Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042301 Camellia sinensis var. sinensis HOM05D004091 ORTHO05D004581 1.2e-74 283.1 142 100.0
CSS0026720 Camellia sinensis var. sinensis HOM05D004091 ORTHO05D004581 2.6e-74 282.0 142 99.3
CSS0015702 Camellia sinensis var. sinensis HOM05D004091 ORTHO05D004581 2.2e-65 252.3 136 91.9
Actinidia24146 Actinidia chinensis HOM05D004091 ORTHO05D004581 5.9e-50 201.1 136 75.0
Dinv16219 Davidia involucrata HOM05D004091 ORTHO05D004581 4.6e-47 191.4 138 68.1
Rhsim13G0100400 Rhododendron simsii HOM05D004091 ORTHO05D004581 3.7e-44 181.8 138 66.7
GSVIVG01031466001 Vitis vinifera HOM05D004091 ORTHO05D004581 1.4e-43 179.9 136 65.4
vmacro03254 Vaccinium macrocarpon HOM05D004091 ORTHO05D004581 1.7e-41 172.9 136 65.4
Potri.009G005600 Populus trichocarpa HOM05D004091 ORTHO05D004581 6.5e-41 171.0 134 65.7
Duzib170G1119 Durio zibethinus HOM05D004091 ORTHO05D004581 8.5e-41 170.6 135 61.5
Gohir.D05G088200 Gossypium hirsutum HOM05D004091 ORTHO05D004581 8.5e-41 170.6 135 61.5
Gorai.009G090400 Gossypium raimondii HOM05D004091 ORTHO05D004581 1.1e-40 170.2 136 62.5
TAR369G1011 Trochodendron aralioides HOM05D004091 ORTHO05D004581 1.9e-40 169.5 135 62.2
Thecc.09G298700 Theobroma cacao HOM05D004091 ORTHO05D004581 4.2e-40 168.3 135 62.2
TAR623G0825 Trochodendron aralioides HOM05D004091 ORTHO05D004581 1.2e-39 166.8 137 62.8
CiPaw.11G059100 Carya illinoinensis HOM05D004091 ORTHO05D004581 2.7e-39 165.6 136 61.8
Gohir.A05G087000 Gossypium hirsutum HOM05D004091 ORTHO05D004581 2.7e-39 165.6 136 60.3
COL.COLO4_19192 Corchorus olitorius HOM05D004091 ORTHO05D004581 6.1e-39 164.5 135 60.0
Glyma.13G322100 Glycine max HOM05D004091 ORTHO05D004581 1.0e-38 163.7 136 59.6
TPR.G36836 Trifolium pratense HOM05D004091 ORTHO05D004581 1.4e-38 163.3 133 59.4
Lj3g0003103 Lotus japonicus HOM05D004091 ORTHO05D004581 1.8e-38 162.9 135 60.0
TWI79G0199 Tripterygium wilfordii HOM05D004091 ORTHO05D004581 1.8e-38 162.9 135 58.5
Cfa001699 Carpinus fangiana HOM05D004091 ORTHO05D004581 3.0e-38 162.2 136 61.8
Phvul.005G130500 Phaseolus vulgaris HOM05D004091 ORTHO05D004581 3.9e-38 161.8 134 57.5
TWI79G0102 Tripterygium wilfordii HOM05D004091 ORTHO05D004581 6.7e-38 161.0 135 57.8
VMungo1080G0687 Vigna mungo HOM05D004091 ORTHO05D004581 6.7e-38 161.0 134 56.7
Glyma.12G178500 Glycine max HOM05D004091 ORTHO05D004581 8.8e-38 160.6 135 58.5
TWI75G1803 Tripterygium wilfordii HOM05D004091 ORTHO05D004581 8.8e-38 160.6 135 58.5
Medtr4g057270 Medicago truncatula HOM05D004091 ORTHO05D004581 1.1e-37 160.2 134 56.7
TPR.G21029 Trifolium pratense HOM05D004091 ORTHO05D004581 1.1e-37 160.2 134 59.0
