Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039386 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 1.1e-143 513.5 282 100.0
CSS0000156 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 2.1e-128 462.6 266 96.2
Dinv43031 Davidia involucrata HOM05D000627 ORTHO05D000365 3.9e-61 239.2 264 60.6
Actinidia30102 Actinidia chinensis HOM05D000627 ORTHO05D000365 3.3e-60 236.1 272 55.1
vmacro14770 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 4.7e-59 232.3 278 55.0
Actinidia23742 Actinidia chinensis HOM05D000627 ORTHO05D000365 2.4e-55 219.9 266 57.9
Rhsim01G0258300 Rhododendron simsii HOM05D000627 ORTHO05D000365 4.4e-49 199.1 267 52.1
Actinidia09499 Actinidia chinensis HOM05D000627 ORTHO05D000365 1.1e-47 194.5 270 52.2
Dinv19237 Davidia involucrata HOM05D000627 ORTHO05D000365 4.6e-46 189.1 265 56.6
TAR365G0889 Trochodendron aralioides HOM05D000627 ORTHO05D000365 1.5e-41 174.1 268 47.8
Lj2A1136G51 Lonicera japonica HOM05D000627 ORTHO05D000365 5.8e-41 172.2 265 47.5
TAR636G2769 Trochodendron aralioides HOM05D000627 ORTHO05D000365 9.9e-41 171.4 266 49.2
Nitab4.5_0001511g0020 Nicotiana tabacum HOM05D000627 ORTHO05D000365 3.0e-37 159.8 285 46.3
Sopen09g025180 Solanum pennellii HOM05D000627 ORTHO05D000365 3.9e-37 159.5 236 50.0
Solyc09g063010.4 Solanum lycopersicum HOM05D000627 ORTHO05D000365 1.6e-35 154.1 236 48.7
PGSC0003DMG400018950 Solanum tuberosum HOM05D000627 ORTHO05D000365 6.2e-35 152.1 236 48.3
TAR362G1325 Trochodendron aralioides HOM05D000627 ORTHO05D000365 8.1e-35 151.8 266 44.7
Haze_24752 Corylus avellana HOM05D000627 ORTHO05D000365 1.1e-34 151.4 279 46.2
Haze_24754 Corylus avellana HOM05D000627 ORTHO05D000365 1.1e-34 151.4 279 46.2
CiPaw.03G153100 Carya illinoinensis HOM05D000627 ORTHO05D000365 2.6e-33 146.7 294 41.8
MSTRG.12504 Avicennia marina HOM05D000627 ORTHO05D000365 3.4e-33 146.4 264 43.2
Manes.13G043000 Manihot esculenta HOM05D000627 ORTHO05D000365 9.9e-33 144.8 284 43.3
Duzib138G1278 Durio zibethinus HOM05D000627 ORTHO05D000365 1.7e-32 144.1 293 41.3
Manes.12G044000 Manihot esculenta HOM05D000627 ORTHO05D000365 2.2e-32 143.7 279 40.9
Nn1g03096 Nelumbo nucifera HOM05D000627 ORTHO05D000365 3.8e-32 142.9 271 43.9
Peaxi162Scf00052g01817 Petunia axillaris HOM05D000627 ORTHO05D000365 4.9e-32 142.5 293 42.0
Gohir.A07G154050 Gossypium hirsutum HOM05D000627 ORTHO05D000365 3.2e-31 139.8 292 41.8
Gohir.A07G201900 Gossypium hirsutum HOM05D000627 ORTHO05D000365 5.4e-31 139.0 283 43.8
Gorai.001G234900 Gossypium raimondii HOM05D000627 ORTHO05D000365 7.1e-31 138.7 288 41.3
Thecc.01G232500 Theobroma cacao HOM05D000627 ORTHO05D000365 7.1e-31 138.7 286 43.7
Hma1.2p1_1393F.1_g280200 Hydrangea macrophylla HOM05D000627 ORTHO05D000365 9.3e-31 138.3 244 45.5
Gohir.D07G208200 Gossypium hirsutum HOM05D000627 ORTHO05D000365 1.6e-30 137.5 291 42.3
Gohir.D07G160350 Gossypium hirsutum HOM05D000627 ORTHO05D000365 2.7e-30 136.7 289 41.9
Gorai.001G183400 Gossypium raimondii HOM05D000627 ORTHO05D000365 2.7e-30 136.7 289 41.9
ClCG09G009390 Citrullus lanatus HOM05D000627 ORTHO05D000365 3.9e-29 132.9 264 42.8
