Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 7.5e-275 949.9 478 100.0
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 9.2e-273 943.0 478 99.2
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 3.0e-215 751.9 460 81.5
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.1e-212 741.5 471 79.2
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 1.5e-206 723.0 451 79.8
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 2.1e-192 676.0 461 71.8
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 1.3e-189 666.8 454 72.0
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 1.4e-188 663.3 461 70.5
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 9.1e-188 660.6 477 70.9
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 7.7e-187 657.5 456 71.7
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 2.9e-186 655.6 430 74.0
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 2.1e-184 649.4 446 72.4
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 2.8e-181 639.0 456 69.7
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 8.3e-181 637.5 445 70.6
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 2.4e-180 636.0 458 70.3
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 5.4e-180 634.8 486 66.3
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 7.0e-180 634.4 445 70.1
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 9.1e-180 634.0 461 70.1
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 1.7e-178 629.8 461 69.0
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 2.2e-178 629.4 432 72.5
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 1.9e-177 626.3 444 69.4
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 2.5e-177 625.9 439 70.4
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 3.2e-177 625.5 439 70.6
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 3.6e-176 622.1 461 66.4
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 1.8e-175 619.8 441 68.9
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 3.0e-175 619.0 461 68.1
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 6.8e-175 617.8 436 69.3
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 2.0e-174 616.3 444 69.1
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 4.9e-173 611.7 444 68.7
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 5.4e-172 608.2 451 66.3
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 5.4e-172 608.2 460 66.1
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 1.2e-171 607.1 399 75.4
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.7e-171 605.9 449 67.0
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.3e-170 602.8 441 68.3
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 3.8e-170 602.1 451 66.5
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 6.6e-170 601.3 445 68.3
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 6.6e-170 601.3 444 65.5
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 8.6e-170 600.9 450 66.9
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.1e-169 600.5 469 68.4
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 1.9e-169 599.7 433 66.7
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 9.5e-169 597.4 461 66.8
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.6e-168 596.7 474 65.6
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 3.6e-168 595.5 430 66.3
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 1.0e-167 594.0 441 64.9
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 1.8e-167 593.2 430 65.3
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 2.3e-167 592.8 460 62.6
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.0e-167 592.4 449 68.4
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 5.2e-167 591.7 448 66.3
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 1.2e-166 590.5 410 70.5
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 2.0e-166 589.7 435 65.7
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.4e-166 589.0 448 70.5
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 1.3e-165 587.0 431 65.0
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.7e-165 585.5 464 66.6
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 3.7e-165 585.5 461 65.1
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 2.4e-164 582.8 442 64.9
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 5.4e-164 581.6 457 64.8
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 1.2e-163 580.5 464 65.1
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 2.0e-163 579.7 467 64.9
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 2.7e-163 579.3 430 67.2
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 5.9e-163 578.2 471 59.9
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 6.6e-162 574.7 463 61.8
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.5e-161 573.5 418 68.9
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 7.3e-161 571.2 417 68.3
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 7.3e-161 571.2 462 63.4
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 7.5e-158 561.2 444 63.3
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 9.8e-158 560.8 461 62.9
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 1.0e-154 550.8 441 65.1
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 3.0e-154 549.3 441 65.1
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 3.0e-154 549.3 447 63.8
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 1.9e-153 546.6 450 63.8
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 2.5e-153 546.2 445 63.4
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 4.3e-153 545.4 453 63.1
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 1.1e-151 540.8 454 63.0
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 6.8e-151 538.1 454 62.8
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 1.2e-150 537.3 454 62.6
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 4.1e-148 528.9 486 59.3
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 5.4e-148 528.5 446 60.5
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.2e-142 510.8 423 59.6
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.2e-142 510.8 360 69.7
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 2.0e-142 510.0 528 54.2
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 1.4e-140 503.8 432 57.2
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.9e-137 493.4 720 41.7
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 6.2e-136 488.4 442 55.4
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.4e-135 486.5 433 58.0
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 4.4e-134 482.3 433 56.6
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 1.7e-133 480.3 416 62.7
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 1.0e-122 444.5 301 68.4
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 1.7e-122 443.7 332 67.5
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 6.9e-119 431.8 307 69.1
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 9.0e-119 431.4 400 59.0
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 1.2e-118 431.0 327 64.8
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 5.1e-114 415.6 439 47.8
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 1.3e-112 411.0 317 65.0
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 5.3e-111 405.6 315 65.1
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 4.6e-107 392.5 433 49.7
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 6.3e-104 382.1 364 51.4
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 6.3e-104 382.1 314 60.8
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 4.5e-102 375.9 369 47.2
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 4.2e-100 369.4 318 60.4
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 9.7e-97 358.2 243 72.4
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 5.3e-95 352.4 400 45.8
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 9.0e-95 351.7 324 57.4
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 5.7e-81 305.8 352 49.7
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 1.0e-74 285.0 216 65.7
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 5.2e-74 282.7 243 60.1
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 7.5e-73 278.9 436 39.9
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 2.8e-72 276.9 212 62.3
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 1.6e-67 261.2 218 61.5
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 1.8e-63 247.7 191 61.8
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.0e-58 231.9 213 58.2
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 2.1e-51 207.6 144 74.3
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 5.2e-50 203.0 135 73.3
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 8.3e-48 195.7 170 58.8
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 4.3e-44 183.3 227 44.9
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 1.4e-39 168.3 135 63.7
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 1.1e-36 158.7 132 60.6
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 1.4e-34 151.8 98 72.4
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 1.6e-30 138.3 128 55.5
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 3.8e-24 117.1 107 48.6
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 3.0e-21 107.5 386 24.9
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 1.9e-20 104.8 396 23.7
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 8.1e-19 99.4 82 62.2
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 3.4e-17 94.0 148 41.2
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 4.2e-15 87.0 58 74.1
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 8.1e-11 72.8 389 22.4
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 8.4e-08 62.8 40 77.5


User provided reference genes

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