Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042611 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 4.7e-91 337.8 165 100.0
CSS0047504 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 2.0e-70 269.2 161 86.3
CSS0028730 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 3.3e-68 261.9 143 92.3
vmacro23398 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.5e-60 236.5 143 81.1
Actinidia11005 Actinidia chinensis HOM05D003155 ORTHO05D004342 5.6e-60 234.6 143 79.7
Thecc.01G310300 Theobroma cacao HOM05D003155 ORTHO05D004342 3.6e-59 231.9 143 79.0
COL.COLO4_23262 Corchorus olitorius HOM05D003155 ORTHO05D004342 6.2e-59 231.1 143 80.4
Duzib138G0641 Durio zibethinus HOM05D003155 ORTHO05D004342 2.3e-58 229.2 143 77.6
Oeu040091.1 Olea europaea HOM05D003155 ORTHO05D004342 2.3e-58 229.2 143 78.3
Hma1.2p1_1785F.1_g302280 Hydrangea macrophylla HOM05D003155 ORTHO05D004342 4.0e-58 228.4 143 77.6
Gohir.D11G116300 Gossypium hirsutum HOM05D003155 ORTHO05D004342 1.5e-57 226.5 143 78.3
Gorai.007G124500 Gossypium raimondii HOM05D003155 ORTHO05D004342 1.5e-57 226.5 143 78.3
GSVIVG01028086001 Vitis vinifera HOM05D003155 ORTHO05D004342 2.0e-57 226.1 143 76.9
Gohir.A11G111100 Gossypium hirsutum HOM05D003155 ORTHO05D004342 2.6e-57 225.7 143 77.6
TAR362G0957 Trochodendron aralioides HOM05D003155 ORTHO05D004342 3.4e-57 225.3 143 76.2
Peaxi162Scf00066g00524 Petunia axillaris HOM05D003155 ORTHO05D004342 1.3e-56 223.4 143 77.6
Atru.chr10.1938 Acer truncatum HOM05D003155 ORTHO05D004342 2.2e-56 222.6 143 76.9
Cpa.g.sc8.158 Carica papaya HOM05D003155 ORTHO05D004342 2.9e-56 222.2 142 78.2
MD08G1194300 Malus domestica HOM05D003155 ORTHO05D004342 2.9e-56 222.2 143 76.9
Nitab4.5_0000317g0060 Nicotiana tabacum HOM05D003155 ORTHO05D004342 3.7e-56 221.9 143 76.2
Prupe.1G528600 Prunus persica HOM05D003155 ORTHO05D004342 3.7e-56 221.9 143 76.2
Atru.chr10.1937 Acer truncatum HOM05D003155 ORTHO05D004342 6.4e-56 221.1 143 76.9
CAN.G630.85 Capsicum annuum HOM05D003155 ORTHO05D004342 6.4e-56 221.1 143 75.5
MBI19_g29997_MAGBIO Magnolia biondii HOM05D003155 ORTHO05D004342 6.4e-56 221.1 146 76.0
Nitab4.5_0002557g0030 Nicotiana tabacum HOM05D003155 ORTHO05D004342 1.1e-55 220.3 143 76.2
TAR362G0238 Trochodendron aralioides HOM05D003155 ORTHO05D004342 1.1e-55 220.3 143 74.8
MD15G1382400 Malus domestica HOM05D003155 ORTHO05D004342 2.4e-55 219.2 143 75.5
Sopen04g025920 Solanum pennellii HOM05D003155 ORTHO05D004342 4.1e-55 218.4 143 76.2
Lj3A1064T100 Lonicera japonica HOM05D003155 ORTHO05D004342 5.4e-55 218.0 143 76.2
DCAR_027274 Daucus carota HOM05D003155 ORTHO05D004342 7.0e-55 217.6 143 74.1
