Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 6.2e-155 552.0 413 100.0
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 1.8e-154 550.4 413 99.5
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 5.6e-124 449.1 408 89.0
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 1.3e-117 427.9 421 85.3
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 2.5e-116 423.7 417 84.4
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 1.7e-112 411.0 419 81.9
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 1.4e-111 407.9 426 80.3
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 1.0e-109 401.7 424 80.4
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 3.0e-109 400.2 420 80.7
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 5.1e-109 399.4 424 80.2
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 1.5e-108 397.9 423 80.9
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 4.3e-108 396.4 407 82.6
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 1.6e-107 394.4 425 79.8
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 9.0e-106 388.7 405 81.5
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 4.2e-103 379.8 419 80.0
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 7.2e-103 379.0 422 77.5
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 2.1e-102 377.5 419 78.3
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 2.1e-102 377.5 419 78.3
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 8.2e-99 365.5 405 78.5
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 1.1e-98 365.2 414 78.5
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 1.1e-95 355.1 405 78.3
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 7.2e-95 352.4 422 75.8
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 2.1e-94 350.9 404 76.5
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 1.4e-93 348.2 416 76.4
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 1.1e-92 345.1 414 75.1
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 4.4e-92 343.2 425 74.1
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 9.7e-92 342.0 414 74.4
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 1.3e-91 341.7 421 74.1
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 1.3e-91 341.7 415 74.9
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.8e-91 340.5 406 74.9
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 2.8e-91 340.5 407 75.7
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 3.7e-91 340.1 407 75.2
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 4.8e-91 339.7 412 73.5
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.8e-90 337.8 434 72.4
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 1.8e-90 337.8 413 73.8
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 1.8e-90 337.8 411 73.5
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 3.1e-90 337.0 409 72.4
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 9.1e-90 335.5 402 75.6
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.2e-89 335.1 434 71.9
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 4.5e-89 333.2 407 73.7
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 5.9e-89 332.8 418 74.9
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 7.7e-89 332.4 407 74.2
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.0e-88 332.0 407 73.2
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 1.7e-88 331.3 406 74.6
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 2.9e-88 330.5 418 72.7
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 6.5e-88 329.3 413 75.5
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 1.1e-87 328.6 417 62.6
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 1.9e-87 327.8 432 71.1
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 2.5e-87 327.4 407 73.0
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 3.2e-87 327.0 418 72.0
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 3.2e-87 327.0 444 66.7
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.6e-86 324.7 413 74.8
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 2.1e-86 324.3 411 74.0
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.9e-85 320.1 415 71.3
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 1.1e-84 318.5 430 71.4
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 3.3e-84 317.0 405 73.3
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 1.3e-83 315.1 414 71.0
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 2.2e-83 314.3 409 72.4
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 2.8e-83 313.9 410 72.7
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 4.8e-83 313.2 423 70.9
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 1.4e-82 311.6 403 73.4
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 3.1e-82 310.5 417 72.4
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 5.3e-82 309.7 403 72.5
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 7.0e-82 309.3 403 73.7
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 9.1e-82 308.9 409 72.1
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 4.5e-81 306.6 189 83.1
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 5.9e-81 306.2 421 71.3
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 7.7e-81 305.8 404 73.0
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.0e-80 305.4 403 73.2
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 1.7e-80 304.7 422 70.9
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 2.9e-80 303.9 429 67.8
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 1.5e-79 301.6 422 70.6
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 1.5e-79 301.6 422 70.6
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 6.1e-78 296.2 410 71.2
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 2.0e-76 291.2 394 70.3
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 3.4e-76 290.4 429 67.4
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 5.7e-76 289.7 502 51.4
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 5.7e-76 289.7 409 49.4
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 3.7e-75 287.0 401 69.1
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 6.3e-75 286.2 411 68.9
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 1.1e-74 285.4 411 67.9
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 4.1e-74 283.5 409 70.4
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 7.2e-71 272.7 403 70.0
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 1.2e-70 271.9 403 69.2
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 1.0e-69 268.9 403 68.7
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.6e-65 255.0 231 59.3
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.9e-63 248.1 232 56.5
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 1.0e-61 242.3 406 64.8
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 3.2e-58 230.7 415 47.2
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 5.8e-52 209.9 405 63.2
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 1.7e-43 181.8 269 81.8
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.5e-39 167.9 132 65.2
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 3.4e-36 157.5 233 43.3
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 1.3e-35 155.6 408 56.9
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 1.4e-29 135.6 70 92.9
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 6.4e-27 126.7 70 82.9
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 8.4e-27 126.3 70 82.9
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 2.1e-25 121.7 70 75.7
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 6.0e-25 120.2 70 82.9
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 1.3e-24 119.0 70 77.1
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 9.6e-23 112.8 67 73.1
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 2.8e-22 111.3 70 71.4
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 2.4e-21 108.2 70 71.4
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 2.9e-19 101.3 398 53.5
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 2.4e-10 71.6 36 80.6
Mapoly0026s0011 Marchantia polymorpha HOM05D006999 ORTHO05D008936 2.1e-06 58.5 121 30.6


User provided reference genes

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