Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041461 Camellia sinensis var. sinensis HOM05D006973 ORTHO05D008636 1.9e-44 183.0 167 100.0
Dinv21566 Davidia involucrata HOM05D006973 ORTHO05D008636 3.2e-15 85.9 65 67.7
Actinidia32515 Actinidia chinensis HOM05D006973 ORTHO05D008636 2.1e-14 83.2 64 68.8
Gohir.D11G064600 Gossypium hirsutum HOM05D006973 ORTHO05D008636 2.7e-14 82.8 66 62.1
Gorai.007G069800 Gossypium raimondii HOM05D006973 ORTHO05D008636 2.7e-14 82.8 66 62.1
Thecc.01G161800 Theobroma cacao HOM05D006973 ORTHO05D008636 2.7e-14 82.8 65 64.6
QL08p044096 Quercus lobata HOM05D006973 ORTHO05D008636 6.1e-14 81.6 65 64.6
Cfa021245 Carpinus fangiana HOM05D006973 ORTHO05D008636 8.0e-14 81.3 66 63.6
Haze_13497 Corylus avellana HOM05D006973 ORTHO05D008636 8.0e-14 81.3 64 64.1
Potri.005G201500 Populus trichocarpa HOM05D006973 ORTHO05D008636 1.8e-13 80.1 65 63.1
Gohir.A11G060500 Gossypium hirsutum HOM05D006973 ORTHO05D008636 2.3e-13 79.7 66 59.1
Sabra02G0048600 Salix brachista HOM05D006973 ORTHO05D008636 4.0e-13 79.0 66 59.1
DCAR_013315 Daucus carota HOM05D006973 ORTHO05D008636 6.7e-13 78.2 65 56.9
Duzib147G0021 Durio zibethinus HOM05D006973 ORTHO05D008636 6.7e-13 78.2 65 60.0
Duzib187G1733 Durio zibethinus HOM05D006973 ORTHO05D008636 6.7e-13 78.2 66 60.6
Potri.002G060100 Populus trichocarpa HOM05D006973 ORTHO05D008636 8.8e-13 77.8 66 59.1
Rhsim06G0116300 Rhododendron simsii HOM05D006973 ORTHO05D008636 8.8e-13 77.8 57 68.4
TAR629G2498 Trochodendron aralioides HOM05D006973 ORTHO05D008636 8.8e-13 77.8 64 60.9
PGR042G1786 Punica granatum HOM05D006973 ORTHO05D008636 1.5e-12 77.0 59 64.4
RcHm_v2.0_Chr2g0151491 Rosa chinensis HOM05D006973 ORTHO05D008636 1.5e-12 77.0 66 59.1
Nitab4.5_0003934g0010 Nicotiana tabacum HOM05D006973 ORTHO05D008636 2.0e-12 76.6 65 60.0
Prupe.3G172700 Prunus persica HOM05D006973 ORTHO05D008636 2.0e-12 76.6 66 59.1
Nitab4.5_0001675g0100 Nicotiana tabacum HOM05D006973 ORTHO05D008636 2.6e-12 76.3 66 57.6
Peaxi162Scf00111g00009 Petunia axillaris HOM05D006973 ORTHO05D008636 2.6e-12 76.3 66 57.6
Atru.chr6.2093 Acer truncatum HOM05D006973 ORTHO05D008636 3.3e-12 75.9 62 59.7
Phvul.008G191400 Phaseolus vulgaris HOM05D006973 ORTHO05D008636 3.3e-12 75.9 66 59.1
VMungo0647G1950 Vigna mungo HOM05D006973 ORTHO05D008636 3.3e-12 75.9 66 59.1
FvH4_6g38230 Fragaria vesca HOM05D006973 ORTHO05D008636 4.4e-12 75.5 66 57.6
FAN02G1229 Fragaria x ananassa HOM05D006973 ORTHO05D008636 4.4e-12 75.5 66 57.6
FAN14G5571 Fragaria x ananassa HOM05D006973 ORTHO05D008636 4.4e-12 75.5 66 57.6
Manes.02G084300 Manihot esculenta HOM05D006973 ORTHO05D008636 4.4e-12 75.5 66 59.1
Glyma.14G028000 Glycine max HOM05D006973 ORTHO05D008636 5.7e-12 75.1 65 60.0
Nn3g20922 Nelumbo nucifera HOM05D006973 ORTHO05D008636 5.7e-12 75.1 66 56.1
FAN05G1052 Fragaria x ananassa HOM05D006973 ORTHO05D008636 7.5e-12 74.7 66 57.6
Glyma.02G286900 Glycine max HOM05D006973 ORTHO05D008636 7.5e-12 74.7 66 57.6