Medtr2g084280 Medicago truncatula HOM05D004091 ORTHO05D004581 3.3e-37 158.7 134 58.2
Haze_16835 Corylus avellana HOM05D004091 ORTHO05D004581 1.3e-36 156.8 136 58.8
Oeu007735.1 Olea europaea HOM05D004091 ORTHO05D004581 1.7e-36 156.4 135 59.3
Ca_01707_v3 Cicer arietinum L. HOM05D004091 ORTHO05D004581 2.2e-36 156.0 135 57.0
Manes.11G152300 Manihot esculenta HOM05D004091 ORTHO05D004581 3.7e-36 155.2 134 59.7
Sabra09G0002900 Salix brachista HOM05D004091 ORTHO05D004581 8.2e-36 154.1 133 61.7
Ciclev10029784m.g Citrus clementina HOM05D004091 ORTHO05D004581 1.4e-35 153.3 134 56.0
Eucgr.B03931 Eucalyptus grandis HOM05D004091 ORTHO05D004581 4.1e-35 151.8 134 58.2
QL01p015070 Quercus lobata HOM05D004091 ORTHO05D004581 4.1e-35 151.8 136 56.6
Atru.chr3.3518 Acer truncatum HOM05D004091 ORTHO05D004581 7.0e-35 151.0 137 57.7
PGR102G0619 Punica granatum HOM05D004091 ORTHO05D004581 7.0e-35 151.0 138 59.4
THA.LOC104826386 Tarenaya hassleriana HOM05D004091 ORTHO05D004581 2.0e-34 149.4 135 56.3
arahy.Tifrunner.gnm1.ann1.H3UHY6 Arachis hypogaea HOM05D004091 ORTHO05D004581 5.9e-34 147.9 135 52.6
Gohir.A09G088800 Gossypium hirsutum HOM05D004091 ORTHO05D004581 5.9e-34 147.9 135 54.1
Lalb_Chr22g0350411 Lupinus albus HOM05D004091 ORTHO05D004581 1.0e-33 147.1 135 54.8
arahy.Tifrunner.gnm1.ann1.MIP29L Arachis hypogaea HOM05D004091 ORTHO05D004581 1.3e-33 146.7 135 52.6
AUR62014973 Chenopodium quinoa HOM05D004091 ORTHO05D004581 1.7e-33 146.4 136 52.2
Ciclev10030052m.g Citrus clementina HOM05D004091 ORTHO05D004581 1.7e-33 146.4 135 57.0
Nn2g13852 Nelumbo nucifera HOM05D004091 ORTHO05D004581 1.7e-33 146.4 137 56.9
Gorai.006G105000 Gossypium raimondii HOM05D004091 ORTHO05D004581 2.9e-33 145.6 134 54.5
Lj3g0002714 Lotus japonicus HOM05D004091 ORTHO05D004581 3.8e-33 145.2 134 52.2
MELO3C026952.2 Cucumis melo HOM05D004091 ORTHO05D004581 6.5e-33 144.4 136 57.4
CANSAT54G0269 Cannabis sativa HOM05D004091 ORTHO05D004581 8.5e-33 144.1 144 54.9
Sp4g10970 Schrenkiella parvula HOM05D004091 ORTHO05D004581 8.5e-33 144.1 135 54.8
Carub.0004s0898 Capsella rubella HOM05D004091 ORTHO05D004581 1.1e-32 143.7 135 54.1
Lalb_Chr24g0394931 Lupinus albus HOM05D004091 ORTHO05D004581 1.5e-32 143.3 135 52.6
Peaxi162Scf00530g00031 Petunia axillaris HOM05D004091 ORTHO05D004581 1.9e-32 142.9 135 51.9
EL10Ac9g22622 Beta vulgaris HOM05D004091 ORTHO05D004581 2.5e-32 142.5 139 51.8
CARHR121010 Cardamine hirsuta HOM05D004091 ORTHO05D004581 2.5e-32 142.5 135 53.3
FAN25G1486 Fragaria x ananassa HOM05D004091 ORTHO05D004581 2.5e-32 142.5 136 58.8
Thhalv10016957m.g Eutrema salsugineum HOM05D004091 ORTHO05D004581 3.2e-32 142.1 135 54.1
THA.LOC104800575 Tarenaya hassleriana HOM05D004091 ORTHO05D004581 3.2e-32 142.1 135 54.1
