Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.2e-45 185.3 93 100.0
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.2e-45 185.3 93 100.0
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 2.3e-42 175.3 93 93.5
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 3.9e-42 174.5 93 94.6
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.1e-41 172.9 93 89.2
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 7.3e-41 170.2 93 91.4
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.2e-40 169.5 90 91.1
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 2.1e-40 168.7 93 88.2
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 3.6e-40 167.9 93 89.2
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 3.6e-40 167.9 93 89.2
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 4.7e-40 167.5 93 87.1
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 6.2e-40 167.2 92 89.1
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 8.0e-40 166.8 93 89.2
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 1.4e-39 166.0 93 84.9
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.4e-39 166.0 92 85.9
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 1.8e-39 165.6 93 88.2
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 3.1e-39 164.9 93 86.0
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 3.1e-39 164.9 93 87.1
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.0e-39 164.5 93 87.1
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.0e-39 164.5 93 87.1
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 4.0e-39 164.5 93 87.1
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 4.0e-39 164.5 93 87.1
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 5.2e-39 164.1 93 83.9
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 5.2e-39 164.1 93 86.0
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 8.9e-39 163.3 93 87.1
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 8.9e-39 163.3 93 87.1
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 8.9e-39 163.3 92 85.9
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 8.9e-39 163.3 93 88.2
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 1.2e-38 162.9 93 86.0
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 1.2e-38 162.9 92 87.0
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 1.5e-38 162.5 93 86.0
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.5e-38 162.5 93 88.2
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.5e-38 162.5 93 86.0
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.5e-38 162.5 93 86.0
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 2.0e-38 162.2 93 83.9
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 2.6e-38 161.8 93 86.0
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 2.6e-38 161.8 93 86.0
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 3.4e-38 161.4 93 83.9
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 3.4e-38 161.4 93 86.0
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 3.4e-38 161.4 88 86.4
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 3.4e-38 161.4 92 84.8
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 3.4e-38 161.4 93 83.9
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 4.4e-38 161.0 93 84.9
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 4.4e-38 161.0 93 83.9
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 5.8e-38 160.6 93 84.9
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.8e-38 160.6 92 85.9
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 7.5e-38 160.2 89 86.5
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 9.8e-38 159.8 93 84.9
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 9.8e-38 159.8 93 84.9
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 9.8e-38 159.8 93 83.9
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 9.8e-38 159.8 93 83.9
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 1.3e-37 159.5 92 83.7
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.7e-37 159.1 93 82.8
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 2.2e-37 158.7 93 82.8
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 2.2e-37 158.7 92 84.8
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.2e-37 158.7 90 84.4
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 3.7e-37 157.9 93 83.9
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.7e-37 157.9 93 80.6
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 3.7e-37 157.9 93 80.6
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 4.9e-37 157.5 93 82.8
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 6.4e-37 157.1 93 81.7
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 6.4e-37 157.1 93 79.6
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 6.4e-37 157.1 93 81.7
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 6.4e-37 157.1 93 80.6
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 8.3e-37 156.8 93 84.9
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.4e-36 156.0 93 80.6
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 1.4e-36 156.0 93 81.7
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 1.9e-36 155.6 93 80.6
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 2.4e-36 155.2 93 82.8
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 3.2e-36 154.8 93 81.7
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 4.1e-36 154.5 93 81.7
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 4.1e-36 154.5 93 78.5
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.2e-35 152.9 93 80.6
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 2.0e-35 152.1 92 82.6
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 2.7e-35 151.8 93 80.6
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 3.5e-35 151.4 93 79.6
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 4.6e-35 151.0 93 75.3
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 4.6e-35 151.0 92 78.3
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 6.0e-35 150.6 91 82.4
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 7.8e-35 150.2 93 77.4
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 1.7e-34 149.1 93 80.6
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 2.3e-34 148.7 93 76.3
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 2.3e-34 148.7 93 76.3
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 2.3e-34 148.7 89 80.9
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 3.0e-34 148.3 93 76.3
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 3.9e-34 147.9 93 74.2
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 5.0e-34 147.5 93 74.2
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 6.6e-34 147.1 93 76.3
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 8.6e-34 146.7 93 75.3
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 3.3e-33 144.8 93 75.3
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 3.3e-33 144.8 93 73.1
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 7.3e-33 143.7 93 73.1
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.2e-32 142.9 94 75.5
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 1.2e-32 142.9 93 73.1
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 1.6e-32 142.5 91 78.0
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.7e-32 141.0 80 83.8
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.7e-32 141.0 80 83.8
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.1e-31 139.8 93 73.1
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.8e-31 139.0 93 74.2
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 3.1e-31 138.3 93 74.2
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.1e-31 138.3 85 78.8
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 5.8e-30 134.0 90 72.2
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 1.3e-29 132.9 93 73.1
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 1.3e-29 132.9 93 73.1
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.1e-28 129.8 90 68.9
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 3.2e-28 128.3 90 70.0
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 5.4e-28 127.5 88 69.3
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 7.1e-28 127.1 78 74.4
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 7.1e-28 127.1 89 69.7
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 1.3e-26 122.9 88 70.5
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 3.1e-23 111.7 89 61.8
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 2.9e-21 105.1 88 55.7
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 3.6e-16 88.2 93 45.2
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 4.2e-12 74.7 53 69.8
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 5.4e-12 74.3 59 55.9
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 1.1e-09 66.6 37 89.2
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 3.6e-08 61.6 43 69.8
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 1.4e-07 59.7 32 93.8
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 1.4e-07 59.7 32 87.5


User provided reference genes

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