-53 211.1 182 66.5
SalBow4G0524 Salvia bowleyana HOM05D003889 ORTHO05D004407 7.5e-53 211.1 182 65.9
VMungo0647G0349 Vigna mungo HOM05D003889 ORTHO05D004407 7.5e-53 211.1 179 68.2
Atru.chr7.2295 Acer truncatum HOM05D003889 ORTHO05D004407 9.9e-53 210.7 182 67.6
Manes.03G066340 Manihot esculenta HOM05D003889 ORTHO05D004407 9.9e-53 210.7 182 68.1
DCAR_000737 Daucus carota HOM05D003889 ORTHO05D004407 1.3e-52 210.3 184 67.4
Potri.018G036600 Populus trichocarpa HOM05D003889 ORTHO05D004407 1.7e-52 209.9 182 68.1
Rhsim02G0183600 Rhododendron simsii HOM05D003889 ORTHO05D004407 1.7e-52 209.9 179 68.2
RcHm_v2.0_Chr6g0305641 Rosa chinensis HOM05D003889 ORTHO05D004407 1.7e-52 209.9 182 64.8
arahy.Tifrunner.gnm1.ann1.D2VLN9 Arachis hypogaea HOM05D003889 ORTHO05D004407 2.2e-52 209.5 182 67.0
HanXRQChr14g0435171 Helianthus annuus HOM05D003889 ORTHO05D004407 2.2e-52 209.5 182 66.5
ClCG08G012400 Citrullus lanatus HOM05D003889 ORTHO05D004407 3.7e-52 208.8 144 77.8
ECA233G2562 Erigeron canadensis HOM05D003889 ORTHO05D004407 3.7e-52 208.8 182 66.5
FvH4_2g36240 Fragaria vesca HOM05D003889 ORTHO05D004407 4.9e-52 208.4 182 65.4
FAN15G2018 Fragaria x ananassa HOM05D003889 ORTHO05D004407 4.9e-52 208.4 182 65.4
FAN27G2633 Fragaria x ananassa HOM05D003889 ORTHO05D004407 4.9e-52 208.4 182 65.4
Lsat_1_v5_gn_6_11181 Lactuca sativa HOM05D003889 ORTHO05D004407 4.9e-52 208.4 182 65.9
Medtr1g008600 Medicago truncatula HOM05D003889 ORTHO05D004407 4.9e-52 208.4 182 66.5
Nitab4.5_0008974g0010 Nicotiana tabacum HOM05D003889 ORTHO05D004407 4.9e-52 208.4 180 66.1
PGR044G0516 Punica granatum HOM05D003889 ORTHO05D004407 4.9e-52 208.4 182 66.5
Ciclev10007228m.g Citrus clementina HOM05D003889 ORTHO05D004407 6.4e-52 208.0 182 66.5
Duzib150G0348 Durio zibethinus HOM05D003889 ORTHO05D004407 6.4e-52 208.0 179 66.5
Phvul.008G158500 Phaseolus vulgaris HOM05D003889 ORTHO05D004407 6.4e-52 208.0 182 66.5
Prupe.1G453900 Prunus persica HOM05D003889 ORTHO05D004407 1.1e-51 207.2 182 66.5
AT4G32700 Arabidopsis thaliana HOM05D003889 ORTHO05D004407 1.9e-51 206.5 182 65.9
Os12g0291000 Oryza sativa ssp. japonica HOM05D003889 ORTHO05D004407 1.9e-51 206.5 192 62.5
Sp7g30460 Schrenkiella parvula HOM05D003889 ORTHO05D004407 2.4e-51 206.1 182 65.9
Carub.0007s0783 Capsella rubella HOM05D003889 ORTHO05D004407 7.1e-51 204.5 182 65.4
CiPaw.07G208100 Carya illinoinensis HOM05D003889 ORTHO05D004407 9.2e-51 204.1 182 64.8
Thhalv10024191m.g Eutrema salsugineum HOM05D003889 ORTHO05D004407 9.2e-51 204.1 182 65.4
CARHR240680 Cardamine hirsuta HOM05D003889 ORTHO05D004407 1.2e-50 203.8 182 65.4
AL7G19040 Arabidopsis lyrata HOM05D003889 ORTHO05D004407 1.6e-50 203.4 182 65.4
Thecc.09G038600 Theobroma cacao HOM05D003889 ORTHO05D004407 1.6e-50 203.4 182 66.5
Aa31LG2G16920 Aethionema arabicum HOM05D003889 ORTHO05D004407 2.1e-50 203.0 182 65.9
BcaB03g12757 Brassica carinata HOM05D003889 ORTHO05D004407 2.7e-50 202.6 182 64.8
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.7e-50 202.6 182 64.8
THA.LOC104818599 Tarenaya hassleriana HOM05D003889 ORTHO05D004407 2.7e-50 202.6 182 65.9
Ah.10g035410 Amaranthus hybridus HOM05D003889 ORTHO05D004407 3.5e-50 202.2 182 65.4
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 3.5e-50 202.2 182 64.8
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 3.5e-50 202.2 182 64.8
Sc23g0005860 Simmondsia chinensis HOM05D003889 ORTHO05D004407 3.5e-50 202.2 182 65.9
AUR62009357 Chenopodium quinoa HOM05D003889 ORTHO05D004407 4.6e-50 201.8 182 64.8