MD08G1194700 Malus domestica HOM05D003155 ORTHO05D004342 7.0e-55 217.6 143 75.5
CANSAT25G1273 Cannabis sativa HOM05D003155 ORTHO05D004342 9.2e-55 217.2 144 77.1
PGSC0003DMG400023032 Solanum tuberosum HOM05D003155 ORTHO05D004342 9.2e-55 217.2 143 75.5
Cc11_g04240 Coffea canephora HOM05D003155 ORTHO05D004342 2.7e-54 215.7 143 72.7
Solyc04g058090.3 Solanum lycopersicum HOM05D003155 ORTHO05D004342 2.7e-54 215.7 143 75.5
RcHm_v2.0_Chr2g0117751 Rosa chinensis HOM05D003155 ORTHO05D004342 3.5e-54 215.3 143 74.1
DCAR_024227 Daucus carota HOM05D003155 ORTHO05D004342 4.6e-54 214.9 143 74.8
Nn3g21630 Nelumbo nucifera HOM05D003155 ORTHO05D004342 4.6e-54 214.9 143 72.7
EL10Ac9g21469 Beta vulgaris HOM05D003155 ORTHO05D004342 6.0e-54 214.5 143 74.8
Cc00_g15210 Coffea canephora HOM05D003155 ORTHO05D004342 6.0e-54 214.5 143 72.7
Peaxi162Scf00591g00412 Petunia axillaris HOM05D003155 ORTHO05D004342 6.0e-54 214.5 143 74.1
Potri.002G198600 Populus trichocarpa HOM05D003155 ORTHO05D004342 7.8e-54 214.2 143 74.8
BcaC08g44717 Brassica carinata HOM05D003155 ORTHO05D004342 1.0e-53 213.8 144 73.6
A07p22400 Brassica napus HOM05D003155 ORTHO05D004342 1.3e-53 213.4 144 72.9
BcaB02g07704 Brassica carinata HOM05D003155 ORTHO05D004342 1.7e-53 213.0 144 72.2
SalBow8G2165 Salvia bowleyana HOM05D003155 ORTHO05D004342 2.3e-53 212.6 143 72.0
BraA07t29916Z Brassica rapa HOM05D003155 ORTHO05D004342 3.0e-53 212.2 144 72.9
CiPaw.13G147200 Carya illinoinensis HOM05D003155 ORTHO05D004342 3.0e-53 212.2 143 71.3
Eucgr.A02767 Eucalyptus grandis HOM05D003155 ORTHO05D004342 3.0e-53 212.2 143 74.1
FAN26G2094 Fragaria x ananassa HOM05D003155 ORTHO05D004342 3.0e-53 212.2 143 75.5
Oeu008950.2 Olea europaea HOM05D003155 ORTHO05D004342 3.9e-53 211.8 143 72.7
THA.LOC104817470 Tarenaya hassleriana HOM05D003155 ORTHO05D004342 3.9e-53 211.8 144 73.6
MSTRG.7527 Avicennia marina HOM05D003155 ORTHO05D004342 5.0e-53 211.5 143 74.1
BolC6t37446H Brassica oleracea HOM05D003155 ORTHO05D004342 5.0e-53 211.5 144 72.2
Haze_05010 Corylus avellana HOM05D003155 ORTHO05D004342 5.0e-53 211.5 143 72.0
Lj5g0009987 Lotus japonicus HOM05D003155 ORTHO05D004342 5.0e-53 211.5 140 74.3
Sabra02G0159100 Salix brachista HOM05D003155 ORTHO05D004342 5.0e-53 211.5 143 73.4
SGA_v2.0_scaffold223G42841 Striga asiatica HOM05D003155 ORTHO05D004342 5.0e-53 211.5 140 75.0
C06p22560 Brassica napus HOM05D003155 ORTHO05D004342 6.6e-53 211.1 144 72.9
ClCG01G001560 Citrullus lanatus HOM05D003155 ORTHO05D004342 6.6e-53 211.1 143 72.7
Thhalv10010436m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 6.6e-53 211.1 144 72.2
