Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042784 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 2.0e-58 228.8 106 100.0
Dinv11756 Davidia involucrata HOM05D003986 ORTHO05D004916 6.2e-28 127.5 82 73.2
Dinv14386 Davidia involucrata HOM05D003986 ORTHO05D004916 2.3e-27 125.6 82 72.0
Lj3P862T26 Lonicera japonica HOM05D003986 ORTHO05D004916 4.9e-25 117.9 83 68.7
Actinidia12415 Actinidia chinensis HOM05D003986 ORTHO05D004916 8.3e-25 117.1 81 67.9
Nn4g24477 Nelumbo nucifera HOM05D003986 ORTHO05D004916 1.4e-24 116.3 87 62.1
TAR629G0821 Trochodendron aralioides HOM05D003986 ORTHO05D004916 2.4e-24 115.5 82 64.6
ClCG01G006690 Citrullus lanatus HOM05D003986 ORTHO05D004916 3.2e-24 115.2 87 60.9
MELO3C005265.2 Cucumis melo HOM05D003986 ORTHO05D004916 4.1e-24 114.8 87 60.9
Manes.17G086100 Manihot esculenta HOM05D003986 ORTHO05D004916 7.0e-24 114.0 82 61.0
CiPaw.06G055800 Carya illinoinensis HOM05D003986 ORTHO05D004916 2.0e-23 112.5 82 63.4
CsaV3_5G027880 Cucumis sativus L. HOM05D003986 ORTHO05D004916 2.0e-23 112.5 87 58.6
Haze_08333 Corylus avellana HOM05D003986 ORTHO05D004916 2.7e-23 112.1 82 62.2
TPR.G12867 Trifolium pratense HOM05D003986 ORTHO05D004916 4.6e-23 111.3 82 61.0
Glyma.05G241400 Glycine max HOM05D003986 ORTHO05D004916 6.0e-23 110.9 82 63.4
Sed0014719 Sechium edule HOM05D003986 ORTHO05D004916 1.0e-22 110.2 82 61.0
PGR142G4089 Punica granatum HOM05D003986 ORTHO05D004916 1.7e-22 109.4 84 60.7
Ciclev10017843m.g Citrus clementina HOM05D003986 ORTHO05D004916 2.3e-22 109.0 82 61.0
DCAR_026811 Daucus carota HOM05D003986 ORTHO05D004916 3.9e-22 108.2 80 60.0
Glyma.08G048400 Glycine max HOM05D003986 ORTHO05D004916 5.0e-22 107.8 83 61.4
arahy.Tifrunner.gnm1.ann1.374THF Arachis hypogaea HOM05D003986 ORTHO05D004916 6.6e-22 107.5 80 61.2
TAR371G0322 Trochodendron aralioides HOM05D003986 ORTHO05D004916 8.6e-22 107.1 96 56.2
Potri.019G054600 Populus trichocarpa HOM05D003986 ORTHO05D004916 1.1e-21 106.7 81 61.7
PSO063G2585 Papaver somniferum HOM05D003986 ORTHO05D004916 1.9e-21 105.9 82 58.5
Sabra13G0078400 Salix brachista HOM05D003986 ORTHO05D004916 1.9e-21 105.9 81 61.7
PSO782G5475 Papaver somniferum HOM05D003986 ORTHO05D004916 2.5e-21 105.5 82 58.5
FAN17G2354 Fragaria x ananassa HOM05D003986 ORTHO05D004916 3.3e-21 105.1 82 61.0
Potri.013G085000 Populus trichocarpa HOM05D003986 ORTHO05D004916 4.3e-21 104.8 81 60.5
RcHm_v2.0_Chr4g0442311 Rosa chinensis HOM05D003986 ORTHO05D004916 4.3e-21 104.8 82 61.0
arahy.Tifrunner.gnm1.ann1.R76IPR Arachis hypogaea HOM05D003986 ORTHO05D004916 5.6e-21 104.4 80 60.0
Oeu006345.3 Olea europaea HOM05D003986 ORTHO05D004916 7.3e-21 104.0 79 60.8
Sabra19G0063600 Salix brachista HOM05D003986 ORTHO05D004916 7.3e-21 104.0 81 60.5
Psat7g004480 Pisum sativum HOM05D003986 ORTHO05D004916 1.2e-20 103.2 82 58.5
HanXRQChr12g0381871 Helianthus annuus HOM05D003986 ORTHO05D004916 1.6e-20 102.8 82 58.5
MD09G1258800 Malus domestica HOM05D003986 ORTHO05D004916 1.6e-20 102.8 88 59.1