Cpa.g.sc78.93 Carica papaya HOM05D003889 ORTHO05D004407 6.0e-50 201.4 180 63.9
TWI34G0995 Tripterygium wilfordii HOM05D003889 ORTHO05D004407 6.0e-50 201.4 182 64.3
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 7.8e-50 201.1 182 64.3
Gohir.A13G185900 Gossypium hirsutum HOM05D003889 ORTHO05D004407 7.8e-50 201.1 182 64.8
FAN20G0810 Fragaria x ananassa HOM05D003889 ORTHO05D004407 1.0e-49 200.7 138 77.5
EL10Ac2g04091 Beta vulgaris HOM05D003889 ORTHO05D004407 2.3e-49 199.5 186 62.9
AUR62023039 Chenopodium quinoa HOM05D003889 ORTHO05D004407 2.3e-49 199.5 182 64.3
MD08G1120000 Malus domestica HOM05D003889 ORTHO05D004407 2.3e-49 199.5 182 63.7
COL.COLO4_18706 Corchorus olitorius HOM05D003889 ORTHO05D004407 3.0e-49 199.1 182 64.8
HPP92_002909 Vanilla planifolia HOM05D003889 ORTHO05D004407 3.9e-49 198.7 182 63.2
C03p87160 Brassica napus HOM05D003889 ORTHO05D004407 1.5e-48 196.8 182 63.2
ATR0916G007 Amborella trichopoda HOM05D003889 ORTHO05D004407 1.9e-48 196.4 179 62.0
BolC3t21018H Brassica oleracea HOM05D003889 ORTHO05D004407 1.9e-48 196.4 179 63.7
BraA08t33755Z Brassica rapa HOM05D003889 ORTHO05D004407 1.9e-48 196.4 179 63.7
Hund03446 Selenicereus undatus HOM05D003889 ORTHO05D004407 1.9e-48 196.4 182 64.3
A08p18050 Brassica napus HOM05D003889 ORTHO05D004407 2.5e-48 196.1 182 63.2
Zm00001eb409880 Zea mays HOM05D003889 ORTHO05D004407 9.5e-48 194.1 182 61.5
SHI18632 Sapria himalayana HOM05D003889 ORTHO05D004407 6.8e-46 188.0 181 60.8
unitig_37.g12219 Utricularia gibba HOM05D003889 ORTHO05D004407 5.8e-45 184.9 182 59.3
GSVIVG01035684001 Vitis vinifera HOM05D003889 ORTHO05D004407 4.6e-42 175.3 156 66.0
SEGI_30069 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 6.2e-39 164.9 159 59.1
Pp3c1_24760 Physcomitrium patens HOM05D003889 ORTHO05D004407 1.1e-38 164.1 181 51.9
AagrBONN_evm.TU.Sc2ySwM_117.2429 Anthoceros agrestis HOM05D003889 ORTHO05D004407 4.0e-38 162.2 182 54.9
Mapoly0097s0045 Marchantia polymorpha HOM05D003889 ORTHO05D004407 4.9e-36 155.2 185 49.2
Pp3c5_12930 Physcomitrium patens HOM05D003889 ORTHO05D004407 1.0e-33 147.5 185 48.6
CBR_g998 Chara braunii HOM05D003889 ORTHO05D004407 4.3e-24 115.5 110 53.6
CSS0033543 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 2.8e-23 112.8 91 72.5
Lsat_1_v5_gn_6_24580 Lactuca sativa HOM05D003889 ORTHO05D004407 4.8e-23 112.1 147 48.3
Lsat_1_v5_gn_4_66900 Lactuca sativa HOM05D003889 ORTHO05D004407 5.3e-22 108.6 102 61.8
Lsat_1_v5_gn_8_47340 Lactuca sativa HOM05D003889 ORTHO05D002785 1.5e-21 107.1 102 60.8
Cre16.g664301 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 3.4e-21 105.9 194 37.6
Actinidia24572 Actinidia chinensis HOM05D003889 ORTHO05D004407 2.3e-17 93.2 66 75.8
Cre08.g384390 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 3.9e-17 92.4 142 44.4
Aqoxy520s001 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 1.5e-16 90.5 69 72.5
MCO01G257 Micromonas commoda HOM05D003889 ORTHO05D004407 6.9e-14 81.6 176 35.2
SEGI_15374 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 2.6e-13 79.7 69 63.8
PRCOL_00006968 Prasinoderma coloniale HOM05D003889 ORTHO05D004407 1.0e-12 77.8 162 34.6
Haze_13402 Corylus avellana HOM05D003889 ORTHO05D004407 1.3e-12 77.4 96 52.1
Lsat_1_v5_gn_6_75601 Lactuca sativa HOM05D003889 ORTHO05D004407 9.3e-11 71.2 53 67.9
Lsat_1_v5_gn_3_5760 Lactuca sativa HOM05D003889 ORTHO05D004407 1.1e-08 64.3 110 40.9


User provided reference genes

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