Sp5g07410 Schrenkiella parvula HOM05D003155 ORTHO05D004342 6.6e-53 211.1 144 71.5
TWI09G1633 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 6.6e-53 211.1 143 73.4
Eucgr.L02454 Eucalyptus grandis HOM05D003155 ORTHO05D004342 8.6e-53 210.7 143 73.4
Hund00057 Selenicereus undatus HOM05D003155 ORTHO05D004342 8.6e-53 210.7 143 73.4
AL5G36130 Arabidopsis lyrata HOM05D003155 ORTHO05D004342 1.1e-52 210.3 144 71.5
A09p48030 Brassica napus HOM05D003155 ORTHO05D004342 1.1e-52 210.3 144 71.5
BolC8t50632H Brassica oleracea HOM05D003155 ORTHO05D004342 1.1e-52 210.3 144 71.5
BraA09t40256Z Brassica rapa HOM05D003155 ORTHO05D004342 1.1e-52 210.3 144 71.5
FvH4_1g23040 Fragaria vesca HOM05D003155 ORTHO05D004342 1.1e-52 210.3 143 75.5
FAN19G1072 Fragaria x ananassa HOM05D003155 ORTHO05D004342 1.1e-52 210.3 143 75.5
HanXRQChr17g0540071 Helianthus annuus HOM05D003155 ORTHO05D004342 1.1e-52 210.3 143 72.7
Lj4g0014336 Lotus japonicus HOM05D003155 ORTHO05D004342 1.1e-52 210.3 140 72.9
AUR62013115 Chenopodium quinoa HOM05D003155 ORTHO05D004342 1.5e-52 209.9 143 72.0
CsaV3_5G001710 Cucumis sativus L. HOM05D003155 ORTHO05D004342 1.5e-52 209.9 143 72.0
FAN23G2124 Fragaria x ananassa HOM05D003155 ORTHO05D004342 1.5e-52 209.9 143 75.5
Potri.014G123000 Populus trichocarpa HOM05D003155 ORTHO05D004342 1.5e-52 209.9 143 73.4
Aa31sc33G80 Aethionema arabicum HOM05D003155 ORTHO05D004342 1.9e-52 209.5 144 72.9
ECA246G1648 Erigeron canadensis HOM05D003155 ORTHO05D001887 1.9e-52 209.5 140 75.7
C08p30250 Brassica napus HOM05D003155 ORTHO05D004342 2.5e-52 209.1 144 71.5
CARHR165020 Cardamine hirsuta HOM05D003155 ORTHO05D004342 2.5e-52 209.1 144 72.2
MD05G1254600 Malus domestica HOM05D003155 ORTHO05D004342 2.5e-52 209.1 143 73.4
Manes.01G225900 Manihot esculenta HOM05D003155 ORTHO05D004342 2.5e-52 209.1 143 72.0
Aqoxy5G00145 Aquilegia oxysepala HOM05D003155 ORTHO05D004342 3.3e-52 208.8 143 70.6
SalBow2G2017 Salvia bowleyana HOM05D003155 ORTHO05D004342 4.3e-52 208.4 143 70.6
Cfa005838 Carpinus fangiana HOM05D003155 ORTHO05D004342 5.6e-52 208.0 143 70.6
Carub.0005s2164 Capsella rubella HOM05D003155 ORTHO05D004342 9.5e-52 207.2 144 71.5
Hund06387 Selenicereus undatus HOM05D003155 ORTHO05D004342 1.2e-51 206.8 143 71.3
MELO3C005781.2 Cucumis melo HOM05D003155 ORTHO05D004342 1.6e-51 206.5 143 72.0
Manes.05G001800 Manihot esculenta HOM05D003155 ORTHO05D004342 1.6e-51 206.5 143 71.3
TWI53G1268 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 2.1e-51 206.1 140 74.3
TWI53G1422 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 2.1e-51 206.1 140 74.3
