Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 5.1e-79 297.7 158 100.0
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 2.3e-55 219.2 158 75.9
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 1.4e-52 209.9 160 70.6
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 2.1e-48 196.1 160 67.5
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 4.0e-47 191.8 162 64.8
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 5.7e-46 188.0 157 65.0
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 1.4e-44 183.3 167 64.7
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 1.4e-44 183.3 160 61.9
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.4e-44 183.3 162 65.4
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 2.4e-44 182.6 119 78.2
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 1.2e-43 180.3 197 51.3
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 3.5e-43 178.7 195 53.8
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 3.5e-43 178.7 138 72.5
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 1.0e-42 177.2 195 52.3
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 5.0e-42 174.9 161 61.5
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 6.5e-42 174.5 189 55.6
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 8.5e-42 174.1 199 50.3
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 1.9e-41 172.9 200 52.5
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.2e-41 172.2 194 54.1
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 4.2e-41 171.8 201 48.8
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 1.6e-40 169.9 192 54.7
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 2.1e-40 169.5 198 49.0
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 2.1e-40 169.5 197 53.8
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 2.1e-40 169.5 199 47.7
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 2.1e-40 169.5 135 65.9
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 8.0e-40 167.5 193 50.8
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 8.0e-40 167.5 198 49.5
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 1.4e-39 166.8 194 50.5
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 1.8e-39 166.4 161 57.8
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 3.0e-39 165.6 99 81.8
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 3.0e-39 165.6 197 51.8
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 5.2e-39 164.9 135 64.4
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 5.2e-39 164.9 196 52.0
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 5.2e-39 164.9 197 50.8
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 5.2e-39 164.9 156 64.1
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 6.8e-39 164.5 194 53.1
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 8.8e-39 164.1 191 49.2
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 8.8e-39 164.1 144 63.2
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 8.8e-39 164.1 144 63.2
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 2.0e-38 162.9 194 50.0
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 4.4e-38 161.8 163 55.2
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 5.7e-38 161.4 197 49.7
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 7.5e-38 161.0 187 51.3
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 7.5e-38 161.0 198 47.5
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.7e-37 159.8 166 54.8
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 2.2e-37 159.5 201 48.8
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 2.8e-37 159.1 213 49.3
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 2.8e-37 159.1 195 49.2
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 4.9e-37 158.3 159 57.9
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 6.3e-37 157.9 198 47.0
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 8.3e-37 157.5 200 47.0
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.1e-36 157.1 229 44.1
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 1.1e-36 157.1 235 41.3
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 1.4e-36 156.8 166 53.0
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 1.4e-36 156.8 197 49.2
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 1.4e-36 156.8 144 60.4
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 1.8e-36 156.4 123 68.3
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.4e-36 156.0 134 62.7
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 3.1e-36 155.6 159 55.3
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 5.4e-36 154.8 158 58.2
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 2.0e-35 152.9 131 62.6
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 2.0e-35 152.9 202 50.5
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 2.7e-35 152.5 119 63.0
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 4.5e-35 151.8 202 50.5
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.3e-34 149.4 131 61.8
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.9e-34 149.1 232 42.7
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 5.0e-34 148.3 157 56.7
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 8.6e-34 147.5 197 46.2
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 2.8e-32 142.5 194 46.4
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 1.0e-31 140.6 168 51.2
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 8.9e-31 137.5 195 46.7
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 1.5e-30 136.7 158 53.8
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 2.6e-30 136.0 120 59.2
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 2.6e-30 136.0 196 47.4
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 3.2e-28 129.0 195 44.6
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 4.1e-28 128.6 144 54.2
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 9.2e-28 127.5 124 53.2
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 9.2e-28 127.5 152 48.7
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 3.5e-27 125.6 193 45.6
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 5.9e-27 124.8 98 64.3
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 1.3e-26 123.6 129 51.2
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.5e-25 120.2 197 42.6
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 9.5e-25 117.5 148 48.0
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 2.8e-24 115.9 158 48.7
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 3.6e-24 115.5 147 46.3
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 1.4e-23 113.6 130 47.7
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 1.8e-23 113.2 147 45.6
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 4.0e-23 112.1 119 51.3
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 8.9e-23 110.9 131 52.7
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 8.9e-23 110.9 131 52.7
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.2e-22 110.5 133 48.9
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 1.2e-22 110.5 170 43.5
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 1.5e-22 110.2 119 53.8
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 1.5e-22 110.2 131 51.9
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 1.5e-22 110.2 119 53.8
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 3.4e-22 109.0 132 48.5
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 5.8e-22 108.2 134 48.5
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 4.9e-21 105.1 120 50.0
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 2.3e-18 96.3 110 50.9
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 9.5e-17 90.9 119 45.4
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 2.4e-12 76.3 177 32.8
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 3.2e-12 75.9 160 41.2
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 5.4e-12 75.1 168 36.3
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 7.8e-11 71.2 130 43.8
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 3.0e-10 69.3 148 33.8
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 2.8e-08 62.8 132 33.3


User provided reference genes

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