Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 7.7e-75 283.9 158 100.0
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 1.5e-57 226.5 158 75.9
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 2.1e-56 222.6 158 67.7
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 8.0e-56 220.7 159 69.2
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 4.4e-54 214.9 158 65.8
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 1.7e-50 203.0 159 66.0
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 2.2e-50 202.6 109 82.6
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 5.0e-50 201.4 110 80.9
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 1.1e-49 200.3 159 61.0
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 5.5e-49 198.0 110 79.1
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 1.2e-48 196.8 110 77.3
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 4.7e-48 194.9 110 77.3
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 8.0e-48 194.1 110 77.3
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 8.0e-48 194.1 110 77.3
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 8.0e-48 194.1 110 77.3
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 8.0e-48 194.1 110 77.3
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 1.0e-47 193.7 110 77.3
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 4.0e-47 191.8 110 75.5
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 6.8e-47 191.0 112 76.8
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 6.8e-47 191.0 110 75.5
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 6.8e-47 191.0 118 72.9
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 6.8e-47 191.0 110 75.5
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 6.8e-47 191.0 110 76.4
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 8.8e-47 190.7 113 75.2
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 8.8e-47 190.7 114 73.7
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 1.2e-46 190.3 110 76.4
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.2e-46 190.3 109 74.3
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 1.2e-46 190.3 110 76.4
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 1.5e-46 189.9 110 75.5
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 1.5e-46 189.9 110 75.5
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 1.5e-46 189.9 110 76.4
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 2.6e-46 189.1 111 75.7
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 3.4e-46 188.7 114 72.8
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 3.4e-46 188.7 110 75.5
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 5.7e-46 188.0 109 77.1
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 7.5e-46 187.6 114 73.7
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.3e-45 186.8 114 71.1
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 1.7e-45 186.4 107 77.6
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 1.7e-45 186.4 110 75.5
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 2.2e-45 186.0 107 76.6
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 2.8e-45 185.7 110 73.6
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 2.8e-45 185.7 111 71.2
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 4.8e-45 184.9 114 71.1
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 4.8e-45 184.9 110 71.8
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 6.3e-45 184.5 106 74.5
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 6.3e-45 184.5 114 71.9
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 8.3e-45 184.1 107 75.7
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 8.3e-45 184.1 108 75.0
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 8.3e-45 184.1 108 75.0
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 8.3e-45 184.1 112 72.3
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 8.3e-45 184.1 110 72.7
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 8.3e-45 184.1 110 71.8
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.1e-44 183.7 108 75.0
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 1.4e-44 183.3 110 73.6
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.4e-44 183.3 112 74.1
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 1.8e-44 183.0 107 74.8
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 1.8e-44 183.0 107 74.8
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 1.8e-44 183.0 107 74.8
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.8e-44 183.0 112 72.3
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 2.4e-44 182.6 110 71.8
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 2.4e-44 182.6 107 74.8
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 2.4e-44 182.6 110 73.6
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 4.1e-44 181.8 110 73.6
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 4.1e-44 181.8 112 71.4
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 9.1e-44 180.6 107 74.8
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 9.1e-44 180.6 108 75.0
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 9.1e-44 180.6 110 72.7
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 9.1e-44 180.6 108 72.2
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 1.2e-43 180.3 107 75.7
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 1.2e-43 180.3 112 70.5
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 2.0e-43 179.5 107 73.8
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 2.0e-43 179.5 122 67.2
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 2.0e-43 179.5 107 73.8
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 2.0e-43 179.5 108 74.1
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 3.5e-43 178.7 109 72.5
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 3.5e-43 178.7 107 72.0
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 3.5e-43 178.7 112 71.4
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 7.7e-43 177.6 112 68.8
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 7.7e-43 177.6 111 69.4
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 7.7e-43 177.6 118 69.5
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 7.7e-43 177.6 109 71.6
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.0e-42 177.2 110 68.2
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 1.0e-42 177.2 108 73.1
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 3.8e-42 175.3 128 64.8
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 5.0e-42 174.9 112 68.8
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 1.5e-41 173.3 138 59.4
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 3.2e-41 172.2 113 67.3
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 4.2e-41 171.8 108 72.2
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 5.5e-41 171.4 108 72.2
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 5.5e-41 171.4 113 69.0
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.6e-40 169.9 98 76.5
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 2.1e-40 169.5 110 68.2
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 6.1e-40 167.9 117 67.5
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 1.4e-39 166.8 104 71.2
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 1.2e-38 163.7 108 67.6
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 1.3e-37 160.2 95 73.7
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.3e-37 160.2 95 74.7
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 1.7e-37 159.8 152 52.0
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 4.9e-37 158.3 136 57.4
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 4.9e-37 158.3 164 50.0
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 1.3e-34 150.2 117 58.1
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 2.3e-34 149.4 114 58.8
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 1.0e-31 140.6 107 56.1
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 5.9e-27 124.8 103 54.4
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 2.3e-26 122.9 106 47.2
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 6.8e-23 111.3 108 46.3
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 2.0e-22 109.8 61 73.8
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 3.7e-21 105.5 96 49.0
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 2.4e-20 102.8 53 86.8
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 3.2e-20 102.4 53 86.8
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.0e-18 97.4 88 54.5
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 6.6e-18 94.7 53 77.4
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.1e-17 94.0 60 61.7
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 9.5e-17 90.9 51 70.6
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 4.7e-16 88.6 98 42.9
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 1.1e-15 87.4 51 74.5
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 6.8e-15 84.7 51 74.5
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 8.9e-15 84.3 50 74.0
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 5.8e-14 81.6 48 72.9
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 1.9e-12 76.6 45 75.6
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 4.3e-09 65.5 45 60.0


User provided reference genes

Program Settings