Aqoxy2G01663 Aquilegia oxysepala HOM05D004091 ORTHO05D004581 4.2e-32 141.7 139 51.8
Glyma.11G192800 Glycine max HOM05D004091 ORTHO05D004581 4.2e-32 141.7 135 52.6
CsaV3_6G014370 Cucumis sativus L. HOM05D004091 ORTHO05D004581 5.5e-32 141.4 136 55.9
Nn6g35240 Nelumbo nucifera HOM05D004091 ORTHO05D004581 5.5e-32 141.4 140 55.7
Aa31LG5G7980 Aethionema arabicum HOM05D004091 ORTHO05D004581 9.4e-32 140.6 139 51.8
AL4G21990 Arabidopsis lyrata HOM05D004091 ORTHO05D004581 9.4e-32 140.6 135 53.3
BolC4t23837H Brassica oleracea HOM05D004091 ORTHO05D004581 9.4e-32 140.6 135 55.6
DCAR_022765 Daucus carota HOM05D004091 ORTHO05D004581 9.4e-32 140.6 136 52.9
Lalb_Chr14g0374401 Lupinus albus HOM05D004091 ORTHO05D004581 1.2e-31 140.2 135 53.3
Migut.D02290 Erythranthe guttata HOM05D004091 ORTHO05D004581 1.6e-31 139.8 135 51.9
Nitab4.5_0001634g0050 Nicotiana tabacum HOM05D004091 ORTHO05D004581 2.1e-31 139.4 135 54.1
BcaC02g10950 Brassica carinata HOM05D004091 ORTHO05D004581 2.7e-31 139.0 135 55.6
C04p23350 Brassica napus HOM05D004091 ORTHO05D004581 2.7e-31 139.0 135 55.6
Nn6g35225 Nelumbo nucifera HOM05D004091 ORTHO05D004581 2.7e-31 139.0 140 55.0
Nitab4.5_0001634g0060 Nicotiana tabacum HOM05D004091 ORTHO05D004581 2.7e-31 139.0 135 53.3
FAN16G2177 Fragaria x ananassa HOM05D004091 ORTHO05D004581 3.6e-31 138.7 136 57.4
Prupe.6G112600 Prunus persica HOM05D004091 ORTHO05D004581 4.7e-31 138.3 138 54.3
A07p18700 Brassica napus HOM05D004091 ORTHO05D004581 8.0e-31 137.5 135 53.3
MBI13_g13834_MAGBIO Magnolia biondii HOM05D004091 ORTHO05D004581 1.0e-30 137.1 140 52.9
AT2G28160 Arabidopsis thaliana HOM05D004091 ORTHO05D004581 1.4e-30 136.7 135 52.6
Cc01_g10310 Coffea canephora HOM05D004091 ORTHO05D004581 1.4e-30 136.7 135 54.8
Nitab4.5_0001897g0030 Nicotiana tabacum HOM05D004091 ORTHO05D004581 1.4e-30 136.7 135 52.6
Migut.D02289 Erythranthe guttata HOM05D004091 ORTHO05D004581 1.8e-30 136.3 136 52.2
Peaxi162Scf00490g00018 Petunia axillaris HOM05D004091 ORTHO05D004581 1.8e-30 136.3 135 50.4
Cpa.g.c28125.2 Carica papaya HOM05D004091 ORTHO05D004581 2.3e-30 136.0 135 51.9
Phvul.011G086200 Phaseolus vulgaris HOM05D004091 ORTHO05D004581 2.3e-30 136.0 134 51.5
RcHm_v2.0_Chr5g0056871 Rosa chinensis HOM05D004091 ORTHO05D004581 4.0e-30 135.2 136 55.1
PGSC0003DMG400019017 Solanum tuberosum HOM05D004091 ORTHO05D004581 5.2e-30 134.8 142 50.7
MSTRG.18701 Avicennia marina HOM05D004091 ORTHO05D004581 6.7e-30 134.4 142 50.7
BcaB01g03093 Brassica carinata HOM05D004091 ORTHO05D004581 6.7e-30 134.4 135 51.9
CAN.G246.1 Capsicum annuum HOM05D004091 ORTHO05D004581 8.8e-30 134.0 141 50.4
