Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043283 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 6.5e-125 450.7 218 100.0
CSS0019957 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.7e-93 346.3 252 71.8
CSS0002423 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.3e-92 342.0 250 71.6
CSS0037116 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.1e-91 339.3 250 71.2
Actinidia22411 Actinidia chinensis HOM05D005859 ORTHO05D007576 2.9e-88 328.9 249 68.3
QL12p026076 Quercus lobata HOM05D005859 ORTHO05D007576 3.5e-86 322.0 249 66.7
Haze_21816 Corylus avellana HOM05D005859 ORTHO05D007576 4.6e-86 321.6 249 65.9
Cfa013324 Carpinus fangiana HOM05D005859 ORTHO05D007576 7.8e-86 320.9 249 65.9
Rhsim05G0088100 Rhododendron simsii HOM05D005859 ORTHO05D007576 7.8e-86 320.9 249 67.1
Dinv07263 Davidia involucrata HOM05D005859 ORTHO05D007576 1.3e-85 320.1 249 67.1
CSS0022235 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.1e-84 317.0 252 67.1
Ciclev10009277m.g Citrus clementina HOM05D005859 ORTHO05D007576 1.5e-84 316.6 249 66.3
COL.COLO4_34684 Corchorus olitorius HOM05D005859 ORTHO05D007576 2.5e-84 315.8 248 64.9
Glyma.04G078700 Glycine max HOM05D005859 ORTHO05D007576 3.3e-84 315.5 249 66.7
Rhsim02G0125100 Rhododendron simsii HOM05D005859 ORTHO05D007576 5.6e-84 314.7 249 66.3
CiPaw.07G208600 Carya illinoinensis HOM05D005859 ORTHO05D007576 9.5e-84 313.9 248 65.7
Duzib151G0554 Durio zibethinus HOM05D005859 ORTHO05D007576 1.2e-83 313.5 248 64.9
Atru.chr7.2673 Acer truncatum HOM05D005859 ORTHO05D007576 2.8e-83 312.4 249 65.5
ClCG08G012440 Citrullus lanatus HOM05D005859 ORTHO05D007576 4.7e-83 311.6 248 65.7
CANSAT64G2965 Cannabis sativa HOM05D005859 ORTHO05D007576 6.2e-83 311.2 250 64.4
Thecc.04G293600 Theobroma cacao HOM05D005859 ORTHO05D007576 6.2e-83 311.2 249 65.1
Cpa.g.sc10.203 Carica papaya HOM05D005859 ORTHO05D007576 8.1e-83 310.8 249 64.3
Potri.006G277100 Populus trichocarpa HOM05D005859 ORTHO05D007576 1.1e-82 310.5 248 64.5
Prupe.1G454800 Prunus persica HOM05D005859 ORTHO05D007576 1.1e-82 310.5 248 65.3
Sabra06G0214800 Salix brachista HOM05D005859 ORTHO05D007576 1.4e-82 310.1 248 64.5
Duzib151G0446 Durio zibethinus HOM05D005859 ORTHO05D007576 1.8e-82 309.7 248 64.5
MELO3C011163.2 Cucumis melo HOM05D005859 ORTHO05D007576 3.1e-82 308.9 248 65.3
TWI63G1176 Tripterygium wilfordii HOM05D005859 ORTHO05D007576 3.1e-82 308.9 249 63.1
Gohir.A09G063900 Gossypium hirsutum HOM05D005859 ORTHO05D007576 4.0e-82 308.5 250 64.0
Potri.018G003900 Populus trichocarpa HOM05D005859 ORTHO05D007576 4.0e-82 308.5 250 64.4
VMungo1309G0784 Vigna mungo HOM05D005859 ORTHO05D007576 5.2e-82 308.1 249 65.1
Phvul.009G104500 Phaseolus vulgaris HOM05D005859 ORTHO05D007576 6.8e-82 307.8 249 65.1
CsaV3_2G031130 Cucumis sativus L. HOM05D005859 ORTHO05D007576 8.9e-82 307.4 248 64.9
