Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 8.8e-181 637.1 392 100.0
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.9e-130 469.9 379 77.0
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 5.3e-125 451.8 338 76.9
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 2.8e-118 429.5 337 71.8
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 9.0e-117 424.5 295 76.9
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 5.8e-116 421.8 306 75.2
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 5.8e-116 421.8 305 74.8
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.0e-115 421.0 345 72.2
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.4e-114 417.2 336 74.4
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 1.6e-113 413.7 304 73.7
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 2.1e-113 413.3 306 74.2
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 3.5e-113 412.5 305 74.4
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 7.9e-113 411.4 299 72.6
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 3.0e-112 409.5 292 74.7
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.5e-111 407.1 298 72.1
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 2.5e-111 406.4 276 81.5
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 3.3e-111 406.0 304 71.7
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 7.4e-111 404.8 298 71.8
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 9.6e-111 404.4 308 71.4
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 3.7e-110 402.5 260 78.1
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 6.3e-110 401.7 310 70.0
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 8.2e-110 401.4 306 70.9
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 1.8e-109 400.2 308 71.8
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 4.1e-109 399.1 307 71.3
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 4.1e-109 399.1 335 69.9
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 6.9e-109 398.3 339 71.1
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 1.2e-108 397.5 344 70.3
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.5e-108 397.1 313 68.4
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 2.2e-107 393.3 308 70.8
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 8.5e-107 391.3 307 69.1
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.4e-106 390.6 311 70.7
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 3.2e-106 389.4 335 67.8
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 4.2e-106 389.0 282 79.4
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 5.5e-106 388.7 299 70.6
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 9.3e-106 387.9 306 70.3
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 9.3e-106 387.9 301 70.8
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 1.8e-104 383.6 301 67.4
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 3.9e-104 382.5 307 68.4
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 3.9e-104 382.5 306 68.3
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 3.9e-104 382.5 335 63.6
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 5.1e-104 382.1 257 84.4
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 1.9e-103 380.2 310 66.8
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 2.5e-103 379.8 338 69.8
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 5.7e-103 378.6 294 71.8
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 5.7e-103 378.6 295 75.3
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 9.7e-103 377.9 300 67.7
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 9.7e-103 377.9 342 64.3
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 1.3e-102 377.5 374 65.2
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.1e-101 374.4 339 67.8
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.1e-101 374.4 302 65.9
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 3.1e-101 372.9 306 68.6
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 5.3e-101 372.1 328 67.7
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 6.9e-101 371.7 259 76.8
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 9.1e-101 371.3 344 60.5
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.5e-100 370.5 313 66.1
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 2.0e-100 370.2 260 82.7
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 3.4e-100 369.4 345 65.5
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 4.5e-100 369.0 299 66.2
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 4.5e-100 369.0 330 67.6
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 5.9e-100 368.6 333 67.0
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 5.9e-100 368.6 333 67.0
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 1.3e-99 367.5 329 63.5
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.2e-99 366.7 290 69.3
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 2.2e-99 366.7 241 79.7
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 5.0e-99 365.5 299 72.9
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.9e-98 363.6 299 76.9
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.2e-98 362.5 314 63.7
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 9.4e-98 361.3 238 79.0
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.2e-97 360.9 240 78.3
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 6.1e-97 358.6 274 72.3
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 3.7e-94 349.4 314 58.6
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 1.1e-93 347.8 319 64.6
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 1.0e-91 341.3 275 68.7
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 3.7e-86 322.8 244 67.6
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 6.3e-86 322.0 241 71.4
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 2.0e-84 317.0 274 71.5
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 1.1e-82 311.2 218 77.5
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 4.8e-78 295.8 213 73.2
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 2.9e-75 286.6 223 68.2
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 2.0e-71 273.9 159 84.3
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 2.0e-68 263.8 298 50.7
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.3e-62 244.6 212 67.9
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 3.7e-62 243.0 241 58.9
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 1.1e-61 241.5 245 57.6
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 1.6e-60 237.7 162 76.5
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.9e-60 235.7 172 100.0
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 4.3e-58 229.6 190 70.0
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 4.7e-57 226.1 173 74.0
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.3e-50 203.4 137 76.6
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 2.8e-41 173.7 277 36.5
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 3.6e-41 173.3 109 83.5
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 2.3e-40 170.6 183 53.6
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 2.6e-31 140.6 152 48.7
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.1e-28 131.0 74 98.6
CSS0036326 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.9e-22 110.5 170 44.1
QL03p065499 Quercus lobata HOM05D007647 ORTHO05D009644 9.6e-10 68.9 84 50.0


User provided reference genes

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