Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042772 Camellia sinensis var. sinensis HOM05D004552 ORTHO05D005501 1.1e-111 406.8 220 100.0
CSS0033785 Camellia sinensis var. sinensis HOM05D004552 ORTHO05D005501 1.2e-86 323.6 228 82.0
Rhsim10G0168100 Rhododendron simsii HOM05D004552 ORTHO05D005501 1.9e-76 289.7 228 72.8
Actinidia19722 Actinidia chinensis HOM05D004552 ORTHO05D005501 2.5e-76 289.3 228 72.8
Rhsim11G0041500 Rhododendron simsii HOM05D004552 ORTHO05D005501 4.3e-76 288.5 228 72.4
Rhsim11G0041800 Rhododendron simsii HOM05D004552 ORTHO05D005501 5.7e-76 288.1 229 72.1
Dinv37242 Davidia involucrata HOM05D004552 ORTHO05D005501 1.6e-75 286.6 228 72.4
Oeu029550.1 Olea europaea HOM05D004552 ORTHO05D005501 1.8e-66 256.5 228 66.7
Oeu026072.1 Olea europaea HOM05D004552 ORTHO05D005501 5.3e-66 255.0 228 66.7
Cc00_g23990 Coffea canephora HOM05D004552 ORTHO05D005501 1.9e-63 246.5 228 64.5
Lsat_1_v5_gn_5_8941 Lactuca sativa HOM05D004552 ORTHO05D005501 4.6e-62 241.9 228 62.7
HanXRQChr05g0156781 Helianthus annuus HOM05D004552 ORTHO05D005501 1.3e-59 233.8 228 62.7
Nitab4.5_0008076g0010 Nicotiana tabacum HOM05D004552 ORTHO05D005501 2.8e-59 232.6 229 61.6
Nitab4.5_0001952g0150 Nicotiana tabacum HOM05D004552 ORTHO05D005501 1.8e-58 229.9 229 61.6
MSTRG.16520 Avicennia marina HOM05D004552 ORTHO05D005501 2.6e-57 226.1 228 60.5
ECA246G2681 Erigeron canadensis HOM05D003206 ORTHO05D005207 2.6e-57 226.1 230 63.0
Nitab4.5_0006780g0010 Nicotiana tabacum HOM05D004552 ORTHO05D005501 7.7e-57 224.6 229 60.3
Nitab4.5_0005206g0040 Nicotiana tabacum HOM05D004552 ORTHO05D005501 1.7e-56 223.4 229 60.7
CAN.G525.45 Capsicum annuum HOM05D004552 ORTHO05D005501 5.0e-56 221.9 230 59.6
AUR62025361 Chenopodium quinoa HOM05D004552 ORTHO05D005501 5.0e-56 221.9 228 59.6
Peaxi162Scf00569g00015 Petunia axillaris HOM05D004552 ORTHO05D005501 5.0e-56 221.9 229 60.7
Hund08942 Selenicereus undatus HOM05D004552 ORTHO05D005501 6.5e-56 221.5 229 57.6
TAR369G0596 Trochodendron aralioides HOM05D004552 ORTHO05D005501 1.4e-55 220.3 233 62.2
unitig_899.g15236 Utricularia gibba HOM05D004552 ORTHO05D005501 1.9e-55 219.9 228 58.3
AUR62028362 Chenopodium quinoa HOM05D004552 ORTHO05D005501 1.0e-53 214.2 228 58.3
DCAR_009290 Daucus carota HOM05D004552 ORTHO05D005501 1.0e-53 214.2 231 61.0
Migut.K00511 Erythranthe guttata HOM05D004552 ORTHO05D005501 1.0e-53 214.2 231 58.4
Haze_20666 Corylus avellana HOM05D004552 ORTHO05D005501 3.0e-53 212.6 229 61.6
Sed0010830 Sechium edule HOM05D004552 ORTHO05D005501 3.0e-53 212.6 224 58.0