Gohir.D09G062800 Gossypium hirsutum HOM05D005859 ORTHO05D007576 8.9e-82 307.4 248 64.1
Lj1g0020437 Lotus japonicus HOM05D005859 ORTHO05D007576 1.2e-81 307.0 249 64.3
Manes.08G049200 Manihot esculenta HOM05D005859 ORTHO05D007576 2.0e-81 306.2 248 64.1
Gorai.006G077600 Gossypium raimondii HOM05D005859 ORTHO05D007576 7.6e-81 304.3 248 63.7
RcHm_v2.0_Chr6g0305541 Rosa chinensis HOM05D005859 ORTHO05D007576 1.3e-80 303.5 248 62.9
Glyma.06G080300 Glycine max HOM05D005859 ORTHO05D007576 2.2e-80 302.8 249 64.7
Ca_15630_v3 Cicer arietinum L. HOM05D005859 ORTHO05D007576 3.8e-80 302.0 249 64.3
DCAR_010833 Daucus carota HOM05D005859 ORTHO05D007576 3.8e-80 302.0 248 64.1
MD08G1121000 Malus domestica HOM05D005859 ORTHO05D007576 8.4e-80 300.8 246 63.4
Psat5g022960 Pisum sativum HOM05D005859 ORTHO05D007576 8.4e-80 300.8 248 62.9
Sc10g0009100 Simmondsia chinensis HOM05D005859 ORTHO05D007576 1.4e-79 300.1 248 62.5
Sed0013908 Sechium edule HOM05D005859 ORTHO05D007576 1.9e-79 299.7 248 63.3
Sabra18G0001700 Salix brachista HOM05D005859 ORTHO05D007576 5.4e-79 298.1 250 62.8
FvH4_2g36340 Fragaria vesca HOM05D005859 ORTHO05D007576 9.2e-79 297.4 248 62.1
FAN15G0047 Fragaria x ananassa HOM05D005859 ORTHO05D007576 9.2e-79 297.4 248 62.1
Eucgr.A02021 Eucalyptus grandis HOM05D005859 ORTHO05D007576 1.2e-78 297.0 248 61.7
Sabra18G0009500 Salix brachista HOM05D005859 ORTHO05D007576 1.2e-78 297.0 250 62.8
FAN20G1422 Fragaria x ananassa HOM05D005859 ORTHO05D007576 1.6e-78 296.6 248 61.7
Sed0022456 Sechium edule HOM05D005859 ORTHO05D007576 1.6e-78 296.6 248 62.9
Lalb_Chr11g0064301 Lupinus albus HOM05D005859 ORTHO05D007576 2.1e-78 296.2 249 62.2
THA.LOC104814931 Tarenaya hassleriana HOM05D005859 ORTHO05D007576 4.6e-78 295.0 248 62.1
TPR.G1368 Trifolium pratense HOM05D005859 ORTHO05D007576 4.6e-78 295.0 248 62.1
Medtr3g109360 Medicago truncatula HOM05D005859 ORTHO05D007576 7.8e-78 294.3 248 62.1
ECA238G0328 Erigeron canadensis HOM05D005859 ORTHO05D007576 1.7e-77 293.1 246 62.6
PGR042G0112 Punica granatum HOM05D005859 ORTHO05D007576 3.0e-77 292.4 248 61.3
Ah.07g199340 Amaranthus hybridus HOM05D005859 ORTHO05D007576 8.6e-77 290.8 252 59.9
AUR62007184 Chenopodium quinoa HOM05D005859 ORTHO05D007576 8.6e-77 290.8 250 59.6
TAR625G0738 Trochodendron aralioides HOM05D005859 ORTHO05D007576 8.6e-77 290.8 261 59.0
CSS0049229 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.9e-76 289.7 215 70.7
Oeu056039.1 Olea europaea HOM05D005859 ORTHO05D007576 1.9e-76 289.7 254 59.8
Nn2g12765 Nelumbo nucifera HOM05D005859 ORTHO05D007576 4.3e-76 288.5 256 60.5
CSS0005155 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.2e-75 287.0 242 64.5
Lsat_1_v5_gn_5_41801 Lactuca sativa HOM05D005859 ORTHO05D007576 1.2e-75 287.0 248 61.3
EL10Ac5g12246 Beta vulgaris HOM05D005859 ORTHO05D007576 1.2e-73 280.4 250 59.2
MSTRG.12122 Avicennia marina HOM05D005859 ORTHO05D007576 9.9e-73 277.3 250 59.2
