Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 0.0e+00 1100.9 563 100.0
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 1.8e-227 792.7 601 71.0
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.2e-226 790.0 626 67.3
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 9.9e-226 786.9 619 68.5
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 6.7e-198 694.5 599 60.6
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 5.3e-179 631.7 620 55.3
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 3.5e-178 629.0 613 55.8
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.9e-176 623.2 672 53.3
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 5.5e-176 621.7 661 53.6
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 7.2e-176 621.3 608 54.9
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 9.4e-176 620.9 578 57.1
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 1.2e-175 620.5 613 55.3
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 1.6e-175 620.2 594 56.4
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 1.8e-174 616.7 597 55.8
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.8e-174 616.7 598 56.9
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 2.8e-172 609.4 609 54.2
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 1.6e-170 603.6 598 54.5
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 4.5e-170 602.1 590 54.9
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 3.8e-169 599.0 580 55.5
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 8.5e-169 597.8 604 55.3
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 1.9e-168 596.7 598 53.8
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 7.2e-168 594.7 599 54.1
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 7.2e-168 594.7 594 52.2
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 3.6e-167 592.4 586 54.9
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 1.8e-166 590.1 619 52.2
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 2.3e-166 589.7 613 52.4
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 2.0e-165 586.6 618 51.9
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 7.5e-165 584.7 594 52.0
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 2.8e-164 582.8 592 53.5
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.8e-163 580.1 623 51.5
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 2.4e-163 579.7 618 51.5
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 5.9e-162 575.1 592 53.0
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 5.9e-162 575.1 592 53.4
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 1.7e-161 573.5 605 52.1
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 1.9e-160 570.1 592 52.5
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 1.9e-160 570.1 594 51.9
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 2.5e-160 569.7 586 53.9
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 3.3e-160 569.3 607 51.4
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 3.3e-160 569.3 601 51.6
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 4.2e-160 568.9 593 51.8
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 4.7e-159 565.5 607 51.1
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.7e-159 565.5 593 52.1
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.2e-155 552.7 593 51.1
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 9.2e-155 551.2 588 51.0
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 1.6e-154 550.4 587 52.5
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.7e-153 547.0 596 49.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 6.1e-151 538.5 628 49.0
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 1.4e-150 537.3 665 46.3
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 8.9e-150 534.6 593 52.1
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 6.4e-148 528.5 593 48.9
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 1.2e-146 524.2 598 48.0
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 1.2e-146 524.2 648 47.4
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 1.6e-146 523.9 601 49.8
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 2.0e-146 523.5 610 47.9
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 2.0e-146 523.5 592 49.8
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 4.6e-146 522.3 599 50.6
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 2.5e-144 516.5 573 50.3
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 7.3e-144 515.0 601 49.4
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 1.2e-143 514.2 589 50.6
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 8.0e-143 511.5 661 43.1
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 3.4e-141 506.1 594 48.8
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 6.4e-140 501.9 599 47.1
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 3.5e-138 496.1 566 50.0
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.4e-126 457.6 523 48.8
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.5e-125 454.1 432 58.1
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 2.6e-125 453.4 649 43.0
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 1.7e-121 440.7 602 42.0
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 1.1e-120 438.0 598 45.0
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 4.3e-120 436.0 552 44.4
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 9.6e-120 434.9 540 45.4
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 4.0e-118 429.5 596 43.5
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 4.4e-117 426.0 598 42.6
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 7.6e-117 425.2 598 42.6
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 1.7e-116 424.1 599 43.2
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 8.4e-116 421.8 405 57.8
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 2.7e-114 416.8 477 47.8
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.3e-111 407.9 599 44.7
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 4.5e-109 399.4 609 39.6
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 5.8e-109 399.1 607 40.9
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.3e-108 397.9 607 42.5
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 1.7e-108 397.5 606 40.4
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 9.3e-107 391.7 618 40.1
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.5e-106 389.8 327 61.8
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.8e-105 387.5 525 43.6
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.8e-105 387.5 599 38.1
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 2.3e-105 387.1 613 40.0
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.5e-104 383.6 327 61.2
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.0e-102 376.3 327 59.9
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 7.6e-101 372.1 504 44.2
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 4.2e-99 366.3 606 38.1
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 1.5e-96 357.8 494 42.9
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 1.5e-96 357.8 610 35.6
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 3.3e-96 356.7 328 57.0
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.9e-92 343.6 327 56.0
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 3.2e-91 340.1 426 45.5
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 2.1e-90 337.4 598 37.5
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.5e-90 336.7 539 40.4
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 4.1e-86 323.2 549 38.3
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 2.4e-78 297.4 270 57.0
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 3.3e-64 250.4 445 36.0
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.6e-53 214.9 457 35.4
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.1e-50 204.5 288 43.4
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 9.5e-43 179.1 148 57.4
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 7.5e-40 169.5 555 28.8
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 1.1e-38 165.6 204 44.1
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 4.3e-35 153.7 169 50.3
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 2.8e-34 151.0 347 31.4
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.8e-33 148.3 141 53.2
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.6e-32 144.4 91 75.8
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 3.2e-30 137.5 555 25.4
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 5.4e-30 136.7 238 34.9
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 2.0e-24 118.2 649 22.7
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 7.5e-24 116.3 96 58.3
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 2.7e-21 107.8 263 29.3
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 2.4e-14 84.7 75 57.3
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 2.5e-11 74.7 250 25.2
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 8.1e-10 69.7 56 55.4
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.4e-09 68.9 62 53.2
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 5.2e-09 67.0 67 49.3
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.0e-08 65.1 55 54.5
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 3.8e-07 60.8 51 56.9
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 2.4e-06 58.2 73 43.8
FvH4_6g18901 Fragaria vesca HOM05D006351 ORTHO05D007796 7.1e-06 56.6 106 35.8


User provided reference genes

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