Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043043 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D007336 3.8e-27 124.0 59 100.0
CSS0014801 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D007336 6.7e-08 60.1 31 83.9
Actinidia07228 Actinidia chinensis HOM05D000144 ORTHO05D007336 8.8e-08 59.7 31 80.6
Actinidia24194 Actinidia chinensis HOM05D000144 ORTHO05D007336 8.8e-08 59.7 31 80.6
Rhsim02G0084400 Rhododendron simsii HOM05D000144 ORTHO05D007336 1.1e-07 59.3 31 77.4
Eucgr.J00461 Eucalyptus grandis HOM05D000144 ORTHO05D007336 2.6e-07 58.2 31 80.6
arahy.Tifrunner.gnm1.ann1.GZ1FF1 Arachis hypogaea HOM05D000144 ORTHO05D007336 3.3e-07 57.8 31 77.4
arahy.Tifrunner.gnm1.ann1.LG5WAH Arachis hypogaea HOM05D000144 ORTHO05D007336 3.3e-07 57.8 31 77.4
Gohir.A07G108500 Gossypium hirsutum HOM05D000144 ORTHO05D007336 5.7e-07 57.0 31 77.4
Gohir.A07G108720 Gossypium hirsutum HOM05D000144 ORTHO05D007336 5.7e-07 57.0 31 77.4
Gohir.D07G112300 Gossypium hirsutum HOM05D000144 ORTHO05D007336 5.7e-07 57.0 31 77.4
Gorai.001G120700 Gossypium raimondii HOM05D000144 ORTHO05D007336 5.7e-07 57.0 31 77.4
Lj2C989G2 Lonicera japonica HOM05D000144 ORTHO05D007336 5.7e-07 57.0 31 74.2
PGR119G0139 Punica granatum HOM05D000144 ORTHO05D007336 5.7e-07 57.0 31 77.4
Glyma.12G182700 Glycine max HOM05D000144 ORTHO05D007336 7.4e-07 56.6 31 77.4
Nn6g34999 Nelumbo nucifera HOM05D000144 ORTHO05D007336 7.4e-07 56.6 31 77.4
VMungo1080G0899 Vigna mungo HOM05D000144 ORTHO05D007336 7.4e-07 56.6 31 77.4
AUR62039246 Chenopodium quinoa HOM05D000144 ORTHO05D007336 9.7e-07 56.2 31 71.0
Duzib170G0934 Durio zibethinus HOM05D000144 ORTHO05D007336 9.7e-07 56.2 31 74.2
Thecc.09G288400 Theobroma cacao HOM05D000144 ORTHO05D007336 9.7e-07 56.2 31 74.2
Aa31LG4G14360 Aethionema arabicum HOM05D000144 ORTHO05D007336 1.3e-06 55.8 31 71.0
AUR62009798 Chenopodium quinoa HOM05D000144 ORTHO05D007336 1.3e-06 55.8 31 67.7
DCAR_006150 Daucus carota HOM05D000144 ORTHO05D007336 1.3e-06 55.8 31 71.0
BcaB01g01158 Brassica carinata HOM05D000144 ORTHO05D007336 1.7e-06 55.5 31 67.7
CiPaw.14G102500 Carya illinoinensis HOM05D000144 ORTHO05D007336 1.7e-06 55.5 31 74.2
COL.COLO4_19942 Corchorus olitorius HOM05D000144 ORTHO05D007336 1.7e-06 55.5 28 85.7
Dinv42577 Davidia involucrata HOM05D000144 ORTHO05D007336 1.7e-06 55.5 31 74.2
Lalb_Chr14g0374131 Lupinus albus HOM05D000144 ORTHO05D007336 1.7e-06 55.5 28 82.1
PSO339G1139 Papaver somniferum HOM05D000144 ORTHO05D007336 1.7e-06 55.5 31 74.2
PSO384G3065 Papaver somniferum HOM05D000144 ORTHO05D007336 1.7e-06 55.5 31 74.2
TWI79G0633 Tripterygium wilfordii HOM05D000144 ORTHO05D007336 1.7e-06 55.5 28 89.3
TWI79G1360 Tripterygium wilfordii HOM05D000144 ORTHO05D007336 1.7e-06 55.5 28 89.3
AL5G22730 Arabidopsis lyrata HOM05D000144 ORTHO05D007336 2.2e-06 55.1 31 71.0
AT3G44600 Arabidopsis thaliana HOM05D000144 ORTHO05D007336 2.2e-06 55.1 31 71.0
CARHR151580 Cardamine hirsuta HOM05D000144 ORTHO05D007336 2.2e-06 55.1 31 71.0
Glyma.13G318300 Glycine max HOM05D000144 ORTHO05D007336 2.2e-06 55.1 31 71.0
Sp5g16610 Schrenkiella parvula HOM05D000144 ORTHO05D007336 2.2e-06 55.1 31 71.0
THA.LOC104799539 Tarenaya hassleriana HOM05D000144 ORTHO05D007336 2.2e-06 55.1 31 71.0
Aqoxy4G02840 Aquilegia oxysepala HOM05D000144 ORTHO05D007336 2.8e-06 54.7 31 67.7
Cpa.g.sc31.94 Carica papaya HOM05D000144 ORTHO05D007336 2.8e-06 54.7 31 71.0
ClCG01G012500 Citrullus lanatus HOM05D000144 ORTHO05D007336 2.8e-06 54.7 31 71.0
MELO3C004752.2 Cucumis melo HOM05D000144 ORTHO05D007336 2.8e-06 54.7 31 71.0
CsaV3_1G014630 Cucumis sativus L. HOM05D000144 ORTHO05D007336 2.8e-06 54.7 31 71.0
TAR636G0978 Trochodendron aralioides HOM05D000144 ORTHO05D007336 2.8e-06 54.7 31 67.7
Potri.009G146400 Populus trichocarpa HOM05D000144 ORTHO05D007336 3.7e-06 54.3 31 74.2
Sabra09G0113200 Salix brachista HOM05D000144 ORTHO05D007336 3.7e-06 54.3 31 74.2
Sabra09G0115600 Salix brachista HOM05D000144 ORTHO05D007336 3.7e-06 54.3 31 74.2
TPR.G23395 Trifolium pratense HOM05D000144 ORTHO05D007336 4.8e-06 53.9 31 67.7
BcaC01g02060 Brassica carinata HOM05D000144 ORTHO05D007336 6.3e-06 53.5 31 67.7
A06p21820 Brassica napus HOM05D000144 ORTHO05D007336 6.3e-06 53.5 31 67.7
C03p69060 Brassica napus HOM05D000144 ORTHO05D007336 6.3e-06 53.5 31 67.7
BolC3t19161H Brassica oleracea HOM05D000144 ORTHO05D007336 6.3e-06 53.5 31 67.7
BraA06t25273Z Brassica rapa HOM05D000144 ORTHO05D007336 6.3e-06 53.5 31 67.7
Thhalv10002440m.g Eutrema salsugineum HOM05D000144 ORTHO05D007336 6.3e-06 53.5 31 67.7
SGA_v2.0_scaffold102G29927 Striga asiatica HOM05D000144 ORTHO05D007336 8.2e-06 53.1 31 71.0


User provided reference genes

Program Settings