Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042394 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 3.4e-101 371.7 190 100.0
CSS0044117 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 9.1e-99 363.6 190 98.9
CSS0036613 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 9.2e-91 337.0 190 93.7
CSS0033742 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 5.2e-86 321.2 188 89.9
CSS0006872 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.0e-57 227.3 183 72.1
PGSC0003DMG400014494 Solanum tuberosum HOM05D003889 ORTHO05D004407 1.1e-54 217.2 180 69.4
Dinv30246 Davidia involucrata HOM05D003889 ORTHO05D004407 3.1e-54 215.7 183 68.3
Cc08_g08480 Coffea canephora HOM05D003889 ORTHO05D004407 4.0e-54 215.3 181 69.1
Migut.A00236 Erythranthe guttata HOM05D003889 ORTHO05D004407 4.0e-54 215.3 183 68.3
Actinidia13307 Actinidia chinensis HOM05D003889 ORTHO05D004407 6.9e-54 214.5 183 67.8
Lj7C708G10 Lonicera japonica HOM05D003889 ORTHO05D004407 9.0e-54 214.2 183 68.3
SGA_v2.0_scaffold243G44298 Striga asiatica HOM05D003889 ORTHO05D004407 9.0e-54 214.2 183 67.8
MBI04_g19381_MAGBIO Magnolia biondii HOM05D003889 ORTHO05D004407 1.5e-53 213.4 183 66.7
Sopen08g021990 Solanum pennellii HOM05D003889 ORTHO05D004407 2.0e-53 213.0 183 67.2
Aqoxy7G01675 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 2.6e-53 212.6 183 67.2
Ca_12818_v3 Cicer arietinum L. HOM05D003889 ORTHO05D004407 3.4e-53 212.2 183 68.3
Eucgr.C02886 Eucalyptus grandis HOM05D003889 ORTHO05D004407 4.4e-53 211.8 183 66.1
TAR636G2332 Trochodendron aralioides HOM05D003889 ORTHO05D004407 5.8e-53 211.5 183 68.3
Haze_21830 Corylus avellana HOM05D003889 ORTHO05D004407 9.9e-53 210.7 183 66.7
Lalb_Chr24g0402621 Lupinus albus HOM05D003889 ORTHO05D004407 9.9e-53 210.7 182 67.6
Sed0021057 Sechium edule HOM05D003889 ORTHO05D004407 9.9e-53 210.7 183 66.7
MELO3C011159.2 Cucumis melo HOM05D003889 ORTHO05D004407 1.3e-52 210.3 183 66.1
TPR.G12075 Trifolium pratense HOM05D003889 ORTHO05D004407 1.3e-52 210.3 183 67.2
CAN.G886.4 Capsicum annuum HOM05D003889 ORTHO05D004407 1.7e-52 209.9 183 66.1
Gohir.D13G192600 Gossypium hirsutum HOM05D003889 ORTHO05D004407 1.7e-52 209.9 183 66.1
Gorai.013G218600 Gossypium raimondii HOM05D003889 ORTHO05D004407 1.7e-52 209.9 183 66.1
Lj1g0022555 Lotus japonicus HOM05D003889 ORTHO05D004407 1.7e-52 209.9 183 67.2
Nn8g39185 Nelumbo nucifera HOM05D003889 ORTHO05D004407 1.7e-52 209.9 183 66.1
Oeu018088.1 Olea europaea HOM05D003889 ORTHO05D004407 1.7e-52 209.9 183 67.8
Oeu031571.1 Olea europaea HOM05D003889 ORTHO05D004407 1.7e-52 209.9 183 67.8
Solyc08g068110.1 Solanum lycopersicum HOM05D003889 ORTHO05D004407 2.9e-52 209.1 182 66.5
PSO198G0085 Papaver somniferum HOM05D003889 ORTHO05D004407 3.8e-52 208.8 183 66.1
PSO782G2669 Papaver somniferum HOM05D003889 ORTHO05D004407 3.8e-52 208.8 183 66.1
Peaxi162Scf00105g00416 Petunia axillaris HOM05D003889 ORTHO05D004407 4.9e-52 208.4 180 66.7
Psat6g033880 Pisum sativum HOM05D003889 ORTHO05D004407 4.9e-52 208.4 183 66.7
arahy.Tifrunner.gnm1.ann1.NKLE2F Arachis hypogaea HOM05D003889 ORTHO05D004407 6.4e-52 208.0 183 66.7
Nitab4.5_0000250g0220 Nicotiana tabacum HOM05D003889 ORTHO05D004407 6.4e-52 208.0 183 66.1
VMungo0647G0349 Vigna mungo HOM05D003889 ORTHO05D004407 6.4e-52 208.0 180 67.2
Atru.chr7.2295 Acer truncatum HOM05D003889 ORTHO05D004407 8.4e-52 207.6 183 66.7
CsaV3_2G031090 Cucumis sativus L. HOM05D003889 ORTHO05D004407 8.4e-52 207.6 183 66.1