Nitab4.5_0003379g0070 Nicotiana tabacum HOM05D005859 ORTHO05D007576 1.7e-72 276.6 249 59.8
Migut.A01131 Erythranthe guttata HOM05D005859 ORTHO05D007576 2.9e-72 275.8 250 59.6
Solyc02g068650.2 Solanum lycopersicum HOM05D005859 ORTHO05D007576 3.8e-72 275.4 239 60.7
Nitab4.5_0006282g0050 Nicotiana tabacum HOM05D005859 ORTHO05D007576 6.4e-72 274.6 249 59.8
CAN.G149.19 Capsicum annuum HOM05D005859 ORTHO05D007576 8.4e-72 274.2 236 61.0
AL6G36490 Arabidopsis lyrata HOM05D005859 ORTHO05D007576 1.1e-71 273.9 242 59.5
A06p35610 Brassica napus HOM05D005859 ORTHO05D007576 1.4e-71 273.5 249 57.8
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 1.9e-71 273.1 249 57.8
Cc09_g05860 Coffea canephora HOM05D005859 ORTHO05D007576 1.9e-71 273.1 244 59.0
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 2.4e-71 272.7 249 57.8
Carub.0006s2269 Capsella rubella HOM05D005859 ORTHO05D007576 3.2e-71 272.3 242 59.1
Aa31LG11G4050 Aethionema arabicum HOM05D005859 ORTHO05D007576 5.4e-71 271.6 247 59.9
Aqoxy7G02813 Aquilegia oxysepala HOM05D005859 ORTHO05D007576 7.1e-71 271.2 265 56.2
AT5G24840 Arabidopsis thaliana HOM05D005859 ORTHO05D007576 7.1e-71 271.2 251 58.6
PGSC0003DMG400010428 Solanum tuberosum HOM05D005859 ORTHO05D007576 9.3e-71 270.8 240 59.6
SGA_v2.0_scaffold104G30176 Striga asiatica HOM05D005859 ORTHO05D007576 9.3e-71 270.8 244 59.0
CARHR188610 Cardamine hirsuta HOM05D005859 ORTHO05D007576 1.6e-70 270.0 248 57.7
Thhalv10004821m.g Eutrema salsugineum HOM05D005859 ORTHO05D007576 1.6e-70 270.0 248 57.3
Sopen02g017820 Solanum pennellii HOM05D005859 ORTHO05D007576 2.1e-70 269.6 238 59.7
AUR62018819 Chenopodium quinoa HOM05D005859 ORTHO05D007576 3.5e-70 268.9 226 61.1
Sp2g22610 Schrenkiella parvula HOM05D005859 ORTHO05D007576 2.3e-69 266.2 248 56.9
MD15G1100000 Malus domestica HOM05D005859 ORTHO05D007576 3.3e-68 262.3 221 62.9
SalBow1G3786 Salvia bowleyana HOM05D005859 ORTHO05D007576 3.3e-68 262.3 250 57.2
BcaB04g19801 Brassica carinata HOM05D005859 ORTHO05D007576 7.3e-68 261.2 248 56.0
PSO063G7086 Papaver somniferum HOM05D005859 ORTHO05D007576 2.8e-67 259.2 262 54.6
Peaxi162Scf00149g00014 Petunia axillaris HOM05D005859 ORTHO05D007576 1.4e-66 256.9 247 57.1
MBI07_g41262_MAGBIO Magnolia biondii HOM05D005859 ORTHO05D007576 1.8e-66 256.5 246 55.7
BcaC04g23549 Brassica carinata HOM05D005859 ORTHO05D007576 2.4e-66 256.1 249 54.6
CSS0033509 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.0e-65 253.1 201 65.7
HPP92_010546 Vanilla planifolia HOM05D005859 ORTHO05D007576 5.8e-65 251.5 242 55.0
HPP92_010527 Vanilla planifolia HOM05D005859 ORTHO05D007576 8.4e-64 247.7 239 54.8
unitig_21.g20313 Utricularia gibba HOM05D005859 ORTHO05D007576 1.1e-63 247.3 236 55.5
Zm00001eb208790 Zea mays HOM05D005859 ORTHO05D007576 1.9e-63 246.5 240 55.8
CSS0012487 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 9.3e-63 244.2 214 61.7
