Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 1.1e-286 989.2 475 100.0
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 4.5e-264 914.1 483 91.1
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 6.1e-261 903.7 483 90.7
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 4.0e-260 901.0 479 90.0
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 2.2e-258 895.2 479 88.5
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 4.9e-258 894.0 480 89.2
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 4.9e-258 894.0 480 89.2
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 4.1e-257 891.0 480 88.3
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 7.0e-257 890.2 477 89.5
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 7.0e-257 890.2 480 88.3
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 1.2e-256 889.4 481 89.8
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 2.0e-256 888.6 474 88.6
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 3.9e-255 884.4 478 88.5
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 3.9e-255 884.4 474 88.2
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 1.9e-254 882.1 478 87.0
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 3.3e-254 881.3 477 87.2
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 3.3e-254 881.3 474 87.8
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 9.5e-254 879.8 477 88.3
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 1.6e-253 879.0 478 87.9
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 1.6e-253 879.0 478 87.2
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 3.6e-253 877.9 476 87.8
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 4.7e-253 877.5 474 87.8
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 4.7e-253 877.5 474 86.5
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 1.0e-252 876.3 477 87.0
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.0e-252 876.3 474 86.3
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 1.8e-252 875.5 479 86.8
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 3.1e-252 874.8 478 86.4
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 6.8e-252 873.6 479 86.6
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.2e-251 872.8 474 86.1
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 2.6e-251 871.7 479 86.0
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 9.8e-251 869.8 476 85.9
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 1.3e-250 869.4 478 87.4
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 1.7e-250 869.0 477 86.0
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 3.7e-250 867.8 476 85.5
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 6.4e-250 867.1 473 87.9
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 6.4e-250 867.1 479 85.4
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 6.4e-250 867.1 477 86.2
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 6.4e-250 867.1 476 86.6
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 1.1e-249 866.3 477 85.5
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 5.4e-249 864.0 483 85.1
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 7.0e-249 863.6 479 85.6
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 9.2e-249 863.2 477 85.1
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.2e-248 862.8 481 85.2
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 2.0e-248 862.1 478 85.8
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 2.7e-248 861.7 478 84.9
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 4.6e-248 860.9 457 89.3
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 6.0e-248 860.5 477 83.9
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 7.8e-248 860.1 478 85.1
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 7.8e-248 860.1 478 86.0
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 1.0e-247 859.8 477 83.9
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 2.3e-247 858.6 478 86.0
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 4.3e-246 854.4 478 86.0
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 5.6e-246 854.0 477 84.9
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 1.2e-245 852.8 493 83.0
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 1.6e-245 852.4 477 84.9
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 3.6e-245 851.3 477 84.7
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 4.7e-245 850.9 471 86.2
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 6.2e-245 850.5 478 84.3
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 8.1e-245 850.1 478 85.8
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 1.1e-244 849.7 485 83.1
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 1.4e-244 849.4 478 83.7
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 1.4e-244 849.4 478 83.9
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 2.3e-244 848.6 479 83.5
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 4.0e-244 847.8 478 83.5
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 6.8e-244 847.0 444 89.4
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 8.9e-244 846.7 473 84.4
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 8.9e-244 846.7 478 83.3
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 2.0e-243 845.5 478 84.7
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 5.8e-243 844.0 478 82.8
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 5.8e-243 844.0 478 84.9
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 7.5e-243 843.6 474 84.8
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 7.5e-243 843.6 442 88.9
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 7.5e-243 843.6 478 83.3
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 1.3e-242 842.8 477 83.6
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 1.7e-242 842.4 479 84.1
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 3.7e-242 841.3 479 83.1
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 6.4e-242 840.5 478 82.6
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 6.4e-242 840.5 486 82.1
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 8.3e-242 840.1 475 85.7
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 1.4e-241 839.3 471 84.9
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 1.9e-241 839.0 477 84.5
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 1.9e-241 839.0 478 82.8
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 3.2e-241 838.2 471 84.7
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 3.2e-241 838.2 478 83.9