Glyma.14G140800 Glycine max HOM05D003889 ORTHO05D004407 8.4e-52 207.6 183 66.1
QL12p026194 Quercus lobata HOM05D003889 ORTHO05D004407 8.4e-52 207.6 183 65.6
SalBow4G0524 Salvia bowleyana HOM05D003889 ORTHO05D004407 8.4e-52 207.6 183 65.0
Manes.03G066340 Manihot esculenta HOM05D003889 ORTHO05D004407 1.1e-51 207.2 183 67.2
DCAR_000737 Daucus carota HOM05D003889 ORTHO05D004407 1.4e-51 206.8 185 66.5
Rhsim02G0183600 Rhododendron simsii HOM05D003889 ORTHO05D004407 1.4e-51 206.8 180 67.2
Duzib150G0348 Durio zibethinus HOM05D003889 ORTHO05D004407 1.9e-51 206.5 180 66.1
Potri.018G036600 Populus trichocarpa HOM05D003889 ORTHO05D004407 1.9e-51 206.5 183 67.2
RcHm_v2.0_Chr6g0305641 Rosa chinensis HOM05D003889 ORTHO05D004407 1.9e-51 206.5 183 63.9
arahy.Tifrunner.gnm1.ann1.D2VLN9 Arachis hypogaea HOM05D003889 ORTHO05D004407 2.4e-51 206.1 183 66.1
HanXRQChr14g0435171 Helianthus annuus HOM05D003889 ORTHO05D004407 2.4e-51 206.1 183 65.6
ClCG08G012400 Citrullus lanatus HOM05D003889 ORTHO05D004407 4.2e-51 205.3 145 76.6
ECA233G2562 Erigeron canadensis HOM05D003889 ORTHO05D004407 4.2e-51 205.3 183 65.6
Ciclev10007228m.g Citrus clementina HOM05D003889 ORTHO05D004407 5.4e-51 204.9 183 65.6
FvH4_2g36240 Fragaria vesca HOM05D003889 ORTHO05D004407 5.4e-51 204.9 183 64.5
FAN15G2018 Fragaria x ananassa HOM05D003889 ORTHO05D004407 5.4e-51 204.9 183 64.5
FAN27G2633 Fragaria x ananassa HOM05D003889 ORTHO05D004407 5.4e-51 204.9 183 64.5
Lsat_1_v5_gn_6_11181 Lactuca sativa HOM05D003889 ORTHO05D004407 5.4e-51 204.9 183 65.0
Medtr1g008600 Medicago truncatula HOM05D003889 ORTHO05D004407 5.4e-51 204.9 183 65.6
Nitab4.5_0008974g0010 Nicotiana tabacum HOM05D003889 ORTHO05D004407 5.4e-51 204.9 181 65.2
PGR044G0516 Punica granatum HOM05D003889 ORTHO05D004407 5.4e-51 204.9 183 65.6
Phvul.008G158500 Phaseolus vulgaris HOM05D003889 ORTHO05D004407 7.1e-51 204.5 183 65.6
Prupe.1G453900 Prunus persica HOM05D003889 ORTHO05D004407 1.2e-50 203.8 183 65.6
Os12g0291000 Oryza sativa ssp. japonica HOM05D003889 ORTHO05D004407 1.6e-50 203.4 193 61.7
AT4G32700 Arabidopsis thaliana HOM05D003889 ORTHO05D004407 2.1e-50 203.0 183 65.0
Sp7g30460 Schrenkiella parvula HOM05D003889 ORTHO05D004407 2.7e-50 202.6 183 65.0
Carub.0007s0783 Capsella rubella HOM05D003889 ORTHO05D004407 7.9e-50 201.1 183 64.5
CiPaw.07G208100 Carya illinoinensis HOM05D003889 ORTHO05D004407 1.0e-49 200.7 183 63.9
Thhalv10024191m.g Eutrema salsugineum HOM05D003889 ORTHO05D004407 1.0e-49 200.7 183 64.5
CARHR240680 Cardamine hirsuta HOM05D003889 ORTHO05D004407 1.3e-49 200.3 183 64.5
AL7G19040 Arabidopsis lyrata HOM05D003889 ORTHO05D004407 1.7e-49 199.9 183 64.5
Thecc.09G038600 Theobroma cacao HOM05D003889 ORTHO05D004407 1.7e-49 199.9 183 65.6
Aa31LG2G16920 Aethionema arabicum HOM05D003889 ORTHO05D004407 2.3e-49 199.5 183 65.0
Ah.10g035410 Amaranthus hybridus HOM05D003889 ORTHO05D004407 3.0e-49 199.1 183 64.5
BcaB03g12757 Brassica carinata HOM05D003889 ORTHO05D004407 3.0e-49 199.1 183 63.9
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 3.0e-49 199.1 183 63.9
Sc23g0005860 Simmondsia chinensis HOM05D003889 ORTHO05D004407 3.0e-49 199.1 183 65.0
THA.LOC104818599 Tarenaya hassleriana HOM05D003889 ORTHO05D004407 3.0e-49 199.1 183 65.0
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 3.9e-49 198.7 183 63.9
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 3.9e-49 198.7 183 63.9
AUR62009357 Chenopodium quinoa HOM05D003889 ORTHO05D004407 3.9e-49 198.7 183 63.9