Pp3c24_9600 Physcomitrium patens HOM05D005859 ORTHO05D007576 4.0e-58 228.8 248 49.6
SEGI_16955 Sequoiadendron giganteum HOM05D005859 ORTHO05D007576 1.2e-57 227.3 267 47.6
ATR0697G154 Amborella trichopoda HOM05D005859 ORTHO05D007576 2.6e-57 226.1 240 50.0
SMO358G0125 Selaginella moellendorffii HOM05D005859 ORTHO05D007576 7.1e-55 218.0 238 48.7
Mapoly0026s0057 Marchantia polymorpha HOM05D005859 ORTHO05D007576 1.0e-53 214.2 263 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1368 Anthoceros agrestis HOM05D005859 ORTHO05D007576 6.7e-53 211.5 254 46.1
HanXRQChr14g0440281 Helianthus annuus HOM05D005859 ORTHO05D007576 4.0e-50 202.2 191 56.0
GSVIVG01035552001 Vitis vinifera HOM05D005859 ORTHO05D007576 6.9e-50 201.4 243 51.0
CBR_g63067 Chara braunii HOM05D005859 ORTHO05D007576 9.0e-50 201.1 267 43.1
Cre07.g314550 Chlamydomonas reinhardtii HOM05D005859 ORTHO05D007576 3.0e-45 186.0 255 40.8
CDE05G2856 Ceratophyllum demersum HOM05D005859 ORTHO05D007576 4.1e-42 175.6 195 52.8
MCO01G481 Micromonas commoda HOM05D005859 ORTHO05D007576 5.0e-40 168.7 233 40.3
HanXRQChr07g0193381 Helianthus annuus HOM05D005859 ORTHO05D007576 3.2e-39 166.0 137 62.0
HanXRQChr09g0275211 Helianthus annuus HOM05D005859 ORTHO05D007576 3.2e-39 166.0 141 60.3
Lj2P347T15 Lonicera japonica HOM05D005859 ORTHO05D007576 7.2e-39 164.9 136 63.2
HPP92_010585 Vanilla planifolia HOM05D005859 ORTHO05D007576 9.3e-39 164.5 186 50.0
CSS0016583 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.0e-37 159.5 119 70.6
PRCOL_00003713 Prasinoderma coloniale HOM05D005859 ORTHO05D007576 7.4e-36 154.8 233 41.6
CSS0020153 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 9.7e-36 154.5 117 65.8
BolC9t53628H Brassica oleracea HOM05D005859 ORTHO05D007576 4.6e-30 135.6 118 56.8
Haze_26141 Corylus avellana HOM05D005859 ORTHO05D007576 3.3e-28 129.4 233 33.9
Os06g0236900 Oryza sativa ssp. japonica HOM05D005859 ORTHO05D007576 4.4e-28 129.0 81 72.8
HPP92_010538 Vanilla planifolia HOM05D005859 ORTHO05D007576 9.7e-28 127.9 82 70.7
Dinv07265 Davidia involucrata HOM05D005859 ORTHO05D007576 3.7e-27 125.9 136 54.4
HPP92_010638 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.1e-26 124.4 116 54.3
HPP92_010304 Vanilla planifolia HOM05D005859 ORTHO05D007576 8.5e-24 114.8 185 38.9
BraA06t26486Z Brassica rapa HOM05D000880 ORTHO05D008158 1.0e-16 91.3 79 60.8
C09p07080 Brassica napus HOM05D000880 ORTHO05D008158 2.5e-15 86.7 81 54.3
ATR1096G015 Amborella trichopoda HOM05D005859 ORTHO05D007576 3.3e-12 76.3 54 59.3
HPP92_010586 Vanilla planifolia HOM05D005859 ORTHO05D007576 4.4e-12 75.9 49 71.4
A09p06400 Brassica napus HOM05D005859 ORTHO05D007576 7.5e-12 75.1 48 68.8
BolC9t53624H Brassica oleracea HOM05D000880 ORTHO05D008158 8.5e-08 61.6 34 79.4


User provided reference genes

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