Cfa017496 Carpinus fangiana HOM05D004552 ORTHO05D005501 3.9e-53 212.2 228 62.3
CiPaw.09G181100 Carya illinoinensis HOM05D004552 ORTHO05D005501 6.7e-53 211.5 227 60.4
SalBow4G1233 Salvia bowleyana HOM05D004552 ORTHO05D005501 6.7e-53 211.5 228 56.6
Sopen02g031920 Solanum pennellii HOM05D004552 ORTHO05D005501 1.1e-52 210.7 229 58.5
ClCG04G008790 Citrullus lanatus HOM05D004552 ORTHO05D005501 2.0e-52 209.9 226 57.1
Lalb_Chr05g0229841 Lupinus albus HOM05D004552 ORTHO05D005501 2.0e-52 209.9 224 60.7
TWI53G0358 Tripterygium wilfordii HOM05D004552 ORTHO05D005501 2.0e-52 209.9 235 61.3
EL10Ac7g16819 Beta vulgaris HOM05D004552 ORTHO05D005501 2.6e-52 209.5 228 57.5
Cc03_g15870 Coffea canephora HOM05D004552 ORTHO05D005501 3.3e-52 209.1 204 62.7
Ah.14g084480 Amaranthus hybridus HOM05D004552 ORTHO05D005501 4.4e-52 208.8 228 55.7
Solyc02g087180.4 Solanum lycopersicum HOM05D004552 ORTHO05D005501 9.7e-52 207.6 245 54.7
Atru.chr8.2543 Acer truncatum HOM05D004552 ORTHO05D005501 2.8e-51 206.1 252 53.2
Ciclev10011831m.g Citrus clementina HOM05D004552 ORTHO05D005501 2.8e-51 206.1 236 55.9
arahy.Tifrunner.gnm1.ann1.6MTV2V Arachis hypogaea HOM05D004552 ORTHO05D005501 1.1e-50 204.1 241 55.6
arahy.Tifrunner.gnm1.ann1.CZIV0N Arachis hypogaea HOM05D004552 ORTHO05D005501 1.1e-50 204.1 226 58.8
arahy.Tifrunner.gnm1.ann1.URH0Q0 Arachis hypogaea HOM05D004552 ORTHO05D005501 1.4e-50 203.8 239 56.5
ClCG10G016170 Citrullus lanatus HOM05D004552 ORTHO05D005501 1.4e-50 203.8 227 55.9
Solyc04g014240.1 Solanum lycopersicum HOM05D004552 ORTHO05D005501 1.4e-50 203.8 229 56.8
VMungo0251G2800 Vigna mungo HOM05D004552 ORTHO05D005501 1.4e-50 203.8 224 60.3
Sopen04g006350 Solanum pennellii HOM05D004552 ORTHO05D005501 1.8e-50 203.4 229 56.8
arahy.Tifrunner.gnm1.ann1.LN9G9C Arachis hypogaea HOM05D004552 ORTHO05D005501 5.3e-50 201.8 226 58.4
Glyma.08G287300 Glycine max HOM05D004552 ORTHO05D005501 5.3e-50 201.8 222 59.9
Thecc.05G052700 Theobroma cacao HOM05D004552 ORTHO05D005501 7.0e-50 201.4 231 55.4
PGR004G2024 Punica granatum HOM05D004552 ORTHO05D005501 1.6e-49 200.3 227 56.8
Phvul.003G261400 Phaseolus vulgaris HOM05D004552 ORTHO05D005501 2.6e-49 199.5 222 60.8
CsaV3_4G024350 Cucumis sativus L. HOM05D004552 ORTHO05D005501 4.5e-49 198.7 221 55.7
Ca_22379_v3 Cicer arietinum L. HOM05D004552 ORTHO05D005501 7.7e-49 198.0 225 58.2
Duzib106G1297 Durio zibethinus HOM05D004552 ORTHO05D005501 7.7e-49 198.0 225 56.4
Ca_19605_v3 Cicer arietinum L. HOM05D004552 ORTHO05D005501 6.5e-48 194.9 225 58.7
