Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022374 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.5e-40 169.1 86 100.0
CSS0038230 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.5e-40 169.1 86 100.0
CSS0040030 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.0e-12 76.6 57 70.2
CSS0040505 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.0e-12 76.6 57 70.2
Actinidia12812 Actinidia chinensis HOM05D004367 ORTHO05D004937 1.7e-12 75.9 57 66.7
Dinv04310 Davidia involucrata HOM05D004367 ORTHO05D004937 1.7e-12 75.9 57 66.7
Dinv20169 Davidia involucrata HOM05D000397 ORTHO05D004937 2.9e-12 75.1 57 64.9
Lj1A844G36 Lonicera japonica HOM05D004367 ORTHO05D004937 2.9e-12 75.1 57 66.7
Rhsim06G0197900 Rhododendron simsii HOM05D004367 ORTHO05D004937 1.5e-11 72.8 57 61.4
Oeu005412.1 Olea europaea HOM05D004367 ORTHO05D004937 1.9e-11 72.4 73 54.8
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 2.5e-11 72.0 57 61.4
Hma1.2p1_0480F.1_g161800 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 3.3e-11 71.6 57 64.9
Hma1.2p1_0480F.1_g161810 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 3.3e-11 71.6 57 64.9
Hma1.2p1_2210F.1_g317160 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 3.3e-11 71.6 57 64.9
vmacro11860 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 3.3e-11 71.6 55 67.3
vmacro22868 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 3.3e-11 71.6 55 67.3
GSVIVG01014349001 Vitis vinifera HOM05D004367 ORTHO05D004937 4.2e-11 71.2 57 64.9
SalBow8G3529 Salvia bowleyana HOM05D004367 ORTHO05D004937 5.5e-11 70.9 61 57.4
DCAR_017144 Daucus carota HOM05D004367 ORTHO05D004937 7.2e-11 70.5 57 57.9
ECA234G0664 Erigeron canadensis HOM05D004367 ORTHO05D004937 7.2e-11 70.5 78 50.0
Nitab4.5_0000207g0150 Nicotiana tabacum HOM05D004367 ORTHO05D004937 7.2e-11 70.5 57 57.9
Nitab4.5_0002383g0110 Nicotiana tabacum HOM05D004367 ORTHO05D004937 7.2e-11 70.5 57 57.9
Atru.chr2.2651 Acer truncatum HOM05D004367 ORTHO05D004937 9.5e-11 70.1 78 53.8
Atru.chr2.2673 Acer truncatum HOM05D004367 ORTHO05D004937 9.5e-11 70.1 78 53.8
MSTRG.15226 Avicennia marina HOM05D004367 ORTHO05D004937 1.2e-10 69.7 57 59.6
Solyc10g006990.3 Solanum lycopersicum HOM05D004367 ORTHO05D004937 1.2e-10 69.7 57 57.9
Sopen10g002900 Solanum pennellii HOM05D004367 ORTHO05D004937 1.2e-10 69.7 57 57.9
PGSC0003DMG400025036 Solanum tuberosum HOM05D004367 ORTHO05D004937 1.2e-10 69.7 57 57.9
Manes.03G110700 Manihot esculenta HOM05D004367 ORTHO05D004937 1.6e-10 69.3 57 64.9
Potri.001G400800 Populus trichocarpa HOM05D004367 ORTHO05D004937 1.6e-10 69.3 57 61.4
Sabra16G0262900 Salix brachista HOM05D004367 ORTHO05D004937 1.6e-10 69.3 57 61.4