CAN.G585.39 Capsicum annuum HOM05D006973 ORTHO05D008636 9.7e-12 74.3 65 56.9
ClCG09G022400 Citrullus lanatus HOM05D006973 ORTHO05D008636 9.7e-12 74.3 66 59.1
FAN09G4519 Fragaria x ananassa HOM05D006973 ORTHO05D008636 9.7e-12 74.3 66 56.1
Aqoxy4G00147 Aquilegia oxysepala HOM05D006973 ORTHO05D008636 2.2e-11 73.2 66 54.5
Nn6g34359 Nelumbo nucifera HOM05D006973 ORTHO05D008636 2.2e-11 73.2 66 53.0
CANSAT64G0305 Cannabis sativa HOM05D006973 ORTHO05D008636 2.8e-11 72.8 62 64.5
MELO3C014471.2 Cucumis melo HOM05D006973 ORTHO05D008636 2.8e-11 72.8 66 57.6
CsaV3_6G038070 Cucumis sativus L. HOM05D006973 ORTHO05D008636 2.8e-11 72.8 66 57.6
Lalb_Chr17g0348291 Lupinus albus HOM05D006973 ORTHO05D008636 2.8e-11 72.8 66 53.0
Medtr5g091690 Medicago truncatula HOM05D006973 ORTHO05D008636 4.8e-11 72.0 66 56.1
Oeu020059.1 Olea europaea HOM05D006973 ORTHO05D008636 6.3e-11 71.6 66 57.6
Sed0009997 Sechium edule HOM05D006973 ORTHO05D008636 8.2e-11 71.2 66 57.6
TPR.G12665 Trifolium pratense HOM05D006973 ORTHO05D008636 8.2e-11 71.2 65 55.4
Lalb_Chr10g0106711 Lupinus albus HOM05D006973 ORTHO05D008636 1.1e-10 70.9 63 55.6
Lalb_Chr04g0248771 Lupinus albus HOM05D006973 ORTHO05D008636 1.8e-10 70.1 62 58.1
Oeu040038.1 Olea europaea HOM05D006973 ORTHO05D008636 5.3e-10 68.6 66 56.1
Solyc07g056360.1 Solanum lycopersicum HOM05D006973 ORTHO05D008636 5.3e-10 68.6 62 56.5
MBI07_g21782_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 7.0e-10 68.2 66 53.0
MBI07_g41313_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 7.0e-10 68.2 66 53.0
Sp5g04010 Schrenkiella parvula HOM05D006973 ORTHO05D008636 9.1e-10 67.8 66 53.0
Sopen07g029740 Solanum pennellii HOM05D006973 ORTHO05D008636 9.1e-10 67.8 62 56.5
PGSC0003DMG400017344 Solanum tuberosum HOM05D006973 ORTHO05D008636 9.1e-10 67.8 62 54.8
MSTRG.14293 Avicennia marina HOM05D006973 ORTHO05D008636 1.2e-09 67.4 66 53.0
Carub.0005s2563 Capsella rubella HOM05D006973 ORTHO05D008636 1.2e-09 67.4 62 56.5
Thhalv10006323m.g Eutrema salsugineum HOM05D006973 ORTHO05D008636 1.2e-09 67.4 66 53.0
LjContig00310g0018130 Lotus japonicus HOM05D006973 ORTHO05D008636 1.2e-09 67.4 63 57.1
AT3G58850 Arabidopsis thaliana HOM05D006973 ORTHO05D008636 1.6e-09 67.0 62 56.5
arahy.Tifrunner.gnm1.ann1.9T2B0R Arachis hypogaea HOM05D006973 ORTHO05D008636 2.0e-09 66.6 50 62.0
arahy.Tifrunner.gnm1.ann1.D7Q1BT Arachis hypogaea HOM05D006973 ORTHO05D008636 2.0e-09 66.6 53 58.5
arahy.Tifrunner.gnm1.ann1.SG1KTY Arachis hypogaea HOM05D006973 ORTHO05D008636 2.0e-09 66.6 53 58.5
CARHR169260 Cardamine hirsuta HOM05D006973 ORTHO05D008636 2.0e-09 66.6 62 54.8
BcaC02g07217 Brassica carinata HOM05D006973 ORTHO05D008636 2.7e-09 66.2 66 47.0
A04p32440 Brassica napus HOM05D006973 ORTHO05D008636 2.7e-09 66.2 66 47.0
C04p69950 Brassica napus HOM05D006973 ORTHO05D008636 2.7e-09 66.2 66 47.0
BolC4t28495H Brassica oleracea HOM05D006973 ORTHO05D008636 2.7e-09 66.2 66 47.0
BraA04t18696Z Brassica rapa HOM05D006973 ORTHO05D008636 2.7e-09 66.2 66 47.0
