Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 0.0e+00 1464.5 979 100.0
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 0.0e+00 1076.6 832 94.0
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.5e-240 837.0 989 61.5
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 2.5e-240 836.3 1015 64.0
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 3.3e-224 782.7 992 58.0
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 2.8e-207 726.5 991 53.0
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 4.9e-204 715.7 700 60.0
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 1.1e-203 714.5 663 62.3
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 2.9e-196 689.9 1003 50.9
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 4.1e-195 686.0 696 58.8
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 6.2e-191 672.2 697 58.2
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 6.4e-188 662.1 674 59.1
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 7.8e-186 655.2 697 57.2
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 6.6e-185 652.1 992 50.0
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 1.1e-184 651.4 685 56.8
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 1.8e-182 644.0 680 57.6
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.5e-181 641.0 991 51.6
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 4.5e-181 639.4 700 57.0
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 1.3e-177 627.9 1034 57.4
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 1.1e-176 624.8 1011 55.8
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 3.3e-176 623.2 712 54.8
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 1.3e-175 621.3 715 53.7
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 3.8e-172 609.8 681 53.6
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 2.4e-171 607.1 1055 54.7
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 9.3e-171 605.1 681 55.2
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 2.1e-170 604.0 1011 54.7
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 3.5e-170 603.2 791 50.7
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 6.0e-170 602.4 676 54.0
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 3.9e-169 599.7 706 53.1
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.3e-167 594.7 713 53.0
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 1.3e-167 594.7 1010 55.1
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 1.6e-167 594.3 706 52.7
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 4.8e-167 592.8 1001 54.0
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 6.2e-167 592.4 764 50.4
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.8e-166 590.9 710 52.5
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.4e-166 590.5 992 52.6
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 2.4e-166 590.5 704 53.1
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 2.6e-165 587.0 1002 51.8
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 1.0e-164 585.1 991 48.0
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 4.6e-162 576.2 586 59.4
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 3.0e-161 573.5 709 53.2
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 1.3e-159 568.2 686 52.2
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 2.1e-159 567.4 877 52.8
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 3.1e-158 563.5 723 49.4
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 1.3e-156 558.1 689 50.2
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 2.2e-156 557.4 703 48.8
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 3.7e-151 540.0 743 48.2
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 3.7e-151 540.0 690 48.3
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 2.6e-149 533.9 591 54.3
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 6.5e-148 529.3 692 48.6
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 8.5e-148 528.9 775 47.5
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 1.1e-147 528.5 832 54.8
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 2.7e-146 523.9 684 50.0
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 5.1e-145 519.6 692 47.7
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 5.1e-145 519.6 546 57.5
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 7.4e-144 515.8 853 50.6
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 1.7e-143 514.6 532 58.5
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 1.2e-141 508.4 1001 49.4
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 1.5e-141 508.1 539 58.1
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 3.4e-141 506.9 548 57.1
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 4.7e-138 496.5 847 50.2
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 7.4e-136 489.2 831 49.7
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 3.7e-135 486.9 581 52.8
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 5.0e-132 476.5 695 46.3
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 1.2e-130 471.9 643 64.9
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 8.0e-130 469.2 696 46.4
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 6.7e-129 466.1 524 54.4
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 1.2e-128 465.3 698 46.4
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 2.6e-128 464.2 732 44.4
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.3e-127 461.8 357 71.1
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 1.3e-127 461.8 867 54.7
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 6.3e-127 459.5 691 46.7
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 3.1e-126 457.2 691 45.4
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 3.8e-124 450.3 718 43.9
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 3.8e-124 450.3 691 46.2
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 6.5e-124 449.5 720 44.0
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 1.5e-123 448.4 550 51.3
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 3.2e-123 447.2 724 44.3
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 5.5e-123 446.4 563 50.6
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 2.7e-122 444.1 694 45.4
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 8.0e-122 442.6 530 53.0
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 4.4e-120 436.8 355 67.9
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 9.1e-118 429.1 659 44.0
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 4.5e-117 426.8 509 54.0
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 1.8e-113 414.8 592 47.1
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 5.2e-113 413.3 761 40.3
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 5.6e-107 393.3 756 40.5
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 4.7e-106 390.2 1017 36.2
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 4.9e-103 380.2 544 47.8
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 1.0e-100 372.5 767 40.0
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 8.0e-98 362.8 520 47.5
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 5.8e-96 356.7 704 44.3
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 2.3e-92 344.7 818 36.2
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 1.4e-89 335.5 496 46.4
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 2.0e-88 331.6 789 35.6
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 1.1e-83 315.8 549 42.4
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 4.3e-83 313.9 610 41.8
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 1.2e-80 305.8 718 50.7
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 7.3e-67 260.0 507 41.4
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 4.0e-65 254.2 558 36.6
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 3.2e-62 244.6 764 31.9
Cc05_g14010 Coffea canephora HOM05D006512 ORTHO05D008027 4.3e-43 181.0 143 66.4
GSVIVG01037689001 Vitis vinifera HOM05D006512 ORTHO05D008027 5.7e-43 180.6 144 63.9
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 9.0e-41 173.3 563 33.0
HanXRQChr11g0335921 Helianthus annuus HOM05D006512 ORTHO05D008027 4.5e-40 171.0 140 64.3
QL08p009130 Quercus lobata HOM05D006512 ORTHO05D008027 3.3e-35 154.8 143 61.5
CARHR268440 Cardamine hirsuta HOM05D006512 ORTHO05D008027 2.8e-34 151.8 145 55.9
Eucgr.F00737 Eucalyptus grandis HOM05D006512 ORTHO05D008027 1.8e-33 149.1 149 58.4
Solyc10g006250.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 9.1e-33 146.7 143 55.2
CANSAT56G4300 Cannabis sativa HOM05D006512 ORTHO05D008027 5.0e-31 141.0 137 58.4
MD11G1213100 Malus domestica HOM05D006512 ORTHO05D008027 5.0e-31 141.0 150 53.3
Lalb_Chr17g0348641 Lupinus albus HOM05D006512 ORTHO05D008027 9.7e-27 126.7 142 52.1
Actinidia02676 Actinidia chinensis HOM05D000736 ORTHO05D008027 1.7e-15 89.4 131 47.3
VMungo0251G0907 Vigna mungo HOM05D001291 ORTHO05D008027 2.3e-12 79.0 72 58.3
Nn6g32350 Nelumbo nucifera HOM05D006512 ORTHO05D008027 2.6e-11 75.5 162 40.7
Actinidia32261 Actinidia chinensis HOM05D006512 ORTHO05D008027 5.7e-11 74.3 101 47.5
Cre11.g481700 Chlamydomonas reinhardtii HOM05D006512 ORTHO05D008027 1.1e-09 70.1 68 48.5
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-08 66.6 81 43.2
Cpa.g.c37452 Carica papaya HOM05D006512 ORTHO05D008027 1.7e-07 62.8 69 59.4
PRCOL_00002654 Prasinoderma coloniale HOM05D002594 ORTHO05D003499 6.5e-07 60.8 55 45.5


User provided reference genes

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