Sc16g0006960 Simmondsia chinensis HOM05D004367 ORTHO05D004937 1.6e-10 69.3 57 59.6
Nn1g06556 Nelumbo nucifera HOM05D004367 ORTHO05D004937 2.1e-10 68.9 57 61.4
MELO3C016705.2 Cucumis melo HOM05D004367 ORTHO05D004937 4.7e-10 67.8 57 59.6
CsaV3_4G033760 Cucumis sativus L. HOM05D004367 ORTHO05D004937 4.7e-10 67.8 57 59.6
Cc05_g12110 Coffea canephora HOM05D004367 ORTHO05D004937 6.1e-10 67.4 57 61.4
Lsat_1_v5_gn_5_127821 Lactuca sativa HOM05D004367 ORTHO05D004937 6.1e-10 67.4 57 57.9
SGA_v2.0_scaffold73G24268 Striga asiatica HOM05D004367 ORTHO05D004937 6.1e-10 67.4 57 57.9
TAR624G0790 Trochodendron aralioides HOM05D004367 ORTHO05D004937 6.1e-10 67.4 57 61.4
Eucgr.F01119 Eucalyptus grandis HOM05D004367 ORTHO05D004937 8.0e-10 67.0 57 59.6
Sed0004687 Sechium edule HOM05D004367 ORTHO05D004937 1.0e-09 66.6 57 57.9
TWI39G0928 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 1.0e-09 66.6 57 57.9
ClCG11G018120 Citrullus lanatus HOM05D004367 ORTHO05D004937 1.4e-09 66.2 57 56.1
Duzib213G0391 Durio zibethinus HOM05D004367 ORTHO05D004937 1.4e-09 66.2 57 59.6
HanXRQChr12g0361521 Helianthus annuus HOM05D004367 ORTHO05D004937 1.4e-09 66.2 57 57.9
PSO210G1788 Papaver somniferum HOM05D004367 ORTHO05D004937 2.3e-09 65.5 57 59.6
Peaxi162Scf00027g02615 Petunia axillaris HOM05D004367 ORTHO05D004937 2.3e-09 65.5 57 54.4
COL.COLO4_09395 Corchorus olitorius HOM05D004367 ORTHO05D004937 3.0e-09 65.1 55 61.8
ATR0730G126 Amborella trichopoda HOM05D004367 ORTHO05D004937 4.0e-09 64.7 57 59.6
Aqoxy4G00819 Aquilegia oxysepala HOM05D004367 ORTHO05D004937 4.0e-09 64.7 57 59.6
Migut.M00812 Erythranthe guttata HOM05D004367 ORTHO05D004937 5.2e-09 64.3 57 56.1
Glyma.13G277700 Glycine max HOM05D004367 ORTHO05D004937 5.2e-09 64.3 57 57.9
Oeu060551.2 Olea europaea HOM05D004367 ORTHO05D004937 5.2e-09 64.3 57 59.6
Cpa.g.sc80.55 Carica papaya HOM05D004367 ORTHO05D004937 6.8e-09 63.9 57 59.6
MBI07_g32654_MAGBIO Magnolia biondii HOM05D004367 ORTHO05D004937 6.8e-09 63.9 57 61.4
PGR083G2352 Punica granatum HOM05D004367 ORTHO05D004937 6.8e-09 63.9 57 56.1
TWI38G0759 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 6.8e-09 63.9 57 57.9
Lalb_Chr25g0286441 Lupinus albus HOM05D004367 ORTHO05D004937 8.9e-09 63.5 57 57.9
SGA_v2.0_scaffold34G13821 Striga asiatica HOM05D004367 ORTHO05D004937 8.9e-09 63.5 57 54.4
QL08p021548 Quercus lobata HOM05D004367 ORTHO05D004937 1.5e-08 62.8 57 57.9
Thecc.07G087300 Theobroma cacao HOM05D004367 ORTHO05D004937 1.5e-08 62.8 57 56.1
Carub.0008s1407 Capsella rubella HOM05D004367 ORTHO05D004937 2.0e-08 62.4 57 52.6
Gohir.D01G051200 Gossypium hirsutum HOM05D004367 ORTHO05D004937 2.0e-08 62.4 57 56.1
Gorai.002G071000 Gossypium raimondii HOM05D004367 ORTHO05D004937 2.0e-08 62.4 57 56.1