TAR633G1458 Trochodendron aralioides HOM05D000627 ORTHO05D000365 3.9e-29 132.9 265 42.6
Cpa.g.sc8.199 Carica papaya HOM05D000627 ORTHO05D000365 6.6e-29 132.1 280 41.8
Nn3g19874 Nelumbo nucifera HOM05D000627 ORTHO05D000365 6.6e-29 132.1 258 41.9
CiPaw.04G108300 Carya illinoinensis HOM05D000627 ORTHO05D000365 4.3e-28 129.4 284 40.8
Gohir.A11G135300 Gossypium hirsutum HOM05D000627 ORTHO05D000365 9.6e-28 128.3 296 39.5
TWI14G0020 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 9.6e-28 128.3 283 40.3
Gohir.D11G141500 Gossypium hirsutum HOM05D000627 ORTHO05D000365 1.3e-27 127.9 296 41.2
Gorai.007G151900 Gossypium raimondii HOM05D000627 ORTHO05D000365 1.6e-27 127.5 296 41.2
CsaV3_7G025510 Cucumis sativus L. HOM05D000627 ORTHO05D000365 4.8e-27 125.9 264 42.4
MBI07_g08928_MAGBIO Magnolia biondii HOM05D000627 ORTHO05D000365 3.1e-26 123.2 272 41.5
Rhsim13G0042000 Rhododendron simsii HOM05D000627 ORTHO05D000365 3.1e-26 123.2 274 42.0
Glyma.03G170300 Glycine max HOM05D000627 ORTHO05D000365 4.0e-26 122.9 269 40.9
Lsat_1_v5_gn_9_11161 Lactuca sativa HOM05D000627 ORTHO05D000365 6.9e-26 122.1 278 42.1
Lsat_1_v5_gn_5_179121 Lactuca sativa HOM05D000627 ORTHO05D000365 1.5e-25 120.9 267 41.9
Eucgr.K03592 Eucalyptus grandis HOM05D000627 ORTHO05D000365 2.6e-25 120.2 234 47.0
Duzib133G0060 Durio zibethinus HOM05D000627 ORTHO05D000365 3.4e-25 119.8 249 40.2
Sabra02G0192000 Salix brachista HOM05D000627 ORTHO05D000365 1.4e-23 114.4 273 39.2
HanXRQChr10g0280531 Helianthus annuus HOM05D000627 ORTHO05D000365 1.9e-23 114.0 287 39.4
Oeu052106.1 Olea europaea HOM05D000627 ORTHO05D000365 1.9e-23 114.0 234 45.3
Lj1g0006722 Lotus japonicus HOM05D000627 ORTHO05D000365 4.2e-23 112.8 290 39.7
Phvul.007G156200 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 9.3e-23 111.7 276 37.7
Prupe.8G209100 Prunus persica HOM05D000627 ORTHO05D000365 9.3e-23 111.7 259 42.9
Potri.002G252800 Populus trichocarpa HOM05D000627 ORTHO05D000365 2.1e-22 110.5 280 38.6
VMungo0720G0926 Vigna mungo HOM05D000627 ORTHO05D000365 2.1e-22 110.5 274 37.2
TWI23G1235 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 7.9e-22 108.6 290 37.6
Glyma.13G130100 Glycine max HOM05D000627 ORTHO05D000365 3.0e-21 106.7 283 37.1
ECA247G1435 Erigeron canadensis HOM05D000627 ORTHO05D000365 3.9e-21 106.3 281 39.1
Sed0002217 Sechium edule HOM05D000627 ORTHO05D000365 3.9e-21 106.3 260 37.3
Ciclev10019585m.g Citrus clementina HOM05D000627 ORTHO05D000365 6.7e-21 105.5 276 38.8
TWI59G0312 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 1.9e-20 104.0 283 38.2
Cc01_g17430 Coffea canephora HOM05D000627 ORTHO05D000365 5.6e-20 102.4 285 36.5
Lalb_Chr21g0314221 Lupinus albus HOM05D000627 ORTHO05D000365 5.6e-20 102.4 292 36.3
Sopen06g002870 Solanum pennellii HOM05D000627 ORTHO05D000365 7.4e-20 102.1 267 37.8
GSVIVG01028516001 Vitis vinifera HOM05D000627 ORTHO05D000365 2.1e-19 100.5 265 40.0
MELO3C024155.2 Cucumis melo HOM05D000627 ORTHO05D000365 2.8e-19 100.1 216 40.7
Solyc06g008030.3 Solanum lycopersicum HOM05D000627 ORTHO05D000365 3.7e-19 99.8 273 35.9
MD10G1170600 Malus domestica HOM05D000627 ORTHO05D000365 6.2e-19 99.0 287 39.0
