Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.4e-198 696.0 350 100.0
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.1e-177 626.7 347 89.3
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.7e-170 601.7 349 84.8
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.4e-169 599.7 344 84.6
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.3e-167 593.2 347 84.4
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.9e-167 592.0 347 84.7
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 3.8e-167 591.7 339 84.1
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 5.5e-166 587.8 346 83.5
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 5.5e-166 587.8 339 85.0
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.5e-166 587.8 345 82.9
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 9.4e-166 587.0 347 81.0
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.6e-165 586.3 345 82.9
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 2.1e-165 585.9 339 84.7
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.0e-164 583.6 349 82.2
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 3.0e-164 582.0 350 80.9
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 3.0e-164 582.0 346 81.8
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 1.5e-163 579.7 346 81.8
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.6e-163 578.9 350 82.6
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.3e-162 576.6 346 81.5
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.1e-161 573.5 346 80.6
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 2.4e-161 572.4 345 81.7
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 4.1e-161 571.6 339 82.6
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 9.1e-161 570.5 346 79.5
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 3.4e-160 568.5 349 79.4
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 7.7e-160 567.4 352 80.7
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 2.2e-159 565.8 348 79.0
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 5.0e-159 564.7 346 78.9
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 8.5e-159 563.9 346 78.9
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 8.5e-159 563.9 346 78.9
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 1.1e-158 563.5 362 76.0
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 2.5e-158 562.4 326 84.4
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.2e-158 561.6 352 78.1
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 2.7e-157 558.9 350 77.7
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 3.6e-157 558.5 377 75.3
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.4e-156 556.6 350 78.0
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 3.0e-156 555.4 324 83.6
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 3.0e-156 555.4 350 76.9
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.9e-156 555.1 347 79.0
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 5.2e-156 554.7 348 77.9
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.1e-155 553.5 364 76.9
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.7e-154 549.7 354 76.6
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.2e-154 549.3 356 76.4
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 4.8e-154 548.1 324 83.0
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.8e-153 546.2 350 76.6
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 2.4e-153 545.8 348 75.9
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 4.1e-153 545.0 348 77.9
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 7.0e-153 544.3 347 76.9
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.2e-152 543.5 344 76.2
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 4.5e-152 541.6 344 77.0
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 5.9e-152 541.2 347 76.7
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 5.9e-152 541.2 354 75.4
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 7.7e-152 540.8 348 77.9
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 1.3e-151 540.0 348 77.3
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 6.5e-151 537.7 346 77.5
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 8.5e-151 537.3 329 79.9
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.5e-150 536.6 346 76.0
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.1e-149 532.7 346 77.7
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 6.1e-149 531.2 352 73.3
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 8.0e-149 530.8 346 76.0
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.8e-148 529.6 346 75.4
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 5.2e-148 528.1 352 76.7
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 8.8e-148 527.3 354 73.2
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.5e-147 526.6 354 74.3
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 2.0e-147 526.2 301 86.0
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.0e-147 526.2 332 77.4
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.8e-146 522.3 346 74.6
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.7e-146 521.9 323 78.3
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 4.8e-146 521.5 322 78.3
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 8.2e-146 520.8 352 74.4
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.8e-145 519.6 327 77.1
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.4e-145 519.2 399 66.4
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 3.1e-145 518.8 346 73.4
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 7.0e-145 517.7 349 74.5
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 3.5e-144 515.4 378 68.3
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.9e-144 514.6 351 74.1
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 5.9e-144 514.6 349 73.1
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 5.9e-144 514.6 334 74.3
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 7.7e-144 514.2 346 74.0
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.2e-143 512.7 356 73.0
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 2.2e-143 512.7 325 75.7
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 2.2e-143 512.7 339 75.8
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 2.2e-143 512.7 325 76.6
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 3.8e-143 511.9 345 74.2
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 6.5e-143 511.1 330 73.9
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 3.2e-142 508.8 325 76.9