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 5.4e-241 837.4 474 84.0
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 9.2e-241 836.6 480 84.2
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 1.2e-240 836.3 478 82.6
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 6.0e-240 833.9 471 83.2
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 1.0e-239 833.2 476 82.8
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 1.5e-238 829.3 478 84.3
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 1.9e-238 828.9 479 81.8
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 1.2e-237 826.2 478 82.2
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 2.1e-237 825.5 481 81.7
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 6.2e-237 823.9 480 80.8
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 9.9e-235 816.6 456 83.3
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 1.3e-234 816.2 460 82.8
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.7e-234 815.8 490 80.6
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 1.1e-230 803.1 502 78.9
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 2.9e-226 788.5 496 80.4
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 6.4e-226 787.3 474 79.7
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 1.4e-225 786.2 480 79.8
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 7.1e-225 783.9 505 78.0
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 4.6e-224 781.2 458 82.3
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 5.6e-222 774.2 476 79.2
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 2.4e-220 768.8 498 76.1
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 3.1e-220 768.5 476 79.0
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 8.1e-213 743.8 480 76.9
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 3.2e-209 731.9 383 88.5
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 4.8e-205 718.0 470 71.9
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 2.4e-204 715.7 431 78.2
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 4.5e-203 711.4 474 70.9
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 2.5e-201 705.7 471 71.3
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 7.9e-200 700.7 482 72.6
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 6.7e-191 671.0 462 71.6
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 3.4e-179 632.1 365 79.7
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 3.2e-177 625.5 366 79.2
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 2.1e-176 622.9 461 68.1
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 8.2e-173 610.9 479 64.9
SalBow6G1169 Salvia bowleyana HOM05D004186 ORTHO05D006965 1.1e-153 547.4 345 78.3
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea HOM05D004186 ORTHO05D006965 7.0e-148 528.1 281 90.0
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 2.7e-147 526.2 304 79.9
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea HOM05D004186 ORTHO05D006965 5.0e-146 521.9 275 90.2
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 1.1e-140 504.2 304 78.0
MCO08G279 Micromonas commoda HOM05D004186 ORTHO05D006965 1.3e-138 497.3 410 60.5
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 9.5e-137 491.1 463 53.3
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 4.7e-128 462.2 307 73.6
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 1.3e-125 454.1 308 71.4
TWI34G1113 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 2.2e-109 400.2 211 91.0
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 9.6e-105 384.8 254 71.7
SEGI_15575 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 5.8e-102 375.6 228 77.2
SEGI_36533 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 5.8e-102 375.6 228 77.2
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 5.4e-100 369.0 416 49.5
MD13G1264900 Malus domestica HOM05D004186 ORTHO05D006965 1.2e-94 351.3 200 85.5
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 6.4e-93 345.5 463 45.4
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 1.5e-78 297.7 427 43.3
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 4.3e-73 279.6 147 83.7
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 1.5e-70 271.2 184 70.1
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 1.0e-69 268.5 184 69.6
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 3.9e-66 256.5 170 70.6
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 2.0e-65 254.2 170 70.0
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 5.2e-50 203.0 110 83.6
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 5.2e-50 203.0 110 83.6
A02p08340 Brassica napus HOM05D004186 ORTHO05D006965 5.3e-47 193.0 111 82.0
FAN17G2491 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.2e-38 165.2 95 89.5
HanXRQChr09g0269751 Helianthus annuus HOM05D004186 ORTHO05D015971 2.9e-37 160.6 97 76.3
SMO181G0029 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 5.0e-37 159.8 105 70.5
RcHm_v2.0_Chr5g0046871 Rosa chinensis HOM05D004186 ORTHO05D015971 6.3e-32 142.9 81 79.0
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 5.0e-29 133.3 91 69.2
RcHm_v2.0_Chr5g0036521 Rosa chinensis HOM05D004186 ORTHO05D015971 3.3e-28 130.6 77 79.2
Zm00001eb265380 Zea mays HOM05D004186 ORTHO05D008381 3.0e-21 107.5 56 85.7
Ah.08g214930 Amaranthus hybridus HOM05D004186 ORTHO05D061406 5.0e-21 106.7 135 41.5
Zm00001eb101000 Zea mays HOM05D004186 ORTHO05D000030 2.8e-19 100.9 65 67.7
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 2.6e-17 94.4 72 68.1
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 2.6e-17 94.4 72 68.1
SalBow7G3706 Salvia bowleyana HOM05D004186 ORTHO05D352404 9.2e-15 85.9 72 66.7
Sc14g0005990 Simmondsia chinensis HOM05D004186 ORTHO05D039000 9.2e-15 85.9 45 84.4
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 1.2e-14 85.5 75 52.0
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 2.3e-13 81.3 46 80.4
EL10Ac2g04384 Beta vulgaris HOM05D004186 ORTHO05D039000 1.1e-10 72.4 34 91.2
Lsat_1_v5_gn_9_37000 Lactuca sativa HOM05D004186 ORTHO05D011383 9.9e-09 65.9 58 56.9
SGA_v2.0_scaffold66G22476 Striga asiatica HOM05D004186 ORTHO05D405288 8.3e-08 62.8 34 85.3
HanXRQChr10g0284771 Helianthus annuus HOM05D004748 ORTHO05D005825 2.4e-07 61.2 35 80.0
C07p46470 Brassica napus HOM05D001159 ORTHO05D011383 7.1e-07 59.7 55 50.9
C08p17140 Brassica napus HOM05D004186 ORTHO05D011383 9.2e-07 59.3 55 49.1
BolC8t49341H Brassica oleracea HOM05D004186 ORTHO05D011383 9.2e-07 59.3 55 49.1
BcaC07g38783 Brassica carinata HOM05D002592 ORTHO05D011383 4.6e-06 57.0 45 55.6


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