Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 5.4e-75 284.3 145 100.0
CSS0042063 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 2.7e-42 175.6 94 100.0
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 4.6e-34 148.3 144 58.3
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 4.9e-28 128.3 146 49.3
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 6.4e-28 127.9 143 52.4
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 8.4e-28 127.5 146 53.4
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 2.1e-26 122.9 143 49.0
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 3.5e-26 122.1 174 45.4
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 4.6e-26 121.7 144 49.3
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 7.9e-26 120.9 142 49.3
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 2.3e-25 119.4 143 49.7
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 6.7e-25 117.9 143 49.7
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 8.7e-25 117.5 140 49.3
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 1.1e-24 117.1 143 46.2
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 1.9e-24 116.3 143 48.3
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 7.4e-24 114.4 149 41.6
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 7.4e-24 114.4 154 45.5
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 1.3e-23 113.6 151 45.0
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 1.3e-23 113.6 149 43.6
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 2.8e-23 112.5 147 42.9
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 2.8e-23 112.5 157 45.2
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 3.7e-23 112.1 155 41.3
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 8.2e-23 110.9 161 43.5
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 8.2e-23 110.9 144 47.9
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 1.1e-22 110.5 158 44.3
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 1.4e-22 110.2 155 41.3
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 3.1e-22 109.0 153 42.5
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 5.3e-22 108.2 153 41.8
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 6.9e-22 107.8 179 38.0
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 9.0e-22 107.5 143 46.2
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 9.0e-22 107.5 143 46.2
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 1.5e-21 106.7 145 44.1
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 2.6e-21 105.9 144 46.5
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 7.6e-21 104.4 147 41.5
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 1.0e-20 104.0 144 43.1
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 2.9e-20 102.4 144 44.4
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 2.9e-20 102.4 154 43.5
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 3.8e-20 102.1 151 43.7
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 4.9e-20 101.7 127 45.7
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 6.5e-20 101.3 159 40.3
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 6.5e-20 101.3 157 38.2
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 8.4e-20 100.9 144 43.1
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 1.1e-19 100.5 144 43.8
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 1.4e-19 100.1 144 42.4
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 1.9e-19 99.8 157 42.0
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 4.2e-19 98.6 102 47.1
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 9.3e-19 97.4 50 84.0
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 9.3e-19 97.4 142 40.8
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 3.5e-18 95.5 139 41.7
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 1.3e-17 93.6 155 39.4
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 2.3e-17 92.8 58 69.0
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 2.3e-17 92.8 183 34.4
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 6.7e-17 91.3 172 34.9
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 6.7e-17 91.3 172 34.9
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 6.7e-17 91.3 162 39.5
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 1.5e-16 90.1 187 33.2
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 1.5e-16 90.1 203 32.0
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 3.3e-16 89.0 73 61.6
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 3.3e-16 89.0 73 61.6
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 5.7e-16 88.2 140 39.3
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 7.4e-16 87.8 143 38.5
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 9.7e-16 87.4 169 35.5
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 3.7e-15 85.5 126 36.5
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 3.7e-15 85.5 122 41.8
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 4.8e-15 85.1 171 32.7
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 8.2e-15 84.3 194 30.9
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 8.2e-15 84.3 178 34.8
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 8.2e-15 84.3 183 33.3
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 1.4e-14 83.6 146 37.0
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 1.8e-14 83.2 141 36.9
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 1.8e-14 83.2 171 32.7
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 2.4e-14 82.8 177 31.6
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 4.1e-14 82.0 169 33.7
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 6.9e-14 81.3 158 34.8
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 9.0e-14 80.9 183 32.2
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 1.2e-13 80.5 137 36.5
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 5.9e-13 78.2 179 30.7
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 5.9e-13 78.2 105 41.9
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 7.7e-13 77.8 181 33.1
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 1.3e-12 77.0 178 30.3
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 1.3e-12 77.0 144 34.7
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 2.9e-12 75.9 182 30.8
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 8.5e-12 74.3 182 30.2
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 3.2e-11 72.4 50 56.0
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 5.5e-11 71.6 154 34.4
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 9.4e-11 70.9 173 30.6
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 9.4e-11 70.9 74 51.4
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 4.6e-10 68.6 105 36.2
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 1.0e-09 67.4 44 63.6
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 1.8e-09 66.6 47 55.3
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 3.9e-09 65.5 105 40.0
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 5.1e-09 65.1 113 38.1
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 6.7e-09 64.7 206 27.2
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 8.8e-09 64.3 174 29.3
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 8.8e-09 64.3 106 38.7
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 7.4e-08 61.2 104 39.4
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 3.7e-07 58.9 80 48.8
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 6.3e-07 58.2 66 54.5
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 8.2e-07 57.8 100 36.0


User provided reference genes

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