Atru.chr11.800 Acer truncatum HOM05D003986 ORTHO05D004916 2.1e-20 102.4 83 57.8
Ca_17244_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 2.1e-20 102.4 82 57.3
Ca_30366_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 2.1e-20 102.4 82 57.3
FvH4_4g33200 Fragaria vesca HOM05D003986 ORTHO05D004916 2.1e-20 102.4 82 59.8
FAN12G0920 Fragaria x ananassa HOM05D003986 ORTHO05D004916 2.1e-20 102.4 82 59.8
FAN22G0296 Fragaria x ananassa HOM05D003986 ORTHO05D004916 2.1e-20 102.4 82 59.8
SGA_v2.0_scaffold3G01767 Striga asiatica HOM05D003986 ORTHO05D004916 2.1e-20 102.4 79 59.5
TWI74G0603 Tripterygium wilfordii HOM05D003986 ORTHO05D004916 2.8e-20 102.1 82 59.8
Lalb_Chr16g0387401 Lupinus albus HOM05D003986 ORTHO05D004916 3.6e-20 101.7 82 58.5
GSVIVG01011619001 Vitis vinifera HOM05D003986 ORTHO05D004916 3.6e-20 101.7 80 60.0
Cpa.g.c39725 Carica papaya HOM05D003986 ORTHO05D004916 4.7e-20 101.3 82 61.0
FAN07G2168 Fragaria x ananassa HOM05D003986 ORTHO05D004916 4.7e-20 101.3 82 59.8
Gohir.A03G112200 Gossypium hirsutum HOM05D003986 ORTHO05D004916 4.7e-20 101.3 82 59.8
Gohir.D02G136832 Gossypium hirsutum HOM05D003986 ORTHO05D004916 4.7e-20 101.3 82 59.8
Aqoxy3G04028 Aquilegia oxysepala HOM05D003986 ORTHO05D004916 8.1e-20 100.5 82 59.8
VMungo0251G0132 Vigna mungo HOM05D003986 ORTHO05D004916 8.1e-20 100.5 82 56.1
Thecc.02G306600 Theobroma cacao HOM05D003986 ORTHO05D004916 1.1e-19 100.1 82 56.1
CANSAT78G0669 Cannabis sativa HOM05D003986 ORTHO05D004916 1.8e-19 99.4 82 57.3
Phvul.002G324500 Phaseolus vulgaris HOM05D003986 ORTHO05D004916 1.8e-19 99.4 82 54.9
Lalb_Chr05g0222051 Lupinus albus HOM05D003986 ORTHO05D004916 3.1e-19 98.6 82 56.1
MSTRG.2114 Avicennia marina HOM05D003986 ORTHO05D004916 6.8e-19 97.4 79 57.0
Lsat_1_v5_gn_3_102381 Lactuca sativa HOM05D003986 ORTHO05D004916 6.8e-19 97.4 82 53.7
Prupe.3G150800 Prunus persica HOM05D003986 ORTHO05D004916 8.9e-19 97.1 82 58.5
Gorai.005G152800 Gossypium raimondii HOM05D003986 ORTHO05D004916 1.2e-18 96.7 82 58.5
Medtr8g106090 Medicago truncatula HOM05D003986 ORTHO05D004916 2.6e-18 95.5 83 55.4
Hund24924 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.4e-18 95.1 84 53.6
Peaxi162Scf00937g00119 Petunia axillaris HOM05D003986 ORTHO05D004916 7.5e-18 94.0 82 56.1
Carub.0001s2544 Capsella rubella HOM05D003986 ORTHO05D004916 9.8e-18 93.6 82 57.3
Lj4g0022556 Lotus japonicus HOM05D003986 ORTHO05D004916 9.8e-18 93.6 82 53.7
Thhalv10006540m.g Eutrema salsugineum HOM05D003986 ORTHO05D004916 1.3e-17 93.2 82 57.3
Solyc05g017890.4 Solanum lycopersicum HOM05D003986 ORTHO05D004916 1.3e-17 93.2 82 56.1
Sopen05g014610 Solanum pennellii HOM05D003986 ORTHO05D004916 1.3e-17 93.2 82 56.1
CDE05G3646 Ceratophyllum demersum HOM05D003986 ORTHO05D004916 1.7e-17 92.8 82 50.0
Aa31LG7G9380 Aethionema arabicum HOM05D003986 ORTHO05D004916 4.9e-17 91.3 82 56.1
CAN.G206.116 Capsicum annuum HOM05D003986 ORTHO05D004916 4.9e-17 91.3 82 54.9
