Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044023 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 3.0e-232 808.1 412 100.0
CSS0003503 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 4.3e-226 787.7 418 96.4
CSS0032867 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 1.6e-209 732.6 426 88.7
Rhsim08G0029000 Rhododendron simsii HOM05D013671 ORTHO05D012833 1.7e-28 131.3 348 33.0
Lju1319C1T3 Lonicera japonica HOM05D028833 ORTHO05D012833 3.0e-22 110.5 402 27.1
Lj2P186T15 Lonicera japonica HOM05D021051 ORTHO05D012833 9.7e-21 105.5 369 29.0
Lj2C2T10 Lonicera japonica HOM05D021051 ORTHO05D012833 1.7e-20 104.8 355 28.5
Lj2P199T12 Lonicera japonica HOM05D021051 ORTHO05D012833 6.3e-20 102.8 177 34.5
Rhsim10G0034900 Rhododendron simsii HOM05D013671 ORTHO05D012833 1.2e-18 98.6 178 39.9
vmacro05204 Vaccinium macrocarpon HOM05D013671 ORTHO05D012833 1.6e-18 98.2 162 38.3
Dinv40328 Davidia involucrata HOM05D013671 ORTHO05D012833 5.9e-18 96.3 331 29.3
Lju1319C0T4 Lonicera japonica HOM05D028833 ORTHO05D012833 4.0e-14 83.6 262 27.1
Dinv30645 Davidia involucrata HOM05D013671 ORTHO05D012833 4.4e-13 80.1 251 28.7
Dinv06305 Davidia involucrata HOM05D013671 ORTHO05D012833 1.3e-09 68.6 107 35.5
Rhsim06G0096900 Rhododendron simsii HOM05D013671 ORTHO05D012833 2.2e-09 67.8 213 32.9
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 6.5e-09 66.2 99 40.4
Lj2P186T14 Lonicera japonica HOM05D021051 ORTHO05D012833 1.5e-08 65.1 75 44.0
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 1.9e-08 64.7 274 25.9
CSS0020144 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 1.2e-07 62.0 181 28.7
Prupe.5G157900 Prunus persica HOM05D013255 ORTHO05D011422 1.2e-07 62.0 189 26.5
Peaxi162Scf00359g00005 Petunia axillaris HOM05D000249 ORTHO05D000206 1.6e-07 61.6 118 34.7
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 3.6e-07 60.5 132 27.3
PGSC0003DMG400016578 Solanum tuberosum HOM05D000249 ORTHO05D000206 3.6e-07 60.5 129 31.0
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 4.7e-07 60.1 114 34.2
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 4.7e-07 60.1 163 30.7
Ah.09g227600 Amaranthus hybridus HOM05D037678 ORTHO05D012136 6.1e-07 59.7 187 25.7
PGR044G2517 Punica granatum HOM05D023452 ORTHO05D019051 8.0e-07 59.3 127 33.1
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 8.0e-07 59.3 122 32.0
Actinidia16043 Actinidia chinensis HOM05D000249 ORTHO05D000206 1.0e-06 58.9 114 33.3
CAN.G767.7 Capsicum annuum HOM05D000249 ORTHO05D000206 1.0e-06 58.9 98 35.7
Lj2P199T8 Lonicera japonica HOM05D021051 ORTHO05D012833 1.0e-06 58.9 83 36.1
Rhsim10G0150200 Rhododendron simsii HOM05D000249 ORTHO05D000206 1.0e-06 58.9 115 32.2
AT5G39560 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.4e-06 58.5 155 26.5
Cc07_g16260 Coffea canephora HOM05D000249 ORTHO05D000206 1.4e-06 58.5 98 32.7
Dinv19486 Davidia involucrata HOM05D000249 ORTHO05D000206 1.4e-06 58.5 113 31.0
Hma1.2p1_0375F.1_g138740 Hydrangea macrophylla HOM05D000249 ORTHO05D000206 2.3e-06 57.8 98 31.6
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.3e-06 57.8 119 32.8
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 3.0e-06 57.4 171 25.7
CAN.G65.201 Capsicum annuum HOM05D000249 ORTHO05D000206 4.0e-06 57.0 98 34.7
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 5.2e-06 56.6 175 27.4
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 5.2e-06 56.6 175 27.4
Nn1g05186 Nelumbo nucifera HOM05D000249 ORTHO05D000206 5.2e-06 56.6 98 35.7
CSS0028906 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 8.8e-06 55.8 114 33.3
Cc07_g16240 Coffea canephora HOM05D000249 ORTHO05D000206 8.8e-06 55.8 98 31.6


User provided reference genes

Program Settings