MELO3C014263.2 Cucumis melo HOM05D004552 ORTHO05D005501 1.5e-47 193.7 221 54.8
PSO210G6420 Papaver somniferum HOM05D004552 ORTHO05D005501 2.5e-47 193.0 238 52.5
CAN.G206.55 Capsicum annuum HOM05D004552 ORTHO05D005501 3.2e-47 192.6 228 55.3
Lj3g0026232 Lotus japonicus HOM05D004552 ORTHO05D005501 5.5e-47 191.8 224 55.8
Lj5g0019559 Lotus japonicus HOM05D004552 ORTHO05D005501 5.5e-47 191.8 224 55.8
DCAR_002493 Daucus carota HOM05D004552 ORTHO05D005501 7.2e-47 191.4 231 55.4
RcHm_v2.0_Chr1g0361081 Rosa chinensis HOM05D004552 ORTHO05D005501 1.2e-46 190.7 222 56.3
Medtr8g075790 Medicago truncatula HOM05D004552 ORTHO05D005501 2.1e-46 189.9 226 58.8
Medtr6g089780 Medicago truncatula HOM05D004552 ORTHO05D005501 3.6e-46 189.1 225 56.0
CANSAT56G3582 Cannabis sativa HOM05D004552 ORTHO05D005501 4.7e-46 188.7 235 54.9
Manes.09G079900 Manihot esculenta HOM05D004552 ORTHO05D005501 4.7e-46 188.7 224 55.4
RcHm_v2.0_Chr1g0360161 Rosa chinensis HOM05D004552 ORTHO05D005501 4.7e-46 188.7 217 57.1
Glyma.06G188800 Glycine max HOM05D004552 ORTHO05D005501 1.4e-45 187.2 222 57.2
Psat7g019080 Pisum sativum HOM05D004552 ORTHO05D005501 2.3e-45 186.4 225 58.2
PSO832G0086 Papaver somniferum HOM05D004552 ORTHO05D005501 3.0e-45 186.0 239 51.5
Prupe.2G197600 Prunus persica HOM05D004552 ORTHO05D005501 3.0e-45 186.0 212 58.0
TPR.G27980 Trifolium pratense HOM05D004552 ORTHO05D005501 3.0e-45 186.0 223 56.5
Glyma.13G067700 Glycine max HOM05D004552 ORTHO05D005501 4.0e-45 185.7 222 56.3
Lj4g0012826 Lotus japonicus HOM05D004552 ORTHO05D005501 5.2e-45 185.3 224 54.9
QL07p045485 Quercus lobata HOM05D004552 ORTHO05D005501 5.2e-45 185.3 236 54.7
Aqoxy4G02198 Aquilegia oxysepala HOM05D004552 ORTHO05D005501 2.0e-44 183.3 243 52.3
COL.COLO4_27097 Corchorus olitorius HOM05D004552 ORTHO05D005501 2.0e-44 183.3 135 74.1
THA.LOC104823245 Tarenaya hassleriana HOM05D004552 ORTHO05D005501 2.0e-44 183.3 245 49.8
FvH4_7g17650 Fragaria vesca HOM05D004552 ORTHO05D005501 5.7e-44 181.8 218 55.0
Manes.08G002200 Manihot esculenta HOM05D004552 ORTHO05D005501 5.7e-44 181.8 227 53.3
TPR.G33503 Trifolium pratense HOM05D004552 ORTHO05D005501 1.4e-42 177.2 225 53.8
Nn1g07079 Nelumbo nucifera HOM05D004552 ORTHO05D005501 1.8e-42 176.8 246 51.6
Sc07g0006230 Simmondsia chinensis HOM05D004552 ORTHO05D005501 3.1e-42 176.0 231 49.4
Aa31LG1G22060 Aethionema arabicum HOM05D004552 ORTHO05D005501 1.6e-41 173.7 251 48.6
FAN03G1811 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.2e-40 169.9 218 52.8
FAN06G0991 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.2e-40 169.9 218 51.4