CARHR026420 Cardamine hirsuta HOM05D003986 ORTHO05D004916 4.9e-17 91.3 82 56.1
Migut.E00504 Erythranthe guttata HOM05D003986 ORTHO05D004916 4.9e-17 91.3 79 51.9
AL1G40240 Arabidopsis lyrata HOM05D003986 ORTHO05D004916 6.4e-17 90.9 82 57.3
AT1G24706 Arabidopsis thaliana HOM05D003986 ORTHO05D004916 1.9e-16 89.4 82 56.1
BcaB03g12046 Brassica carinata HOM05D003986 ORTHO05D004916 1.9e-16 89.4 82 54.9
Sp1g23110 Schrenkiella parvula HOM05D003986 ORTHO05D004916 2.4e-16 89.0 82 54.9
COL.COLO4_06656 Corchorus olitorius HOM05D003986 ORTHO05D004916 3.2e-16 88.6 82 51.2
THA.LOC104807876 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 3.2e-16 88.6 82 53.7
SHI04410 Sapria himalayana HOM05D003986 ORTHO05D004916 5.4e-16 87.8 78 52.6
BolC3t19622H Brassica oleracea HOM05D003986 ORTHO05D004916 2.1e-15 85.9 82 53.7
HPP92_004743 Vanilla planifolia HOM05D003986 ORTHO05D004916 3.5e-15 85.1 79 53.2
ATR0021G052 Amborella trichopoda HOM05D003986 ORTHO05D004916 4.6e-15 84.7 71 57.7
C03p73260 Brassica napus HOM05D003986 ORTHO05D004916 4.6e-15 84.7 82 52.4
A08p26750 Brassica napus HOM05D003986 ORTHO05D004916 7.8e-15 84.0 82 52.4
Eucgr.B02697 Eucalyptus grandis HOM05D003986 ORTHO05D004916 7.8e-15 84.0 83 50.6
Ah.02g127910 Amaranthus hybridus HOM05D003986 ORTHO05D004916 2.3e-14 82.4 72 52.8
EL10Ac6g14201 Beta vulgaris HOM05D003986 ORTHO05D004916 2.3e-14 82.4 89 44.9
BraA08t34620Z Brassica rapa HOM05D003986 ORTHO05D004916 2.3e-14 82.4 82 51.2
THA.LOC104825570 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 2.3e-14 82.4 88 48.9
Nitab4.5_0004735g0040 Nicotiana tabacum HOM05D003986 ORTHO05D004916 3.0e-14 82.0 82 52.4
Nitab4.5_0000011g0130 Nicotiana tabacum HOM05D003986 ORTHO05D004916 5.1e-14 81.3 82 52.4
AUR62014146 Chenopodium quinoa HOM05D003986 ORTHO05D004916 1.1e-13 80.1 89 46.1
BcaC05g26698 Brassica carinata HOM05D003986 ORTHO05D004916 4.3e-13 78.2 73 54.8
ECA246G1343 Erigeron canadensis HOM05D003986 ORTHO05D004916 4.3e-13 78.2 74 50.0
Atru.chr2.736 Acer truncatum HOM05D003986 ORTHO05D004916 5.6e-13 77.8 83 47.0
AUR62038486 Chenopodium quinoa HOM05D003986 ORTHO05D004916 5.6e-13 77.8 89 44.9
Medtr7g117220 Medicago truncatula HOM05D003986 ORTHO05D004916 1.6e-12 76.3 76 51.3
Os01g0916800 Oryza sativa ssp. japonica HOM05D003986 ORTHO05D004916 1.6e-12 76.3 74 51.4
SMO145G0041 Selaginella moellendorffii HOM05D003986 ORTHO05D004916 8.1e-12 73.9 79 46.8
Mapoly0001s0369 Marchantia polymorpha HOM05D003986 ORTHO05D004916 1.4e-11 73.2 79 45.6
Zm00001eb156750 Zea mays HOM05D003986 ORTHO05D004916 2.2e-09 65.9 71 43.7
AagrBONN_evm.TU.Sc2ySwM_117.1912 Anthoceros agrestis HOM05D003986 ORTHO05D004916 6.4e-09 64.3 76 43.4
Pp3c11_17570 Physcomitrium patens HOM05D003986 ORTHO05D004916 4.1e-08 61.6 82 37.8
unitig_8.g4016 Utricularia gibba HOM05D003986 ORTHO05D004916 6.0e-07 57.8 47 53.2


User provided reference genes

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