Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 5.8e-184 647.5 348 100.0
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.1e-86 324.3 374 58.6
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 1.0e-79 301.2 375 54.4
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 1.2e-77 294.3 396 54.8
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 6.8e-76 288.5 368 56.0
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.4e-75 285.8 377 55.7
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 5.4e-73 278.9 340 54.7
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 4.6e-72 275.8 366 49.7
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 3.3e-70 269.6 357 51.3
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 2.8e-69 266.5 286 56.3
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 4.8e-69 265.8 289 57.1
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 1.4e-68 264.2 298 56.0
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 6.9e-68 261.9 334 53.0
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.5e-67 260.8 359 50.7
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 9.9e-67 258.1 358 50.8
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 1.3e-66 257.7 296 56.1
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.9e-66 256.5 295 54.6
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 4.2e-65 252.7 297 54.5
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 5.4e-65 252.3 355 49.3
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 3.5e-64 249.6 360 47.5
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 4.6e-64 249.2 374 48.7
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 7.9e-64 248.4 321 50.5
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.9e-62 243.8 228 62.7
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 2.5e-62 243.4 328 50.0
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 3.3e-62 243.0 314 49.7
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 5.6e-62 242.3 351 51.0
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 5.6e-62 242.3 379 46.7
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 7.4e-62 241.9 276 53.6
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 1.3e-61 241.1 363 47.7
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 1.1e-60 238.0 380 45.8
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 1.1e-60 238.0 357 48.7
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 1.4e-60 237.7 375 44.5
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 3.1e-60 236.5 356 46.1
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 4.0e-60 236.1 319 49.8
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 6.9e-60 235.3 274 55.1
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 1.2e-59 234.6 336 46.7
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 7.6e-59 231.9 357 45.4
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.3e-58 231.1 268 54.5
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.7e-58 230.7 293 50.2
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 2.2e-58 230.3 273 53.8
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 4.9e-58 229.2 373 47.2
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 6.4e-58 228.8 264 55.3
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 6.4e-58 228.8 307 49.2
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 1.4e-57 227.6 277 53.8
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.4e-57 227.6 344 47.4
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 1.9e-57 227.3 275 51.3
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.2e-57 226.1 278 52.9
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 5.5e-57 225.7 275 53.1
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 7.1e-57 225.3 280 50.7
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 9.3e-57 224.9 275 53.5
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.6e-56 224.2 278 52.5
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 6.7e-55 218.8 319 48.6
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 6.7e-55 218.8 307 48.2
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 1.1e-54 218.0 187 67.4
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 1.1e-54 218.0 283 48.8
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 1.6e-53 214.2 356 43.8
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 1.6e-53 214.2 353 44.2
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 2.8e-53 213.4 250 54.8
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 4.8e-53 212.6 274 48.5
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 1.1e-52 211.5 294 47.6
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 1.4e-52 211.1 359 44.6
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 4.0e-52 209.5 279 49.5
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 6.9e-52 208.8 273 48.7
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 9.0e-52 208.4 350 46.3
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 1.2e-51 208.0 260 51.9
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.2e-51 208.0 355 44.8
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 2.0e-51 207.2 301 47.2
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 4.5e-51 206.1 358 45.0
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 5.8e-51 205.7 353 42.2
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 1.0e-50 204.9 271 49.8
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 1.3e-50 204.5 279 47.3
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 2.9e-50 203.4 354 42.7
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 1.1e-49 201.4 283 46.6
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 1.4e-49 201.1 324 43.8
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.9e-49 200.7 356 40.4
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 3.2e-49 199.9 351 42.2
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 4.2e-49 199.5 270 48.9
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 3.5e-48 196.4 259 50.2
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 1.8e-47 194.1 264 47.7
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 3.0e-47 193.4 358 40.8
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 3.0e-47 193.4 262 50.0
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 3.0e-47 193.4 358 46.4
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 3.9e-47 193.0 269 49.4
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.1e-46 191.4 347 42.7
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.9e-46 190.7 250 50.8
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 4.3e-46 189.5 199 57.3
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.3e-46 189.5 250 50.8
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 5.7e-46 189.1 261 50.6
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 5.7e-46 189.1 283 48.4
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 7.4e-46 188.7 395 37.7
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 2.1e-45 187.2 274 50.0
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 1.4e-44 184.5 307 42.7
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 2.4e-44 183.7 269 44.6
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 3.1e-44 183.3 260 44.6
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 5.3e-44 182.6 267 44.2
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 1.1e-41 174.9 503 32.6
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 2.1e-40 170.6 308 42.9
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 4.6e-40 169.5 200 51.5
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 4.6e-40 169.5 348 39.7
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.0e-39 168.3 345 39.4
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 3.9e-39 166.4 262 45.0
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 1.5e-38 164.5 240 43.3
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 4.1e-36 156.4 161 59.0
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 2.0e-35 154.1 312 39.1
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 2.2e-34 150.6 323 37.5
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 1.2e-32 144.8 266 41.4
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 2.1e-32 144.1 302 40.4
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 8.2e-29 132.1 264 39.4
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 4.5e-27 126.3 363 35.0
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.0e-26 125.2 244 35.7
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 3.8e-26 123.2 266 35.0
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 4.8e-21 106.3 228 39.9
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 2.4e-20 104.0 303 31.4
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.0e-18 98.6 170 41.8
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 2.0e-11 74.3 128 46.9
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.7e-10 71.2 81 55.6
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 2.2e-10 70.9 271 27.3
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 1.1e-09 68.6 331 28.1
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 5.7e-06 56.2 113 41.6


User provided reference genes

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