AUR62010120 Chenopodium quinoa HOM05D003155 ORTHO05D004342 2.8e-51 205.7 141 71.6
VMungo0251G2281 Vigna mungo HOM05D003155 ORTHO05D004342 2.8e-51 205.7 143 70.6
Sed0004341 Sechium edule HOM05D003155 ORTHO05D004342 3.6e-51 205.3 143 70.6
Cfa005833 Carpinus fangiana HOM05D003155 ORTHO05D004342 4.7e-51 204.9 143 69.9
Migut.M01874 Erythranthe guttata HOM05D003155 ORTHO05D004342 4.7e-51 204.9 143 69.9
HanXRQChr06g0174841 Helianthus annuus HOM05D003155 ORTHO05D004342 4.7e-51 204.9 143 71.3
Glyma.05G192900 Glycine max HOM05D003155 ORTHO05D004342 6.2e-51 204.5 143 69.9
FAN28G3015 Fragaria x ananassa HOM05D003155 ORTHO05D004342 1.8e-50 203.0 143 74.1
AT3G55010 Arabidopsis thaliana HOM05D003155 ORTHO05D004342 2.3e-50 202.6 144 69.4
MD08G1193800 Malus domestica HOM05D003155 ORTHO05D004342 2.3e-50 202.6 142 73.2
MD08G1195100 Malus domestica HOM05D003155 ORTHO05D004342 2.3e-50 202.6 142 73.2
PSO541G5346 Papaver somniferum HOM05D003155 ORTHO05D004342 3.1e-50 202.2 144 71.5
Ah.01g001460 Amaranthus hybridus HOM05D003155 ORTHO05D003938 4.0e-50 201.8 143 68.5
CDE11G0169 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 4.0e-50 201.8 144 71.5
Medtr8g093860 Medicago truncatula HOM05D003155 ORTHO05D004342 5.2e-50 201.4 143 69.2
Phvul.002G273500 Phaseolus vulgaris HOM05D003155 ORTHO05D004342 6.8e-50 201.1 143 67.8
arahy.Tifrunner.gnm1.ann1.PM89VL Arachis hypogaea HOM05D003155 ORTHO05D004342 8.9e-50 200.7 143 69.2
Glyma.08G001000 Glycine max HOM05D003155 ORTHO05D004342 8.9e-50 200.7 143 69.2
Ca_22781_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 1.2e-49 200.3 146 71.2
Lalb_Chr08g0238231 Lupinus albus HOM05D003155 ORTHO05D004342 1.2e-49 200.3 143 68.5
PGR119G0649 Punica granatum HOM05D003155 ORTHO05D004342 1.2e-49 200.3 143 72.0
TPR.G37349 Trifolium pratense HOM05D003155 ORTHO05D004342 1.2e-49 200.3 143 68.5
arahy.Tifrunner.gnm1.ann1.DJPQ45 Arachis hypogaea HOM05D003155 ORTHO05D004342 1.5e-49 199.9 143 69.2
ECA248G1812 Erigeron canadensis HOM05D003155 ORTHO05D004342 1.5e-49 199.9 139 72.7
Ca_14922_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 2.0e-49 199.5 146 70.5
PGSC0003DMG400027622 Solanum tuberosum HOM05D003155 ORTHO05D004342 2.0e-49 199.5 146 70.5
Lsat_1_v5_gn_3_29341 Lactuca sativa HOM05D003155 ORTHO05D004342 2.6e-49 199.1 147 70.7
Psat7g045040 Pisum sativum HOM05D003155 ORTHO05D004342 4.4e-49 198.4 143 69.2
PGR066G0004 Punica granatum HOM05D003155 ORTHO05D004342 5.8e-49 198.0 143 71.3
PGR142G1043 Punica granatum HOM05D003155 ORTHO05D004342 5.8e-49 198.0 143 71.3
Os03g0831500 Oryza sativa ssp. japonica HOM05D003155 ORTHO05D004342 7.5e-49 197.6 144 69.4
