Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.3e-128 463.0 229 100.0
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.3e-118 429.9 212 100.0
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 4.6e-105 384.8 213 89.7
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 6.7e-104 380.9 224 84.8
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 7.4e-103 377.5 212 87.7
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 3.7e-102 375.2 212 87.7
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 9.0e-101 370.5 220 80.5
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 2.6e-100 369.0 212 85.8
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 4.5e-100 368.2 215 83.7
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.0e-99 367.1 215 82.3
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.4e-98 363.2 209 88.0
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.3e-96 356.7 209 84.2
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 1.8e-96 356.3 212 83.5
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 2.3e-96 355.9 209 83.7
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 3.0e-96 355.5 209 84.2
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 6.7e-96 354.4 210 81.9
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.1e-95 353.6 209 81.8
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 5.7e-95 351.3 225 76.0
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 5.7e-95 351.3 224 78.6
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 7.4e-95 350.9 210 79.5
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 7.4e-95 350.9 209 83.7
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 9.7e-95 350.5 209 81.3
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.3e-94 350.1 209 83.3
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 1.3e-94 350.1 210 81.9
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.3e-94 350.1 209 80.9
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 1.6e-94 349.7 212 82.1
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 2.8e-94 349.0 210 80.5
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 3.7e-94 348.6 212 81.1
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 1.1e-93 347.1 209 81.3
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.4e-93 346.7 212 80.2
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 1.8e-93 346.3 212 80.2
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.8e-93 346.3 212 80.2
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 2.4e-93 345.9 210 79.5
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 2.4e-93 345.9 209 80.4
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 2.4e-93 345.9 226 77.0
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 3.1e-93 345.5 209 79.9
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 4.1e-93 345.1 212 79.7
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 5.3e-93 344.7 209 81.3
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 9.0e-93 344.0 212 77.8
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 9.0e-93 344.0 210 80.5
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 1.2e-92 343.6 211 81.0
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.2e-92 343.6 208 81.7
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 1.2e-92 343.6 213 80.8
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 1.5e-92 343.2 209 80.4
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.5e-92 343.2 200 87.5
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 3.4e-92 342.0 213 78.9
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 3.4e-92 342.0 212 79.7
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 4.5e-92 341.7 219 77.6
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 5.9e-92 341.3 214 77.1
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 7.7e-92 340.9 212 78.8
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.2e-91 339.3 215 77.2
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 2.9e-91 339.0 212 78.8
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 3.8e-91 338.6 208 79.8
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 6.5e-91 337.8 212 77.8
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 6.5e-91 337.8 212 76.9
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 8.5e-91 337.4 209 78.9
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.1e-90 337.0 209 77.5
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 1.1e-90 337.0 208 79.3
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.4e-90 336.7 215 76.7
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.4e-90 336.7 209 78.9
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.4e-90 336.7 212 78.3
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 1.9e-90 336.3 213 78.4
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 2.5e-90 335.9 209 77.5
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 2.5e-90 335.9 223 74.9
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 3.2e-90 335.5 212 78.3
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 4.2e-90 335.1 208 79.3
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 9.4e-90 334.0 209 81.3
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 9.4e-90 334.0 224 75.9
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.6e-89 333.2 209 76.1
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 7.9e-89 330.9 235 72.8
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.0e-88 330.5 220 74.1
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 1.8e-88 329.7 209 76.6
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.0e-88 328.9 236 72.0
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 5.1e-88 328.2 212 75.5
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 6.7e-88 327.8 219 74.4
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 8.8e-88 327.4 198 79.8
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 8.8e-88 327.4 224 72.8
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 2.5e-87 325.9 219 73.1
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 4.3e-87 325.1 224 73.7
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 5.7e-87 324.7 219 73.5
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 5.7e-87 324.7 215 73.5
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 7.4e-87 324.3 216 74.1
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 2.2e-86 322.8 221 72.4
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 4.8e-86 321.6 218 72.5
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 6.3e-86 321.2 218 72.9
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 1.1e-85 320.5 221 71.9
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 1.8e-85 319.7 208 71.6
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 3.1e-85 318.9 281 60.5
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 4.1e-85 318.5 221 71.5
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 4.1e-85 318.5 221 71.5
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 6.9e-85 317.8 221 71.5
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 1.5e-84 316.6 194 79.4
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 3.4e-84 315.5 218 71.1
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 4.5e-84 315.1 214 72.9
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 7.7e-84 314.3 221 71.0
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 1.7e-83 313.2 214 72.4
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 6.5e-83 311.2 208 76.0
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 1.1e-82 310.5 218 67.9
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 2.7e-81 305.8 211 73.5
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 7.9e-81 304.3 202 72.3
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 4.4e-79 298.5 211 71.6
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 5.3e-77 291.6 167 88.0
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 7.4e-71 271.2 227 62.6
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 2.6e-68 262.7 175 74.9
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 2.6e-63 246.1 285 51.6
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 8.5e-59 231.1 212 54.7
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.3e-54 217.2 135 77.8
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.1e-53 214.2 211 53.1
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.6e-52 210.3 137 78.8
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 2.7e-52 209.5 217 50.7
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.8e-49 199.5 116 80.2
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.5e-47 193.7 146 67.1
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 7.5e-47 191.4 146 66.4
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.1e-45 187.6 146 65.1
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.3e-43 180.6 208 49.0
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 1.9e-42 176.8 118 78.0
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.2e-38 163.3 176 51.7
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 2.9e-38 162.9 96 82.3
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 4.6e-36 155.6 121 64.5
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 8.0e-33 144.8 95 75.8
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 5.8e-31 138.7 79 82.3
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.9e-30 136.3 75 81.3
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 2.1e-17 93.6 47 87.2
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.3e-14 84.3 52 76.9
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.9e-13 80.5 67 53.7
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 7.8e-12 75.1 115 42.6
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 6.6e-11 72.0 115 41.7
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 8.1e-09 65.1 154 29.9


User provided reference genes

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