PSO801G0814 Papaver somniferum HOM05D004091 ORTHO05D004581 8.8e-30 134.0 140 51.4
BraA07t29581Z Brassica rapa HOM05D004091 ORTHO05D004581 1.2e-29 133.7 135 52.6
FvH4_3g30650 Fragaria vesca HOM05D004091 ORTHO05D004581 1.2e-29 133.7 136 53.7
DCAR_006116 Daucus carota HOM05D004091 ORTHO05D004581 1.5e-29 133.3 136 50.0
MD03G1127500 Malus domestica HOM05D004091 ORTHO05D004581 1.5e-29 133.3 135 53.3
C03p31680 Brassica napus HOM05D004091 ORTHO05D004581 2.0e-29 132.9 135 51.9
FAN11G2030 Fragaria x ananassa HOM05D004091 ORTHO05D004581 2.0e-29 132.9 136 53.7
BcaB02g10153 Brassica carinata HOM05D004091 ORTHO05D004581 3.3e-29 132.1 135 54.1
BcaC02g08204 Brassica carinata HOM05D004091 ORTHO05D004581 7.5e-29 131.0 135 52.6
BolC4t27254H Brassica oleracea HOM05D004091 ORTHO05D004581 7.5e-29 131.0 135 52.6
BraA04t17704Z Brassica rapa HOM05D004091 ORTHO05D004581 7.5e-29 131.0 135 52.6
HanXRQChr11g0346541 Helianthus annuus HOM05D004091 ORTHO05D004581 7.5e-29 131.0 134 48.5
BcaB06g28191 Brassica carinata HOM05D004091 ORTHO05D004581 9.7e-29 130.6 137 52.6
MD03G1129100 Malus domestica HOM05D004091 ORTHO05D004581 9.7e-29 130.6 143 54.5
Sopen06g017530 Solanum pennellii HOM05D004091 ORTHO05D004581 9.7e-29 130.6 142 49.3
A03p26390 Brassica napus HOM05D004091 ORTHO05D004581 1.3e-28 130.2 135 51.1
BraA03t11854Z Brassica rapa HOM05D004091 ORTHO05D004581 1.3e-28 130.2 135 51.1
Atru.chr3.3512 Acer truncatum HOM05D004091 ORTHO05D004581 1.7e-28 129.8 135 52.6
BcaC01g04962 Brassica carinata HOM05D004091 ORTHO05D004581 1.7e-28 129.8 135 51.1
BolC3t15510H Brassica oleracea HOM05D004091 ORTHO05D004581 1.7e-28 129.8 135 51.1
A04p21360 Brassica napus HOM05D004091 ORTHO05D004581 2.2e-28 129.4 136 52.2
Nitab4.5_0000870g0060 Nicotiana tabacum HOM05D004091 ORTHO05D004581 2.2e-28 129.4 132 52.3
DCAR_006122 Daucus carota HOM05D004091 ORTHO05D004581 2.8e-28 129.0 138 50.7
C04p57310 Brassica napus HOM05D004091 ORTHO05D004581 3.7e-28 128.6 135 51.9
Migut.N02544 Erythranthe guttata HOM05D004091 ORTHO05D004581 3.7e-28 128.6 149 47.0
Atru.chr3.3519 Acer truncatum HOM05D004091 ORTHO05D004581 1.1e-27 127.1 87 67.8
FvH4_3g30660 Fragaria vesca HOM05D004091 ORTHO05D004581 1.1e-27 127.1 136 52.9
PSO801G0107 Papaver somniferum HOM05D004091 ORTHO05D004581 1.1e-27 127.1 135 49.6
Solyc06g051550.4 Solanum lycopersicum HOM05D004091 ORTHO05D004581 1.1e-27 127.1 142 49.3
VMungo1127G1339 Vigna mungo HOM05D004091 ORTHO05D004581 1.4e-27 126.7 134 48.5
HanXRQChr11g0346631 Helianthus annuus HOM05D004091 ORTHO05D004581 1.8e-27 126.3 134 49.3
CAN.G2082.3 Capsicum annuum HOM05D004091 ORTHO05D004581 9.1e-27 124.0 141 48.2
Ciclev10029810m.g Citrus clementina HOM05D004091 ORTHO05D004581 2.7e-26 122.5 133 51.9
