Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.6e-149 531.9 250 100.0
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.1e-123 444.9 250 86.4
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 7.0e-123 444.1 250 86.4
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.5e-120 436.4 231 90.5
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 2.6e-109 399.1 260 74.2
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 2.2e-108 396.0 250 74.8
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 4.9e-108 394.8 250 74.4
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 4.1e-107 391.7 250 74.4
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 7.0e-107 391.0 250 72.8
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 8.6e-105 384.0 254 68.9
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 7.3e-104 380.9 249 71.9
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 6.8e-102 374.4 250 68.4
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.5e-101 373.2 250 68.4
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 1.5e-101 373.2 250 69.2
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 2.0e-101 372.9 250 70.4
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 2.6e-101 372.5 250 68.4
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 3.4e-101 372.1 250 69.2
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 1.7e-100 369.8 250 69.2
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 8.3e-100 367.5 250 69.2
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 8.3e-100 367.5 251 69.7
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 1.1e-99 367.1 249 69.1
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.1e-99 367.1 268 64.6
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 1.9e-99 366.3 250 68.8
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 1.9e-99 366.3 250 68.8
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 1.9e-99 366.3 250 69.2
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 3.2e-99 365.5 250 68.4
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 4.1e-99 365.2 250 67.2
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 4.1e-99 365.2 251 69.7
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 4.1e-99 365.2 251 69.7
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 7.1e-99 364.4 250 69.6
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 7.1e-99 364.4 250 68.8
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 7.1e-99 364.4 250 70.0
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 9.2e-99 364.0 250 69.2
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 9.2e-99 364.0 250 68.4
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 1.2e-98 363.6 250 66.0
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 2.1e-98 362.8 249 68.3
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 2.1e-98 362.8 233 69.5
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 2.1e-98 362.8 250 66.4
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 3.5e-98 362.1 250 66.8
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 4.6e-98 361.7 250 67.2
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 4.6e-98 361.7 249 68.3
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 6.0e-98 361.3 250 68.0
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 7.8e-98 360.9 250 67.6
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 1.3e-97 360.1 233 67.8
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 2.3e-97 359.4 249 66.7
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 3.0e-97 359.0 248 67.7
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 3.9e-97 358.6 250 67.2
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 1.5e-96 356.7 250 68.4
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 1.5e-96 356.7 250 67.2
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 1.5e-96 356.7 250 66.0
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 1.5e-96 356.7 249 68.7
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 1.9e-96 356.3 249 67.9
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 2.5e-96 355.9 250 66.0
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 3.3e-96 355.5 250 66.4
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 3.3e-96 355.5 256 65.6
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 4.3e-96 355.1 251 65.7
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 7.3e-96 354.4 250 64.4
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 9.5e-96 354.0 252 70.6
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 1.2e-95 353.6 250 64.4
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 2.1e-95 352.8 251 66.9
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 2.8e-95 352.4 250 66.4
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 2.8e-95 352.4 251 64.5
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 3.6e-95 352.1 250 65.2
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 6.2e-95 351.3 250 63.6
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 6.2e-95 351.3 236 68.6
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 8.1e-95 350.9 245 66.9
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 8.1e-95 350.9 250 65.6
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 8.1e-95 350.9 250 64.4
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 8.1e-95 350.9 250 64.4
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 1.1e-94 350.5 250 64.0
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 1.1e-94 350.5 250 64.0
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 1.8e-94 349.7 250 66.4
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 3.1e-94 349.0 250 64.4
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 4.0e-94 348.6 236 69.1
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 4.0e-94 348.6 236 69.1
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 5.2e-94 348.2 250 66.8
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 8.9e-94 347.4 233 69.5
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 8.9e-94 347.4 251 64.9
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 8.9e-94 347.4 250 63.6
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 8.9e-94 347.4 250 64.4
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 1.2e-93 347.1 250 63.6
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 2.6e-93 345.9 251 64.1
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 3.4e-93 345.5 250 67.2
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 4.4e-93 345.1 250 62.4
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 4.4e-93 345.1 250 63.2
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 9.9e-93 344.0 250 64.8
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 1.3e-92 343.6 250 61.6
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 1.7e-92 343.2 252 64.7
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 1.7e-92 343.2 250 63.2
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 2.2e-92 342.8 251 61.8
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 2.9e-92 342.4 251 61.8
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 3.8e-92 342.0 250 63.6
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 4.9e-92 341.7 260 63.8
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 1.1e-91 340.5 252 61.5
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 1.9e-91 339.7 259 64.1
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 7.1e-91 337.8 280 56.8
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 7.1e-91 337.8 250 62.4
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 9.2e-91 337.4 250 63.6
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 2.1e-90 336.3 249 62.7
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 4.6e-90 335.1 229 68.1
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 1.0e-89 334.0 250 63.2
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 1.7e-89 333.2 250 62.0
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 3.0e-89 332.4 262 59.2
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 3.9e-89 332.0 240 62.5
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 8.6e-89 330.9 240 62.5
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 1.1e-88 330.5 250 59.2
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.5e-88 330.1 203 80.3
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 5.6e-88 328.2 250 64.0
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 2.8e-87 325.9 252 62.3
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 8.1e-87 324.3 338 49.1
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 2.4e-86 322.8 251 59.0
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 2.4e-86 322.8 251 59.0
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 5.2e-86 321.6 240 61.2
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.4e-85 318.9 179 84.9
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 9.9e-85 317.4 253 60.5
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 2.1e-82 309.7 245 60.4
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 8.1e-79 297.7 150 93.3
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 1.8e-78 296.6 249 55.8
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 2.6e-77 292.7 240 57.1
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 5.8e-77 291.6 179 72.1
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 2.9e-76 289.3 251 56.2
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 2.9e-76 289.3 251 51.8
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 3.8e-76 288.9 232 56.9
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 1.1e-75 287.3 253 55.3
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 6.0e-66 255.0 190 63.2
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 8.7e-65 251.1 244 52.9
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 9.0e-62 241.1 235 53.2
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 6.3e-55 218.4 233 49.4
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 3.1e-54 216.1 283 41.3
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 1.0e-52 211.1 171 63.7
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 8.5e-52 208.0 250 43.6
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 2.5e-48 196.4 262 41.2
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 8.5e-44 181.4 246 43.1
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 7.4e-40 168.3 274 36.9
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 5.2e-33 145.6 77 79.2
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 5.3e-22 109.0 69 65.2
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 1.2e-18 97.8 284 27.1
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 6.1e-18 95.5 92 55.4
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 8.0e-18 95.1 50 82.0
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 1.8e-17 94.0 146 39.0
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 4.8e-15 85.9 141 38.3
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.1e-14 84.7 108 48.1
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 1.2e-13 81.3 44 79.5
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 2.0e-13 80.5 45 73.3
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 6.1e-10 68.9 40 77.5
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 1.5e-08 64.3 43 65.1
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 2.2e-07 60.5 43 62.8


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