AT5G02850 Arabidopsis thaliana HOM05D004552 ORTHO05D005501 5.0e-40 168.7 247 48.6
vmacro04719 Vaccinium macrocarpon HOM05D004552 ORTHO05D005501 5.0e-40 168.7 151 64.2
PGSC0003DMG400000510 Solanum tuberosum HOM05D004552 ORTHO05D005501 1.1e-39 167.5 132 68.9
Gohir.A03G063400 Gossypium hirsutum HOM05D004552 ORTHO05D005501 1.5e-39 167.2 169 56.8
FvH4_7g16920 Fragaria vesca HOM05D004552 ORTHO05D005501 1.9e-39 166.8 223 52.5
FAN06G3324 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.9e-39 166.8 223 52.5
FAN06G4506 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.9e-39 166.8 223 52.5
Potri.016G084200 Populus trichocarpa HOM05D004552 ORTHO05D005501 1.9e-39 166.8 225 50.2
arahy.Tifrunner.gnm1.ann1.52IM1F Arachis hypogaea HOM05D004552 ORTHO05D005501 4.2e-39 165.6 151 65.6
FAN03G3426 Fragaria x ananassa HOM05D004552 ORTHO05D005501 4.2e-39 165.6 228 51.8
Manes.09G080009 Manihot esculenta HOM05D004552 ORTHO05D005501 7.2e-39 164.9 131 69.5
AL6G12120 Arabidopsis lyrata HOM05D004552 ORTHO05D005501 1.2e-38 164.1 248 47.6
CDE04G3741 Ceratophyllum demersum HOM05D004552 ORTHO05D005501 1.2e-38 164.1 233 51.1
FAN01G0370 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.2e-38 164.1 231 50.2
Sp6g39730 Schrenkiella parvula HOM05D004552 ORTHO05D005501 1.6e-38 163.7 249 47.0
Lj6g0014683 Lotus japonicus HOM05D004552 ORTHO05D005501 2.7e-38 162.9 212 51.9
Gohir.D03G102900 Gossypium hirsutum HOM05D004552 ORTHO05D005501 3.6e-38 162.5 169 56.8
Gorai.003G108400 Gossypium raimondii HOM05D004552 ORTHO05D005501 3.6e-38 162.5 169 56.8
C09p73810 Brassica napus HOM05D004552 ORTHO05D005501 4.7e-38 162.2 245 46.1
BolC9t60115H Brassica oleracea HOM05D004552 ORTHO05D005501 4.7e-38 162.2 245 46.1
BcaC06g32015 Brassica carinata HOM05D004552 ORTHO05D005501 6.1e-38 161.8 244 45.9
Thhalv10013588m.g Eutrema salsugineum HOM05D004552 ORTHO05D005501 1.8e-37 160.2 254 45.3
SGA_v2.0_scaffold204G41624 Striga asiatica HOM05D004552 ORTHO05D005501 2.3e-37 159.8 211 52.6
CARHR210480 Cardamine hirsuta HOM05D004552 ORTHO05D005501 3.0e-37 159.5 249 45.0
Lj6g0002066 Lotus japonicus HOM05D004552 ORTHO05D005501 5.2e-37 158.7 210 51.9
Carub.0006s0165 Capsella rubella HOM05D004552 ORTHO05D005501 6.8e-37 158.3 252 44.0
Psat4g100360 Pisum sativum HOM05D004552 ORTHO05D005501 3.7e-35 152.5 156 62.8
A10p32880 Brassica napus HOM05D004552 ORTHO05D005501 1.8e-34 150.2 245 44.1
THA.LOC104827455 Tarenaya hassleriana HOM05D004552 ORTHO05D005501 4.1e-34 149.1 214 48.6
FAN01G0473 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.7e-33 146.4 194 51.5