EL10Ac2g04091 Beta vulgaris HOM05D003889 ORTHO05D004407 6.6e-49 198.0 186 62.9
Cpa.g.sc78.93 Carica papaya HOM05D003889 ORTHO05D004407 6.6e-49 198.0 181 63.0
TWI34G0995 Tripterygium wilfordii HOM05D003889 ORTHO05D004407 6.6e-49 198.0 183 63.4
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 8.7e-49 197.6 183 63.4
FAN20G0810 Fragaria x ananassa HOM05D003889 ORTHO05D004407 8.7e-49 197.6 139 76.3
Gohir.A13G185900 Gossypium hirsutum HOM05D003889 ORTHO05D004407 8.7e-49 197.6 183 63.9
AUR62023039 Chenopodium quinoa HOM05D003889 ORTHO05D004407 1.9e-48 196.4 183 63.4
MD08G1120000 Malus domestica HOM05D003889 ORTHO05D004407 2.5e-48 196.1 183 62.8
COL.COLO4_18706 Corchorus olitorius HOM05D003889 ORTHO05D004407 3.3e-48 195.7 183 63.9
HPP92_002909 Vanilla planifolia HOM05D003889 ORTHO05D004407 4.3e-48 195.3 183 62.3
ATR0916G007 Amborella trichopoda HOM05D003889 ORTHO05D004407 1.6e-47 193.4 180 61.1
C03p87160 Brassica napus HOM05D003889 ORTHO05D004407 1.6e-47 193.4 183 62.3
BolC3t21018H Brassica oleracea HOM05D003889 ORTHO05D004407 1.6e-47 193.4 180 62.8
BraA08t33755Z Brassica rapa HOM05D003889 ORTHO05D004407 1.6e-47 193.4 180 62.8
Hund03446 Selenicereus undatus HOM05D003889 ORTHO05D004407 1.6e-47 193.4 183 63.4
A08p18050 Brassica napus HOM05D003889 ORTHO05D004407 2.8e-47 192.6 183 62.3
Zm00001eb409880 Zea mays HOM05D003889 ORTHO05D004407 8.1e-47 191.0 183 60.7
SHI18632 Sapria himalayana HOM05D003889 ORTHO05D004407 7.6e-45 184.5 182 59.9
unitig_37.g12219 Utricularia gibba HOM05D003889 ORTHO05D004407 6.4e-44 181.4 183 58.5
GSVIVG01035684001 Vitis vinifera HOM05D003889 ORTHO05D004407 5.1e-41 171.8 157 65.0
SEGI_30069 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 1.8e-38 163.3 160 58.8
Pp3c1_24760 Physcomitrium patens HOM05D003889 ORTHO05D004407 1.2e-37 160.6 182 51.1
AagrBONN_evm.TU.Sc2ySwM_117.2429 Anthoceros agrestis HOM05D003889 ORTHO05D004407 2.0e-37 159.8 183 54.6
Mapoly0097s0045 Marchantia polymorpha HOM05D003889 ORTHO05D004407 1.9e-35 153.3 186 48.9
Pp3c5_12930 Physcomitrium patens HOM05D003889 ORTHO05D004407 8.7e-33 144.4 186 47.8
CBR_g998 Chara braunii HOM05D003889 ORTHO05D004407 2.2e-23 113.2 110 53.6
CSS0033543 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 3.1e-22 109.4 92 70.7
Lsat_1_v5_gn_6_24580 Lactuca sativa HOM05D003889 ORTHO05D004407 5.3e-22 108.6 148 47.3
Lsat_1_v5_gn_4_66900 Lactuca sativa HOM05D003889 ORTHO05D004407 4.5e-21 105.5 103 60.2
Lsat_1_v5_gn_8_47340 Lactuca sativa HOM05D003889 ORTHO05D002785 1.3e-20 104.0 103 59.2
Cre16.g664301 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 2.2e-20 103.2 195 37.4
Aqoxy520s001 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 5.1e-17 92.0 70 72.9
Actinidia24572 Actinidia chinensis HOM05D003889 ORTHO05D004407 2.5e-16 89.7 67 73.1
Cre08.g384390 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 2.5e-16 89.7 143 44.1
SEGI_15374 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 5.3e-14 82.0 71 63.4
MCO01G257 Micromonas commoda HOM05D003889 ORTHO05D004407 2.6e-13 79.7 177 35.0
Haze_13402 Corylus avellana HOM05D003889 ORTHO05D004407 1.3e-12 77.4 97 51.5
PRCOL_00006968 Prasinoderma coloniale HOM05D003889 ORTHO05D004407 1.3e-12 77.4 163 34.4
Lsat_1_v5_gn_6_75601 Lactuca sativa HOM05D003889 ORTHO05D004407 1.0e-09 67.8 54 64.8
Lsat_1_v5_gn_3_5760 Lactuca sativa HOM05D003889 ORTHO05D004407 8.8e-09 64.7 111 42.3


User provided reference genes

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