Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 3.6e-285 984.2 483 100.0
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 7.6e-259 896.7 483 91.1
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 1.3e-258 896.0 483 90.3
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 5.5e-257 890.6 483 90.1
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 3.3e-254 881.3 483 89.2
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 1.3e-247 859.4 483 86.1
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 4.8e-245 850.9 483 84.9
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 2.6e-243 845.1 483 84.7
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 5.5e-241 837.4 482 83.6
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 9.4e-241 836.6 483 84.5
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 1.2e-240 836.3 483 83.4
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 6.1e-240 833.9 483 83.6
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 1.0e-239 833.2 488 83.6
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 5.1e-239 830.9 482 83.8
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 1.1e-238 829.7 482 84.0
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 3.3e-238 828.2 482 83.6
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 9.7e-238 826.6 483 83.4
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 1.7e-237 825.9 482 83.4
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 4.8e-237 824.3 484 84.5
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.1e-236 823.2 483 83.0
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.4e-236 822.8 483 83.0
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.4e-236 822.8 483 83.0
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 1.4e-236 822.8 484 84.1
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 2.4e-236 822.0 483 83.2
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 4.1e-236 821.2 482 83.2
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 4.1e-236 821.2 483 82.2
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 4.1e-236 821.2 483 82.8
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 6.9e-236 820.5 483 82.8
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 6.9e-236 820.5 483 82.6
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 1.2e-235 819.7 484 82.6
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.5e-235 819.3 483 82.8
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 2.0e-235 818.9 485 83.1
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 2.6e-235 818.5 483 83.2
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 3.4e-235 818.1 482 82.2
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 4.5e-235 817.8 484 83.7
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 4.5e-235 817.8 484 83.1
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 1.0e-234 816.6 484 81.6
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 2.9e-234 815.1 483 82.4
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 6.5e-234 813.9 483 81.4
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 8.5e-234 813.5 483 81.2
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 8.5e-234 813.5 484 82.6
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 1.4e-233 812.8 483 81.8
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 1.4e-233 812.8 483 82.4
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.9e-233 812.4 483 82.0
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.5e-233 812.0 483 82.0
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 3.2e-233 811.6 483 82.0
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 4.2e-233 811.2 483 82.0
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.5e-233 810.8 483 82.0
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 7.2e-233 810.4 483 81.8
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 7.2e-233 810.4 483 81.4
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 9.4e-233 810.1 484 81.6
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 8.0e-232 807.0 483 82.0
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 8.0e-232 807.0 483 81.4
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 8.8e-231 803.5 489 80.0
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 2.0e-230 802.4 489 80.0
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 1.7e-229 799.3 484 81.6
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 2.8e-229 798.5 483 82.0
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 8.2e-229 797.0 485 81.4
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 4.1e-228 794.7 485 80.4
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 7.0e-228 793.9 488 80.5
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 3.5e-227 791.6 483 80.1
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 7.7e-227 790.4 483 80.5
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.1e-225 786.6 483 80.3
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 4.2e-225 784.6 483 80.1
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 9.4e-225 783.5 481 80.0
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 1.6e-224 782.7 481 80.2
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 1.6e-224 782.7 514 76.1
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 3.6e-224 781.6 417 88.7
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.7e-224 781.2 485 79.2
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 3.0e-223 778.5 489 78.9
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 4.4e-222 774.6 486 78.4
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 4.4e-222 774.6 481 78.2
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 4.4e-222 774.6 484 79.3
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 4.4e-222 774.6 484 78.1
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.4e-222 774.6 485 78.8
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 5.7e-222 774.2 484 78.5
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 7.5e-222 773.9 484 78.9
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 9.7e-222 773.5 486 79.0
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.3e-221 773.1 483 78.3
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.3e-221 773.1 485 79.0
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 2.8e-221 771.9 484 78.5
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 2.4e-220 768.8 484 78.3
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 9.1e-220 766.9 484 78.3
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 3.5e-219 765.0 484 77.9
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 5.0e-218 761.1 484 77.5
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 6.5e-218 760.8 485 77.9
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 6.5e-218 760.8 485 77.9
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.1e-217 760.0 487 78.4
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 1.9e-217 759.2 482 76.8
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 1.0e-215 753.4 484 77.9
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 9.8e-214 746.9 484 76.9
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 9.8e-214 746.9 481 77.1
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 9.8e-214 746.9 481 76.9
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 2.8e-213 745.3 393 89.6
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 4.8e-213 744.6 396 88.9
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 4.8e-213 744.6 482 76.3
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 1.1e-212 743.4 481 76.9
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 1.7e-210 736.1 393 88.8
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 5.9e-203 711.1 444 77.9
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.1e-201 706.8 444 78.6
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 1.0e-194 683.7 482 71.8
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 1.5e-193 679.9 398 79.6
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 2.5e-193 679.1 434 73.5
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 1.1e-191 673.7 420 76.0
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 1.2e-190 670.2 383 84.6
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 1.3e-189 666.8 441 73.7
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 7.0e-188 661.0 389 78.9
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 2.5e-177 625.9 404 72.8
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.4e-175 620.2 432 72.7
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 5.4e-172 608.2 483 66.0
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 1.3e-165 587.0 389 67.9
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 4.6e-163 578.6 391 66.5
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 1.7e-157 560.1 289 92.4
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.4e-156 556.2 289 91.3
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 7.4e-145 518.1 343 74.9
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 2.0e-134 483.4 295 76.9
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.1e-107 393.7 257 74.3
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.1e-103 379.4 237 77.6
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 5.2e-82 309.3 172 84.3
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.3e-61 240.7 196 61.7
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 1.6e-59 234.6 130 85.4
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.1e-59 234.2 135 82.2
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 7.6e-57 225.7 139 76.3
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 2.2e-48 197.6 140 71.4
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 2.9e-48 197.2 158 65.2
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 3.3e-36 157.1 94 80.9
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 9.3e-31 139.0 105 62.9
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 3.0e-13 80.9 59 66.1
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 4.3e-12 77.0 284 27.5
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 1.1e-07 62.4 155 28.4
Sopen08g030690 Solanum pennellii HOM05D000776 ORTHO05D001624 1.4e-07 62.0 279 25.1
Solyc08g082440.3 Solanum lycopersicum HOM05D000776 ORTHO05D001624 1.9e-07 61.6 279 24.7
HanXRQChr10g0316991 Helianthus annuus HOM05D000776 ORTHO05D001624 4.2e-07 60.5 130 29.2
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 7.2e-07 59.7 128 32.0
Ciclev10001690m.g Citrus clementina HOM05D000776 ORTHO05D001624 1.2e-06 58.9 279 25.4
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 1.2e-06 58.9 154 26.0
CiPaw.11G120200 Carya illinoinensis HOM05D000776 ORTHO05D001624 1.6e-06 58.5 128 28.1
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 6.1e-06 56.6 136 30.9
Lalb_Chr09g0320631 Lupinus albus HOM05D000776 ORTHO05D001624 7.9e-06 56.2 153 30.1


User provided reference genes

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