Gohir.D09G088575 Gossypium hirsutum HOM05D004091 ORTHO05D004581 2.7e-26 122.5 117 53.8
Sed0002152 Sechium edule HOM05D004091 ORTHO05D004581 2.7e-26 122.5 96 60.4
CANSAT54G0298 Cannabis sativa HOM05D004091 ORTHO05D004581 3.5e-26 122.1 143 50.3
FAN21G0713 Fragaria x ananassa HOM05D004091 ORTHO05D004581 2.2e-25 119.4 146 50.0
Lsat_1_v5_gn_1_64640 Lactuca sativa HOM05D004091 ORTHO05D004581 2.9e-25 119.0 134 47.8
HanXRQChr11g0346551 Helianthus annuus HOM05D004091 ORTHO05D004581 3.8e-25 118.6 134 46.3
HanXRQChr01g0019641 Helianthus annuus HOM05D004091 ORTHO05D004581 5.0e-25 118.2 135 47.4
Lj2C1007G8 Lonicera japonica HOM05D004091 ORTHO05D004581 5.0e-25 118.2 120 51.7
PSO063G6410 Papaver somniferum HOM05D004091 ORTHO05D004581 1.5e-24 116.7 137 48.9
Glyma.12G081200 Glycine max HOM05D004091 ORTHO05D004581 1.9e-24 116.3 121 49.6
SalBow3G2912 Salvia bowleyana HOM05D004091 ORTHO05D004581 9.4e-24 114.0 140 47.9
HanXRQChr11g0346601 Helianthus annuus HOM05D004091 ORTHO05D004581 6.1e-23 111.3 134 42.5
PSO801G0681 Papaver somniferum HOM05D004091 ORTHO05D004581 1.0e-22 110.5 139 46.0
SalBow6G6360 Salvia bowleyana HOM05D004091 ORTHO05D004581 3.0e-22 109.0 142 44.4
ECA248G3340 Erigeron canadensis HOM05D004091 ORTHO05D004581 4.0e-22 108.6 140 45.7
MD03G1127600 Malus domestica HOM05D004091 ORTHO05D004581 1.5e-21 106.7 119 52.1
Ah.01g003340 Amaranthus hybridus HOM05D004091 ORTHO05D004581 4.4e-21 105.1 108 50.9
RcHm_v2.0_Chr5g0056881 Rosa chinensis HOM05D004091 ORTHO05D004581 2.8e-20 102.4 87 62.1
DCAR_032197 Daucus carota HOM05D004091 ORTHO05D004581 3.1e-19 99.0 91 51.6
ClCG02G021600 Citrullus lanatus HOM05D004091 ORTHO05D004581 1.6e-18 96.7 111 50.5
ATR0329G004 Amborella trichopoda HOM05D004091 ORTHO05D004581 2.0e-18 96.3 139 38.1
Peaxi162Scf00530g00066 Petunia axillaris HOM05D004091 ORTHO05D004581 5.0e-17 91.7 91 45.1
CDE04G2019 Ceratophyllum demersum HOM05D004091 ORTHO05D004581 1.9e-16 89.7 99 44.4
Hund01519 Selenicereus undatus HOM05D004091 ORTHO05D004581 1.0e-14 84.0 99 43.4
PSO339G2885 Papaver somniferum HOM05D004091 ORTHO05D004581 4.4e-13 78.6 135 36.3
HPP92_023195 Vanilla planifolia HOM05D004091 ORTHO05D004581 1.1e-11 73.9 140 38.6
unitig_899.g15363 Utricularia gibba HOM05D004091 ORTHO05D004581 1.7e-09 66.6 144 34.7
ATR0329G051 Amborella trichopoda HOM05D004091 ORTHO05D004581 1.5e-08 63.5 112 39.3
SEGI_19676 Sequoiadendron giganteum HOM05D000884 ORTHO05D004581 4.3e-08 62.0 144 31.9
SEGI_20940 Sequoiadendron giganteum HOM05D000884 ORTHO05D004581 4.3e-08 62.0 144 31.9
Actinidia07184 Actinidia chinensis HOM05D004091 ORTHO05D004581 5.2e-06 55.1 53 56.6


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