PSO675G7447 Papaver somniferum HOM05D003155 ORTHO05D004342 2.2e-48 196.1 144 69.4
QL05p045478 Quercus lobata HOM05D003155 ORTHO05D004342 3.7e-48 195.3 135 71.9
SGA_v2.0_scaffold1G00231 Striga asiatica HOM05D003155 ORTHO05D004342 6.4e-48 194.5 139 69.1
SEGI_27039 Sequoiadendron giganteum HOM05D003155 ORTHO05D004342 1.9e-47 193.0 151 67.5
Zm00001eb284260 Zea mays HOM05D003155 ORTHO05D004342 2.4e-47 192.6 146 66.4
Thhalv10018710m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 4.1e-47 191.8 144 64.6
Lalb_Chr11g0068521 Lupinus albus HOM05D003155 ORTHO05D004342 7.1e-47 191.0 141 66.7
ATR0693G061 Amborella trichopoda HOM05D003155 ORTHO05D004342 1.6e-46 189.9 146 67.8
MD15G1382500 Malus domestica HOM05D003155 ORTHO05D004342 2.1e-46 189.5 140 68.6
Sc08g0003390 Simmondsia chinensis HOM05D003155 ORTHO05D004342 2.7e-46 189.1 143 66.4
Sp5g14230 Schrenkiella parvula HOM05D003155 ORTHO05D004342 1.3e-45 186.8 137 67.9
RcHm_v2.0_Chr2g0117621 Rosa chinensis HOM05D003155 ORTHO05D004342 2.3e-45 186.0 141 66.0
unitig_37.g12904 Utricularia gibba HOM05D003155 ORTHO05D004342 2.3e-45 186.0 143 65.0
HPP92_001922 Vanilla planifolia HOM05D003155 ORTHO05D004342 3.9e-45 185.3 146 65.1
Pp3c6_25750 Physcomitrium patens HOM05D003155 ORTHO05D004342 1.5e-44 183.3 144 56.9
CARHR047360 Cardamine hirsuta HOM05D003155 ORTHO05D004342 4.3e-44 181.8 141 63.1
CDE05G2880 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 7.3e-44 181.0 121 73.6
CDE05G1659 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 2.1e-43 179.5 157 63.7
RcHm_v2.0_Chr7g0218451 Rosa chinensis HOM05D003155 ORTHO05D004342 2.8e-43 179.1 106 78.3
Pp3c5_3030 Physcomitrium patens HOM05D003155 ORTHO05D004342 3.6e-43 178.7 143 56.6
SMO116G0007 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 5.8e-41 171.4 149 55.7
MD08G1195000 Malus domestica HOM05D003155 ORTHO05D004342 1.7e-40 169.9 111 73.0
Mapoly0003s0273 Marchantia polymorpha HOM05D003155 ORTHO05D004342 2.4e-39 166.0 144 59.7
AagrBONN_evm.TU.Sc2ySwM_368.880 Anthoceros agrestis HOM05D003155 ORTHO05D004342 3.2e-39 165.6 144 54.2
Medtr5g093890 Medicago truncatula HOM05D003155 ORTHO05D004342 6.0e-38 161.4 106 71.7
SMO232G0073 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 5.6e-36 154.8 141 55.3
vmacro12338 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.4e-34 150.2 90 80.0
vmacro21347 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.7e-32 143.3 105 65.7
CBR_g16871 Chara braunii HOM05D003155 ORTHO05D004342 2.2e-32 142.9 158 50.6
Dinv33099 Davidia involucrata HOM05D003155 ORTHO05D004342 2.9e-32 142.5 89 78.7
Lj6C819T16 Lonicera japonica HOM05D003155 ORTHO05D004342 1.9e-31 139.8 105 67.6