PSO675G1725 Papaver somniferum HOM05D004552 ORTHO05D005501 4.5e-33 145.6 164 53.7
PGSC0003DMG400023633 Solanum tuberosum HOM05D004552 ORTHO05D005501 7.7e-33 144.8 202 48.5
SHI12593 Sapria himalayana HOM05D004552 ORTHO05D005501 5.0e-32 142.1 216 49.5
MBI18_g25517_MAGBIO Magnolia biondii HOM05D004552 ORTHO05D005501 7.2e-31 138.3 156 54.5
Eucgr.J03059 Eucalyptus grandis HOM05D004552 ORTHO05D005501 1.6e-30 137.1 256 41.0
Sabra16G0091200 Salix brachista HOM05D004552 ORTHO05D005501 1.6e-30 137.1 133 60.2
Lj6g0013650 Lotus japonicus HOM05D004552 ORTHO05D005501 7.5e-28 128.3 212 44.8
Zm00001eb103820 Zea mays HOM05D004552 ORTHO05D005501 7.5e-28 128.3 229 44.5
HPP92_012944 Vanilla planifolia HOM05D004552 ORTHO05D005501 9.8e-28 127.9 232 42.7
Os09g0540500 Oryza sativa ssp. japonica HOM05D004552 ORTHO05D005501 1.7e-27 127.1 236 43.2
Lsat_1_v5_gn_8_95200 Lactuca sativa HOM05D004552 ORTHO05D005501 5.4e-26 122.1 84 73.8
SGA_v2.0_scaffold94G28661 Striga asiatica HOM05D004552 ORTHO05D005501 1.3e-24 117.5 149 52.3
ATR0594G066 Amborella trichopoda HOM05D004552 ORTHO05D005501 6.1e-22 108.6 185 44.3
C03p01200 Brassica napus HOM05D004552 ORTHO05D005501 1.5e-20 104.0 83 67.5
BolC3t12680H Brassica oleracea HOM05D004552 ORTHO05D005501 1.5e-20 104.0 83 67.5
ATR0950G002 Amborella trichopoda HOM05D004552 ORTHO05D005501 2.6e-20 103.2 185 43.8
VMungo0647G0506 Vigna mungo HOM05D004552 ORTHO05D005501 5.7e-20 102.1 105 61.9
A03p00930 Brassica napus HOM05D004552 ORTHO05D005501 1.7e-19 100.5 119 55.5
RhsimUnG0119000 Rhododendron simsii HOM05D004552 ORTHO05D005501 1.8e-18 97.1 59 79.7
Lsat_1_v5_gn_8_95180 Lactuca sativa HOM05D004552 ORTHO05D005501 1.1e-15 87.8 69 71.0
Actinidia11233 Actinidia chinensis HOM05D004552 ORTHO05D005501 1.9e-15 87.0 74 67.6
CDE07G0444 Ceratophyllum demersum HOM05D004552 ORTHO05D005501 9.5e-15 84.7 129 45.7
BcaB01g05872 Brassica carinata HOM05D004552 ORTHO05D005501 6.2e-14 82.0 243 34.2
SEGI_01207 Sequoiadendron giganteum HOM05D004552 ORTHO05D005501 2.3e-13 80.1 205 32.7
Mapoly0007s0084 Marchantia polymorpha HOM05D004552 ORTHO05D005501 4.9e-11 72.4 106 35.8
SEGI_11500 Sequoiadendron giganteum HOM05D004552 ORTHO05D005501 1.0e-08 64.7 131 36.6
FAN14G1867 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.3e-08 63.5 65 53.8
FvH4_6g20640 Fragaria vesca HOM05D004552 ORTHO05D005501 1.9e-07 60.5 65 52.3
Pp3c14_11490 Physcomitrium patens HOM05D004552 ORTHO05D005501 4.7e-06 55.8 140 29.3


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