Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 0.0e+00 1261.1 630 100.0
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 0.0e+00 1184.9 609 97.2
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 0.0e+00 1092.4 630 86.7
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 0.0e+00 1092.0 631 86.5
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 4.3e-312 1074.3 628 83.0
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 3.9e-311 1070.8 628 83.6
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 6.4e-306 1053.5 628 82.8
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 3.5e-304 1047.7 631 80.2
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 1.6e-301 1038.9 657 80.8
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 6.2e-301 1036.9 675 76.1
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 5.2e-300 1033.9 631 80.3
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 2.1e-296 1021.9 631 78.6
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 2.7e-296 1021.5 631 78.4
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 6.0e-296 1020.4 631 79.4
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.0e-295 1019.6 629 79.2
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.3e-295 1019.2 631 78.4
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 8.1e-293 1010.0 630 78.3
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 1.8e-292 1008.8 630 77.9
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 3.1e-292 1008.1 634 77.1
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 4.0e-292 1007.7 632 77.4
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 6.8e-292 1006.9 626 79.1
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 2.6e-291 1005.0 630 79.4
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 4.4e-291 1004.2 636 76.7
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.9e-289 998.8 633 76.6
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 4.6e-288 994.2 631 76.5
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 2.3e-287 991.9 629 77.4
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 1.5e-286 989.2 634 77.0
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 4.3e-286 987.6 608 78.5
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.2e-285 986.1 626 77.2
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 8.1e-285 983.4 626 76.2
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.8e-284 982.2 631 76.4
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.8e-284 982.2 606 77.7
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 2.4e-284 981.9 666 75.1
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 5.8e-283 977.2 629 76.2
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 5.8e-283 977.2 629 74.9
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 9.9e-283 976.5 631 76.5
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.7e-282 975.7 628 75.6
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.9e-282 974.9 626 75.2
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.9e-282 974.9 629 76.3
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 8.4e-282 973.4 626 74.9
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 1.1e-281 973.0 635 74.5
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 1.4e-281 972.6 630 74.1
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 3.2e-281 971.5 634 75.6
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 4.2e-281 971.1 628 74.7
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 9.2e-281 969.9 630 74.6
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 3.9e-279 964.5 573 81.0
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 6.6e-279 963.8 625 75.2
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 7.3e-278 960.3 629 75.0
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 5.3e-276 954.1 643 72.6
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.5e-275 952.6 597 77.9
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 2.0e-275 952.2 634 73.2
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 3.4e-275 951.4 592 78.2
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 4.4e-275 951.0 595 78.2
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.7e-274 949.1 626 72.7
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 8.4e-274 946.8 626 72.4
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 1.6e-272 942.6 630 72.1
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 4.6e-272 941.0 626 73.0
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 3.9e-271 937.9 631 73.4
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 6.6e-271 937.2 631 73.5
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 9.6e-270 933.3 625 72.6
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.3e-269 932.9 624 72.0
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.3e-269 932.9 628 72.6
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 1.1e-268 929.9 631 73.1
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.6e-267 925.2 571 77.2
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 2.2e-266 922.2 586 76.3
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 7.1e-265 917.1 624 72.8
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 6.0e-264 914.1 636 72.0
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 8.7e-263 910.2 625 69.9
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.1e-260 903.3 625 69.8
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 3.1e-260 901.7 622 71.9
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 6.5e-258 894.0 621 71.8
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 7.1e-257 890.6 628 69.7
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 7.1e-257 890.6 627 71.3
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 7.4e-254 880.6 629 69.5
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 9.6e-254 880.2 589 72.0
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 4.8e-253 877.9 632 68.0
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 3.4e-251 871.7 625 69.1
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 2.9e-250 868.6 635 67.9
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 2.3e-247 859.0 633 66.8
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 8.7e-247 857.1 631 66.6
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.9e-246 855.9 630 66.8
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 4.3e-246 854.7 631 66.6
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 4.3e-246 854.7 630 67.6
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 3.7e-245 851.7 628 68.2
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 2.4e-244 849.0 633 66.8
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 2.4e-244 849.0 633 66.8
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 2.2e-234 815.8 632 64.2
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.1e-230 803.5 565 68.7
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 6.3e-229 797.7 601 65.1
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 3.1e-220 768.8 627 60.6
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.3e-218 763.5 440 85.2
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 5.0e-210 734.9 455 78.9
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 5.8e-190 668.3 448 72.1
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.2e-189 666.4 492 67.5
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 4.1e-188 662.1 416 77.6
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 4.0e-183 645.6 398 79.1
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 2.2e-181 639.8 632 51.7
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 4.1e-180 635.6 642 51.9
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 8.1e-160 568.2 418 68.7
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 6.6e-154 548.5 605 46.9
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.1e-151 541.2 399 67.7
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.8e-151 540.4 632 46.8
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 2.6e-142 510.0 607 47.9
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 1.1e-135 488.0 421 62.9
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 2.3e-122 443.7 273 83.5
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 3.5e-110 403.3 762 34.0
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.1e-55 222.2 181 61.3
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 2.9e-48 197.6 173 56.1
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 4.2e-47 193.7 163 60.7
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 3.6e-43 180.6 214 45.3
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 5.3e-42 176.8 152 57.2
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.3e-35 155.6 82 90.2
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.1e-23 115.9 220 38.2
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.6e-19 102.1 90 58.9
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.5e-17 95.5 80 63.8
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 5.3e-10 70.5 39 82.1
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 5.3e-10 70.5 40 82.5
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 7.7e-09 66.6 47 68.1


User provided reference genes

Program Settings