Glyma.10G042800 Glycine max HOM05D000627 ORTHO05D000365 1.1e-18 98.2 279 34.8
Nitab4.5_0003180g0060 Nicotiana tabacum HOM05D000627 ORTHO05D000365 2.4e-18 97.1 222 40.5
SalBow6G4067 Salvia bowleyana HOM05D000627 ORTHO05D000365 1.5e-17 94.4 176 46.0
Migut.D00504 Erythranthe guttata HOM05D000627 ORTHO05D000365 5.8e-17 92.4 229 39.7
Aqoxy2G03834 Aquilegia oxysepala HOM05D000627 ORTHO05D000365 1.0e-16 91.7 252 36.5
Ca_09623_v3 Cicer arietinum L. HOM05D000627 ORTHO05D000365 8.4e-16 88.6 275 38.2
Phvul.001G168700 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 5.5e-15 85.9 250 37.2
Migut.N02248 Erythranthe guttata HOM05D000627 ORTHO05D000365 7.1e-15 85.5 227 41.0
Ca_08772_v3 Cicer arietinum L. HOM05D000627 ORTHO05D000365 1.2e-14 84.7 265 36.2
Lalb_Chr01g0019351 Lupinus albus HOM05D000627 ORTHO05D000365 2.1e-14 84.0 186 38.7
VMungo1383G2379 Vigna mungo HOM05D000627 ORTHO05D000365 4.6e-14 82.8 230 37.8
Medtr1g069155 Medicago truncatula HOM05D000627 ORTHO05D000365 2.3e-13 80.5 285 34.0
PGSC0003DMG400014705 Solanum tuberosum HOM05D000627 ORTHO05D000365 6.7e-13 79.0 232 35.3
CANSAT01G2270 Cannabis sativa HOM05D000627 ORTHO05D000365 1.9e-12 77.4 279 33.7
CANSAT01G2597 Cannabis sativa HOM05D000627 ORTHO05D000365 1.9e-12 77.4 279 33.7
CAN.G180.6 Capsicum annuum HOM05D000627 ORTHO05D000365 4.3e-12 76.3 107 52.3
Nitab4.5_0001740g0080 Nicotiana tabacum HOM05D000627 ORTHO05D000365 4.3e-12 76.3 195 37.9
CsaV3_3G028610 Cucumis sativus L. HOM05D000627 ORTHO05D000365 1.3e-11 74.7 267 33.7
vmacro02732 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 2.1e-11 73.9 150 44.7
QL09p044299 Quercus lobata HOM05D000627 ORTHO05D000365 2.8e-11 73.6 239 35.6
Atru.chr5.1930 Acer truncatum HOM05D000627 ORTHO05D000365 2.4e-10 70.5 257 35.0
Lalb_Chr25g0289671 Lupinus albus HOM05D000627 ORTHO05D000365 2.4e-10 70.5 284 31.3
ClCG07G001610 Citrullus lanatus HOM05D000627 ORTHO05D000365 4.1e-10 69.7 284 32.0
ECA248G0854 Erigeron canadensis HOM05D000627 ORTHO05D000365 6.9e-10 68.9 226 34.1
Cfa005226 Carpinus fangiana HOM05D000627 ORTHO05D043648 9.0e-10 68.6 170 40.0
MELO3C012808.2 Cucumis melo HOM05D000627 ORTHO05D000365 5.9e-09 65.9 270 32.2
TAR636G0002 Trochodendron aralioides HOM05D000627 ORTHO05D000365 1.0e-08 65.1 109 44.0
TPR.G7308 Trifolium pratense HOM05D000627 ORTHO05D000365 2.9e-08 63.5 261 33.0
MD05G1182300 Malus domestica HOM05D000627 ORTHO05D000365 3.8e-08 63.2 289 33.2
Medtr7g099540 Medicago truncatula HOM05D000627 ORTHO05D000365 1.1e-07 61.6 228 33.3
AT2G20180 Arabidopsis thaliana HOM05D000627 ORTHO05D000365 1.4e-07 61.2 141 37.6
RcHm_v2.0_Chr6g0285491 Rosa chinensis HOM05D000627 ORTHO05D000365 1.6e-06 57.8 236 33.5
Sed0005046 Sechium edule HOM05D000627 ORTHO05D000365 1.6e-06 57.8 264 30.7
Thhalv10001974m.g Eutrema salsugineum HOM05D000627 ORTHO05D000365 2.7e-06 57.0 226 32.7
BcaB03g16810 Brassica carinata HOM05D000627 ORTHO05D000365 4.6e-06 56.2 235 29.8
FAN15G0159 Fragaria x ananassa HOM05D000627 ORTHO05D000365 4.6e-06 56.2 223 31.8
Lj5g0009311 Lotus japonicus HOM05D000627 ORTHO05D000365 7.9e-06 55.5 220 33.2


User provided reference genes

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