Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041944 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 8.2e-51 203.4 98 100.0
CSS0037375 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 2.6e-49 198.4 98 96.9
CSS0028054 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 7.6e-49 196.8 98 96.9
CSS0015976 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 2.3e-45 185.3 98 89.8
CSS0049549 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 8.7e-45 183.3 98 91.8
CSS0031232 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.8e-42 175.6 117 76.9
CSS0020344 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 4.1e-42 174.5 90 92.2
CSS0001881 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 4.6e-38 161.0 98 78.6
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 3.6e-30 134.8 91 65.9
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-28 128.6 89 64.0
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.7e-28 126.7 91 60.4
CSS0049418 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 9.4e-23 110.2 80 63.8
CSS0027359 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-20 102.1 89 48.3
CSS0036470 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 4.1e-18 94.7 75 53.3
CSS0014297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.9e-16 88.6 75 57.3
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-15 86.7 97 37.1
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-15 86.3 85 37.6
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-15 85.9 84 45.2
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.2e-15 85.1 85 38.8
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-15 84.7 84 45.2
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.2e-15 84.7 85 38.8
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.5e-15 84.3 85 38.8
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.5e-15 84.3 85 36.5
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.5e-15 84.3 86 40.7
CSS0002074 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.4e-15 83.6 89 40.4
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-14 82.8 84 44.0
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.6e-14 82.8 88 34.1
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-14 82.8 90 40.0
CSS0045787 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.6e-14 82.8 90 40.0
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.1e-14 82.4 86 38.4
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-14 82.0 91 42.9
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.1e-14 80.9 85 37.6
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-13 79.7 86 43.0
CSS0045195 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.8e-13 77.0 85 40.0
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.4e-12 74.7 97 33.0
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.5e-12 73.9 96 30.2
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-11 72.8 88 31.8
CSS0032088 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-11 72.8 84 36.9
CSS0041994 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-11 72.8 85 36.5
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.8e-11 71.2 84 36.9
CSS0031822 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.3e-11 70.5 54 50.0
vmacro19136 Vaccinium macrocarpon HOM05D001065 ORTHO05D003103 1.8e-10 69.3 84 38.1
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 2.4e-10 68.9 91 39.6
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 2.4e-10 68.9 88 38.6
CSS0032111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-10 68.6 96 29.2
CSS0035385 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.0e-10 67.4 85 34.1
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 9.1e-10 67.0 93 36.6
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 1.6e-09 66.2 82 37.8
CSS0028214 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-09 65.5 83 30.1
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 2.7e-09 65.5 86 34.9
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.5e-09 65.1 63 42.9
Lj2C63T5 Lonicera japonica HOM05D016027 ORTHO05D000022 3.5e-09 65.1 87 37.9
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.5e-09 64.7 85 30.6
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 5.9e-09 64.3 85 36.5
CSS0000227 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.9e-09 64.3 44 63.6
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-09 63.9 85 32.9
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.3e-08 63.2 85 29.4
vmacro04810 Vaccinium macrocarpon HOM05D000301 ORTHO05D000022 1.7e-08 62.8 91 35.2
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-08 62.4 89 37.1
CSS0006381 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-08 62.4 74 32.4
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.9e-08 62.0 86 32.6
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.8e-08 61.6 85 32.9
vmacro16872 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 3.8e-08 61.6 96 36.5
CSS0027610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.0e-08 61.2 44 61.4
CSS0035139 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.0e-08 61.2 44 61.4
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 5.0e-08 61.2 88 33.0
Actinidia03487 Actinidia chinensis HOM05D000003 ORTHO05D000022 6.5e-08 60.8 79 34.2
Atru.chr12.663 Acer truncatum HOM05D000003 ORTHO05D000022 8.5e-08 60.5 86 34.9
CSS0017504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.5e-08 60.5 73 37.0
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 8.5e-08 60.5 88 33.0
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 8.5e-08 60.5 88 33.0
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 8.5e-08 60.5 85 34.1
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 8.5e-08 60.5 89 33.7
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-07 60.1 85 41.2
CSS0048939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-07 60.1 82 30.5
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 1.9e-07 59.3 88 36.4
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-07 58.9 85 35.3
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 2.5e-07 58.9 91 35.2
CSS0016336 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.5e-07 58.9 87 23.0
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 4.2e-07 58.2 90 37.8
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-07 57.8 76 39.5
Atru.chr8.1100 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-07 57.8 87 39.1
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.5e-07 57.8 58 41.4
Atru.chr11.1190 Acer truncatum HOM05D000003 ORTHO05D000022 7.2e-07 57.4 86 33.7
Atru.chr3.1552 Acer truncatum HOM05D000003 ORTHO05D000022 9.4e-07 57.0 76 35.5
vmacro18663 Vaccinium macrocarpon HOM05D000010 ORTHO05D000022 9.4e-07 57.0 75 34.7
Atru.chr2.2708 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-06 56.6 90 33.3
Atru.chr8.2517 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-06 56.6 86 34.9
CSS0013630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-06 56.6 68 33.8
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 1.2e-06 56.6 78 35.9
COL.COLO4_30280 Corchorus olitorius HOM05D000155 ORTHO05D000022 1.6e-06 56.2 89 32.6
Lj4P794T17 Lonicera japonica HOM05D016027 ORTHO05D000022 1.6e-06 56.2 83 31.3
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-06 56.2 92 33.7
vmacro08980 Vaccinium macrocarpon HOM05D000055 ORTHO05D002202 1.6e-06 56.2 83 33.7
Atru.chr1.276 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-06 55.5 81 37.0
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-06 55.5 86 37.2
Peaxi162Scf00015g00940 Petunia axillaris HOM05D000145 ORTHO05D000115 2.7e-06 55.5 94 34.0
Phvul.001G128200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 2.7e-06 55.5 87 33.3
Sabra17G0024600 Salix brachista HOM05D000003 ORTHO05D000022 2.7e-06 55.5 99 33.3
CSS0007370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.6e-06 55.1 39 64.1
COL.COLO4_15712 Corchorus olitorius HOM05D066797 ORTHO05D029099 3.6e-06 55.1 90 30.0
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-06 54.7 86 32.6
RcHm_v2.0_Chr3g0484381 Rosa chinensis HOM05D000003 ORTHO05D000022 4.7e-06 54.7 86 31.4
RcHm_v2.0_Chr3g0484471 Rosa chinensis HOM05D000003 ORTHO05D000022 4.7e-06 54.7 86 31.4
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 6.1e-06 54.3 89 34.8
Atru.chr3.1879 Acer truncatum HOM05D000003 ORTHO05D000022 6.1e-06 54.3 86 30.2
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.1e-06 54.3 73 32.9
Lj8C275T19 Lonicera japonica HOM05D016027 ORTHO05D000022 6.1e-06 54.3 70 37.1
Atru.chr3.2099 Acer truncatum HOM05D000003 ORTHO05D000022 8.0e-06 53.9 86 33.7
QL01p018268 Quercus lobata HOM05D000155 ORTHO05D000022 8.0e-06 53.9 67 41.8
QL11p056556 Quercus lobata HOM05D000003 ORTHO05D000167 8.0e-06 53.9 93 28.0
Sabra17G0024800 Salix brachista HOM05D000003 ORTHO05D000022 8.0e-06 53.9 99 32.3


User provided reference genes

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