Lsat_1_v5_gn_5_90561 Lactuca sativa HOM05D003155 ORTHO05D004342 2.4e-31 139.4 126 59.5
Lsat_1_v5_gn_9_22280 Lactuca sativa HOM05D003155 ORTHO05D004342 9.3e-31 137.5 126 57.9
Lsat_1_v5_gn_0_24560 Lactuca sativa HOM05D003155 ORTHO05D004342 2.7e-30 136.0 124 59.7
Lsat_1_v5_gn_3_120781 Lactuca sativa HOM05D003155 ORTHO05D004342 2.7e-30 136.0 124 59.7
Lsat_1_v5_gn_4_175621 Lactuca sativa HOM05D003155 ORTHO05D004342 2.7e-30 136.0 124 59.7
Lsat_1_v5_gn_6_3740 Lactuca sativa HOM05D003155 ORTHO05D004342 2.7e-30 136.0 124 59.7
CARHR165030 Cardamine hirsuta HOM05D003155 ORTHO05D004342 3.0e-29 132.5 107 63.6
RcHm_v2.0_Chr5g0059271 Rosa chinensis HOM05D003155 ORTHO05D004342 5.6e-28 128.3 123 56.1
PRCOL_00001570 Prasinoderma coloniale HOM05D003155 ORTHO05D004342 1.6e-27 126.7 144 45.1
Actinidia11100 Actinidia chinensis HOM05D003155 ORTHO05D002245 1.8e-26 123.2 69 84.1
AagrBONN_evm.TU.Sc2ySwM_368.885 Anthoceros agrestis HOM05D003155 ORTHO05D004342 9.0e-26 120.9 105 52.4
Cre07.g318750 Chlamydomonas reinhardtii HOM05D003155 ORTHO05D004342 9.0e-26 120.9 144 42.4
Dinv10071 Davidia involucrata HOM05D003155 ORTHO05D004342 1.2e-25 120.6 70 80.0
Sabra14G0091400 Salix brachista HOM05D003155 ORTHO05D004342 9.9e-25 117.5 83 66.3
Cfa005835 Carpinus fangiana HOM05D003155 ORTHO05D004342 2.2e-24 116.3 146 47.3
RcHm_v2.0_Chr5g0056581 Rosa chinensis HOM05D003155 ORTHO05D004342 3.2e-23 112.5 85 67.1
Lsat_1_v5_gn_8_28960 Lactuca sativa HOM05D003155 ORTHO05D004342 7.9e-22 107.8 99 59.6
Cfa023437 Carpinus fangiana HOM05D000974 ORTHO05D006000 1.0e-21 107.5 150 39.3
TPR.G31811 Trifolium pratense HOM05D003155 ORTHO05D004342 1.3e-19 100.5 81 60.5
Haze_26160 Corylus avellana HOM05D003155 ORTHO05D004342 3.1e-18 95.9 119 41.2
vmacro12337 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.3e-16 90.5 86 58.1
SMO232G0017 Selaginella moellendorffii HOM05D003155 ORTHO05D379129 4.9e-16 88.6 133 36.1
BcaNung04653 Brassica carinata HOM05D003155 ORTHO05D004342 1.4e-15 87.0 63 69.8
COL.COLO4_33959 Corchorus olitorius HOM05D003155 ORTHO05D012487 5.5e-15 85.1 61 68.9
MD08G1194800 Malus domestica HOM05D003155 ORTHO05D004342 7.6e-09 64.7 59 57.6
AagrBONN_evm.TU.Sc2ySwM_344.1369 Anthoceros agrestis HOM05D003155 ORTHO05D004342 4.2e-07 58.9 58 46.6
GSVIVG01011409001 Vitis vinifera HOM05D003155 ORTHO05D004342 9.3e-07 57.8 46 67.4
Lsat_1_v5_gn_6_116961 Lactuca sativa HOM05D003155 ORTHO05D229620 1.6e-06 57.0 50 60.0
CBR_g46846 Chara braunii HOM05D003155 ORTHO05D131586 4.6e-06 55.5 62 45.2


User provided reference genes

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