Carub.0004s2531 Capsella rubella HOM05D006973 ORTHO05D008636 2.7e-09 66.2 66 48.5
AL5G40650 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 3.5e-09 65.9 62 56.5
A03p23820 Brassica napus HOM05D006973 ORTHO05D008636 4.5e-09 65.5 66 47.0
BraA03t11597Z Brassica rapa HOM05D006973 ORTHO05D008636 4.5e-09 65.5 66 47.0
BraA05t19306Z Brassica rapa HOM05D006973 ORTHO05D008636 4.5e-09 65.5 66 47.0
BcaB06g29268 Brassica carinata HOM05D006973 ORTHO05D008636 5.9e-09 65.1 66 47.0
BcaB06g29270 Brassica carinata HOM05D006973 ORTHO05D008636 5.9e-09 65.1 66 47.0
Aa31LG1G24640 Aethionema arabicum HOM05D006973 ORTHO05D008636 7.7e-09 64.7 62 50.0
Ciclev10033026m.g Citrus clementina HOM05D006973 ORTHO05D008636 7.7e-09 64.7 62 53.2
BcaB02g08235 Brassica carinata HOM05D006973 ORTHO05D008636 1.3e-08 63.9 67 52.2
BcaC02g12446 Brassica carinata HOM05D006973 ORTHO05D008636 1.3e-08 63.9 66 45.5
C04p03810 Brassica napus HOM05D006973 ORTHO05D008636 1.3e-08 63.9 66 45.5
BolC4t22017H Brassica oleracea HOM05D006973 ORTHO05D008636 1.3e-08 63.9 66 45.5
C03p28410 Brassica napus HOM05D006973 ORTHO05D008636 1.7e-08 63.5 63 47.6
BolC3t15210H Brassica oleracea HOM05D006973 ORTHO05D008636 1.7e-08 63.5 63 47.6
Thhalv10017430m.g Eutrema salsugineum HOM05D006973 ORTHO05D008636 2.2e-08 63.2 62 48.4
AT2G42870 Arabidopsis thaliana HOM05D006973 ORTHO05D008636 3.8e-08 62.4 62 48.4
BcaC02g10032 Brassica carinata HOM05D006973 ORTHO05D008636 3.8e-08 62.4 63 54.0
A04p02340 Brassica napus HOM05D006973 ORTHO05D008636 3.8e-08 62.4 63 54.0
C04p33710 Brassica napus HOM05D006973 ORTHO05D008636 3.8e-08 62.4 63 54.0
BolC4t24939H Brassica oleracea HOM05D006973 ORTHO05D008636 3.8e-08 62.4 63 54.0
A05p03160 Brassica napus HOM05D006973 ORTHO05D008636 5.0e-08 62.0 66 45.5
AL4G41480 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 6.5e-08 61.6 62 46.8
AL713U10010 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 6.5e-08 61.6 62 46.8
BraA04t15963Z Brassica rapa HOM05D006973 ORTHO05D008636 8.5e-08 61.2 63 52.4
BcaB01g03419 Brassica carinata HOM05D006973 ORTHO05D008636 1.1e-07 60.8 60 46.7
Sp4g25000 Schrenkiella parvula HOM05D006973 ORTHO05D008636 1.1e-07 60.8 59 49.2
BcaC07g40229 Brassica carinata HOM05D006973 ORTHO05D008636 1.9e-07 60.1 63 54.0
Cc05_g09430 Coffea canephora HOM05D006973 ORTHO05D008636 2.5e-07 59.7 55 52.7
CARHR137940 Cardamine hirsuta HOM05D006973 ORTHO05D008636 3.2e-07 59.3 66 47.0
THA.LOC104803237 Tarenaya hassleriana HOM05D006973 ORTHO05D008636 4.2e-07 58.9 60 53.3
A09p51360 Brassica napus HOM05D006973 ORTHO05D008636 9.4e-07 57.8 63 52.4
BraA09t40577Z Brassica rapa HOM05D006973 ORTHO05D008636 9.4e-07 57.8 63 52.4
Aa31LG10G13410 Aethionema arabicum HOM05D006973 ORTHO05D008636 4.7e-06 55.5 65 47.7
SEGI_09603 Sequoiadendron giganteum HOM05D001624 ORTHO05D008636 6.1e-06 55.1 61 45.9


User provided reference genes

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