Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039077 Camellia sinensis var. sinensis HOM05D010941 ORTHO05D000412 1.6e-39 165.6 84 100.0
Cfa010058 Carpinus fangiana HOM05D000581 ORTHO05D000412 7.8e-18 93.6 86 55.8
CiPaw.13G138400 Carya illinoinensis HOM05D000581 ORTHO05D000412 3.9e-17 91.3 86 54.7
Duzib170G0821 Durio zibethinus HOM05D000581 ORTHO05D000412 3.3e-16 88.2 85 54.1
QL01p013207 Quercus lobata HOM05D000581 ORTHO05D000412 3.3e-16 88.2 86 54.7
Cpa.g.sc32.127 Carica papaya HOM05D000581 ORTHO05D000412 9.5e-16 86.7 85 52.9
Prupe.6G124800 Prunus persica HOM05D000581 ORTHO05D000412 1.2e-15 86.3 85 54.1
Gorai.009G087000 Gossypium raimondii HOM05D000581 ORTHO05D000412 2.1e-15 85.5 85 52.9
Dinv29449 Davidia involucrata HOM05D000581 ORTHO05D000412 1.8e-14 82.4 67 64.2
Glyma.13G317900 Glycine max HOM05D000581 ORTHO05D000412 9.2e-11 70.1 85 47.1
Haze_23422 Corylus avellana HOM05D010941 ORTHO05D000412 2.1e-10 68.9 67 52.2
Sabra09G0112800 Salix brachista HOM05D000581 ORTHO05D000412 2.7e-10 68.6 65 55.4
VMungo1080G1526 Vigna mungo HOM05D000581 ORTHO05D000412 5.1e-09 64.3 85 43.5
Phvul.005G125700 Phaseolus vulgaris HOM05D000581 ORTHO05D000412 6.6e-09 63.9 85 44.7
CsaV3_6G014900 Cucumis sativus L. HOM05D010941 ORTHO05D000412 8.7e-09 63.5 83 45.8
ClCG02G022070 Citrullus lanatus HOM05D010941 ORTHO05D000412 1.5e-08 62.8 84 45.2
Manes.09G059100 Manihot esculenta HOM05D000581 ORTHO05D000412 3.3e-08 61.6 85 31.8
Sed0003716 Sechium edule HOM05D010941 ORTHO05D000412 3.3e-08 61.6 83 47.0
Duzib093G1459 Durio zibethinus HOM05D000581 ORTHO05D000412 5.6e-08 60.8 85 35.3
Gohir.A09G138100 Gossypium hirsutum HOM05D000581 ORTHO05D000412 5.6e-08 60.8 85 35.3
Gohir.D09G136500 Gossypium hirsutum HOM05D000581 ORTHO05D000412 5.6e-08 60.8 85 35.3
COL.COLO4_29784 Corchorus olitorius HOM05D000581 ORTHO05D000412 7.3e-08 60.5 85 35.3
Gorai.006G156600 Gossypium raimondii HOM05D000581 ORTHO05D000412 7.3e-08 60.5 85 35.3
Thecc.05G085200 Theobroma cacao HOM05D000581 ORTHO05D000412 7.3e-08 60.5 85 35.3
Dinv31661 Davidia involucrata HOM05D000581 ORTHO05D000412 2.1e-07 58.9 85 34.1
Lj3g0023809 Lotus japonicus HOM05D010941 ORTHO05D000412 2.1e-07 58.9 87 37.9
Haze_23420 Corylus avellana HOM05D000581 ORTHO05D000412 2.8e-07 58.5 85 35.3
PGR102G2836 Punica granatum HOM05D000581 ORTHO05D000412 3.6e-07 58.2 78 46.2
Medtr2g086010 Medicago truncatula HOM05D010941 ORTHO05D000412 1.1e-06 56.6 86 34.9
Duzib128G0312 Durio zibethinus HOM05D000581 ORTHO05D000412 1.8e-06 55.8 85 32.9
Manes.08G023500 Manihot esculenta HOM05D000581 ORTHO05D000412 3.1e-06 55.1 86 34.9
Medtr2g085155 Medicago truncatula HOM05D010941 ORTHO05D000412 3.1e-06 55.1 86 33.7
TPR.G23789 Trifolium pratense HOM05D010941 ORTHO05D000412 6.9e-06 53.9 65 43.1
Zm00001eb096040 Zea mays HOM05D000581 ORTHO05D000412 6.9e-06 53.9 86 31.4
Peaxi162Scf00095g00213 Petunia axillaris HOM05D000581 ORTHO05D000412 9.0e-06 53.5 74 33.8
Sopen12g016360 Solanum pennellii HOM05D010941 ORTHO05D000412 9.0e-06 53.5 85 34.1


User provided reference genes

Program Settings