Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 9.2e-170 600.1 300 100.0
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 7.6e-132 474.2 302 79.8
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 5.4e-130 468.0 303 78.5
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 1.9e-127 459.5 300 77.7
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.1e-125 453.8 283 82.0
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.8e-125 453.0 293 77.1
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.6e-124 449.1 299 74.2
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 7.1e-122 441.0 285 76.1
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 2.1e-121 439.5 305 73.8
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 7.9e-121 437.6 296 75.3
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 4.3e-119 431.8 282 75.2
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 3.1e-117 425.6 277 75.1
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 3.1e-117 425.6 305 71.8
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 1.5e-116 423.3 302 71.2
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.7e-115 419.9 296 71.3
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 2.2e-115 419.5 303 70.0
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 5.5e-114 414.8 282 73.8
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 9.3e-114 414.1 299 71.6
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 1.6e-113 413.3 283 71.4
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 3.3e-111 405.6 297 68.4
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 3.3e-111 405.6 291 70.4
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 5.7e-111 404.8 258 76.0
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 5.7e-111 404.8 298 69.1
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 9.6e-111 404.1 298 70.8
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.3e-110 403.7 258 75.2
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.3e-110 403.7 258 75.2
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 1.3e-110 403.7 258 75.2
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 2.1e-110 402.9 261 75.1
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.8e-110 402.5 297 67.3
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 2.8e-110 402.5 290 71.0
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 3.7e-110 402.1 302 67.5
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 6.3e-110 401.4 296 68.2
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 6.3e-110 401.4 298 68.8
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 6.3e-110 401.4 290 69.7
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 6.3e-110 401.4 303 70.0
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.1e-109 400.6 296 68.2
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 2.4e-109 399.4 308 69.5
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 2.4e-109 399.4 309 65.4
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 3.1e-109 399.1 300 69.3
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 4.1e-109 398.7 296 67.6
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 4.1e-109 398.7 302 70.5
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 1.5e-108 396.7 291 69.4
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 4.5e-108 395.2 267 72.7
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 1.7e-107 393.3 249 77.1
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 3.2e-106 389.0 237 78.9
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 4.2e-106 388.7 245 76.3
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 2.1e-105 386.3 297 66.0
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 1.3e-104 383.6 292 65.4
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.8e-104 383.3 295 66.1
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 2.3e-104 382.9 295 66.4
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 6.7e-104 381.3 290 66.2
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.1e-103 380.6 280 66.8
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 1.5e-103 380.2 289 67.1
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 1.5e-103 380.2 289 67.1
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 3.3e-103 379.0 251 72.9
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.6e-102 376.7 250 71.2
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 4.8e-102 375.2 268 69.8
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 8.2e-102 374.4 241 75.1
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 8.2e-102 374.4 241 75.1
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 8.2e-102 374.4 241 75.1
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 3.1e-101 372.5 246 72.8
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 4.1e-101 372.1 246 72.8
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 2.0e-100 369.8 295 64.7
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 3.4e-100 369.0 218 80.7
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 1.3e-99 367.1 293 64.5
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 1.7e-99 366.7 301 62.1
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 3.8e-99 365.5 298 62.8
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 6.5e-99 364.8 307 60.9
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 1.9e-98 363.2 294 64.3
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 7.2e-98 361.3 246 72.0
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.2e-97 360.5 246 71.5
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.1e-97 359.8 297 60.9
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 4.6e-97 358.6 246 72.0
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.4e-96 357.1 239 70.7
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 6.7e-96 354.8 240 70.8
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.1e-95 354.0 307 60.3
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 2.5e-95 352.8 300 59.7
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 5.7e-95 351.7 240 70.4
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 3.7e-94 349.0 297 60.9
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 3.7e-94 349.0 241 69.3
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 8.2e-94 347.8 365 53.7
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 5.0e-91 338.6 231 71.4
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 5.0e-91 338.6 238 68.9
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 6.5e-91 338.2 241 66.8
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 8.5e-91 337.8 251 66.5
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.1e-89 333.2 268 65.3
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 4.7e-89 332.0 264 65.5
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 6.7e-88 328.2 252 63.9
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 1.1e-85 320.9 277 61.4
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 1.4e-85 320.5 291 57.7
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 4.1e-85 318.9 295 59.7
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 3.5e-84 315.8 232 69.4
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 5.5e-82 308.5 244 66.0
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.0e-79 300.1 264 61.7
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 4.4e-79 298.9 264 61.7
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 2.4e-77 293.1 182 75.8
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 5.0e-75 285.4 267 61.4
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.5e-74 283.9 158 86.1
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.6e-73 280.4 323 48.0
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.3e-70 270.8 215 59.5
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 6.3e-70 268.5 197 68.5
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.4e-69 267.3 276 52.5
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 2.7e-65 253.1 214 57.5
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 6.1e-57 225.3 174 64.4
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.0e-43 181.4 101 79.2
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 1.1e-42 177.9 130 63.8
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 9.2e-37 158.3 107 72.0
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 4.3e-34 149.4 213 39.4
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 1.9e-26 124.0 196 36.2
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.4e-13 81.3 56 78.6
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 2.5e-10 70.5 101 39.6


User provided reference genes

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