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 5.5e-142 508.1 372 68.3
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 2.1e-141 506.1 344 75.0
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 6.1e-141 504.6 334 72.5
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.8e-140 503.1 325 76.0
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.3e-140 502.7 336 72.6
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 8.3e-138 494.2 326 74.2
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 5.4e-137 491.5 326 71.8
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 5.4e-137 491.5 323 74.6
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 5.4e-137 491.5 357 67.8
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 1.6e-136 490.0 351 68.9
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 2.0e-136 489.6 353 68.3
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 5.9e-136 488.0 320 72.5
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 7.7e-136 487.6 329 74.5
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 1.7e-135 486.5 326 73.0
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.7e-135 486.5 356 67.1
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 2.3e-135 486.1 350 67.4
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 2.3e-135 486.1 324 72.8
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.8e-135 485.3 311 76.5
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 5.0e-135 485.0 354 68.1
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 6.5e-135 484.6 350 67.4
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 8.6e-135 484.2 324 72.2
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 8.6e-135 484.2 353 66.9
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.1e-134 483.8 354 67.8
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.1e-134 483.8 363 67.5
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 1.5e-134 483.4 360 69.2
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 3.3e-134 482.3 320 71.9
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.6e-133 479.9 337 71.5
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 2.1e-133 479.6 340 70.3
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.8e-133 479.2 343 70.6
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 1.4e-132 476.9 354 67.8
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 2.3e-132 476.1 326 72.4
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 2.6e-131 472.6 325 73.2
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 4.4e-131 471.9 312 74.0
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 2.8e-130 469.2 344 69.2
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 1.4e-129 466.8 337 69.7
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 1.6e-128 463.4 331 68.0
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.3e-127 460.3 265 85.3
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 8.6e-127 457.6 355 65.4
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 1.1e-126 457.2 272 83.5
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 2.5e-126 456.1 321 67.6
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 3.3e-126 455.7 323 68.1
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.0e-124 450.7 344 66.9
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.1e-121 440.7 548 47.4
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 1.5e-118 430.3 265 81.1
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.5e-118 430.3 283 76.7
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 1.9e-110 403.3 353 59.8
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 8.1e-101 371.3 227 80.2
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.4e-100 370.5 344 56.1
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 1.3e-98 364.0 331 55.0
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 3.5e-96 355.9 246 69.1
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 9.6e-94 347.8 280 66.4
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.1e-92 344.4 223 74.9
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.4e-91 339.3 206 80.1
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 4.4e-91 339.0 290 57.9
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 3.0e-87 326.2 203 80.3
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.1e-86 324.3 267 65.5
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.8e-84 317.0 228 69.3
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.2e-82 310.1 187 82.9
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 2.0e-75 287.0 163 87.1
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 7.6e-67 258.5 371 41.0
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 7.1e-65 251.9 182 64.3
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 1.1e-60 238.0 184 65.8
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.8e-60 237.3 165 73.3
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.8e-60 237.3 212 60.8
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 9.0e-60 235.0 161 72.0
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 2.1e-56 223.8 141 72.3
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 6.1e-56 222.2 269 48.3
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 1.9e-49 200.7 329 41.0
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 3.3e-46 189.9 193 53.9
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 6.7e-39 165.6 112 74.1
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.2e-33 146.7 162 49.4
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 7.0e-28 129.0 276 34.8
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.6e-27 127.9 71 90.1
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 3.5e-27 126.7 260 33.5
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 3.5e-27 126.7 381 31.5
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.4e-23 114.8 127 50.4
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.0e-19 100.9 63 71.4
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.0e-18 98.6 57 80.7
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 3.8e-18 96.7 60 81.7
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 5.0e-18 96.3 60 73.3
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 1.1e-17 95.1 91 51.6
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 9.2e-12 75.5 75 53.3
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 2.5e-09 67.4 49 55.1
Gohir.D08G092932 Gossypium hirsutum HOM05D004315 ORTHO05D217518 3.1e-07 60.5 57 49.1


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