Aa31LG3G10140 Aethionema arabicum HOM05D004367 ORTHO05D004937 2.6e-08 62.0 57 49.1
BcaB08g35738 Brassica carinata HOM05D004367 ORTHO05D004937 2.6e-08 62.0 57 52.6
Ciclev10008024m.g Citrus clementina HOM05D004367 ORTHO05D004937 2.6e-08 62.0 57 57.9
Gohir.A01G064120 Gossypium hirsutum HOM05D004367 ORTHO05D004937 2.6e-08 62.0 57 56.1
Lj3g0015758 Lotus japonicus HOM05D004367 ORTHO05D004937 2.6e-08 62.0 57 54.4
BcaC04g20419 Brassica carinata HOM05D004367 ORTHO05D004937 3.4e-08 61.6 57 54.4
A10p11150 Brassica napus HOM05D004367 ORTHO05D004937 3.4e-08 61.6 57 54.4
C09p43730 Brassica napus HOM05D004367 ORTHO05D004937 3.4e-08 61.6 57 54.4
BolC9t57258H Brassica oleracea HOM05D004367 ORTHO05D004937 3.4e-08 61.6 57 54.4
BraA10t43208Z Brassica rapa HOM05D004367 ORTHO05D004937 3.4e-08 61.6 57 54.4
CDE10G0244 Ceratophyllum demersum HOM05D004367 ORTHO05D004937 3.4e-08 61.6 57 54.4
Sp6g15840 Schrenkiella parvula HOM05D004367 ORTHO05D004937 3.4e-08 61.6 57 54.4
Zm00001eb157140 Zea mays HOM05D004367 ORTHO05D004937 3.4e-08 61.6 57 52.6
Ciclev10008854m.g Citrus clementina HOM05D004367 ORTHO05D004937 5.7e-08 60.8 57 57.9
Psat5g242760 Pisum sativum HOM05D004367 ORTHO05D004937 5.7e-08 60.8 57 54.4
BcaB05g22072 Brassica carinata HOM05D004367 ORTHO05D004937 7.5e-08 60.5 57 52.6
CARHR266920 Cardamine hirsuta HOM05D004367 ORTHO05D004937 7.5e-08 60.5 55 56.4
Cfa020594 Carpinus fangiana HOM05D004367 ORTHO05D004937 7.5e-08 60.5 57 52.6
Ah.06g184060 Amaranthus hybridus HOM05D004367 ORTHO05D004937 9.8e-08 60.1 57 54.4
AL8G28710 Arabidopsis lyrata HOM05D004367 ORTHO05D004937 9.8e-08 60.1 57 50.9
EL10Ac4g08166 Beta vulgaris HOM05D004367 ORTHO05D004937 9.8e-08 60.1 57 54.4
AT5G53770 Arabidopsis thaliana HOM05D004367 ORTHO05D004937 1.3e-07 59.7 57 50.9
MD03G1226500 Malus domestica HOM05D004367 ORTHO05D004937 1.3e-07 59.7 57 50.9
Prupe.4G182900 Prunus persica HOM05D004367 ORTHO05D004937 1.3e-07 59.7 57 50.9
TPR.G38993 Trifolium pratense HOM05D004367 ORTHO05D004937 1.3e-07 59.7 57 52.6
VMungo1080G0845 Vigna mungo HOM05D004367 ORTHO05D004937 1.3e-07 59.7 57 52.6
FvH4_3g20190 Fragaria vesca HOM05D004367 ORTHO05D004937 1.7e-07 59.3 57 52.6
FAN16G0302 Fragaria x ananassa HOM05D004367 ORTHO05D004937 1.7e-07 59.3 57 52.6
FAN21G3330 Fragaria x ananassa HOM05D004367 ORTHO05D004937 1.7e-07 59.3 57 52.6
FAN25G3266 Fragaria x ananassa HOM05D004367 ORTHO05D004937 1.7e-07 59.3 57 52.6
THA.LOC104799923 Tarenaya hassleriana HOM05D004367 ORTHO05D004937 2.2e-07 58.9 57 49.1
unitig_899.g15291 Utricularia gibba HOM05D004367 ORTHO05D004937 2.2e-07 58.9 57 49.1
HPP92_007964 Vanilla planifolia HOM05D004367 ORTHO05D004937 2.2e-07 58.9 57 52.6
HPP92_008014 Vanilla planifolia HOM05D004367 ORTHO05D004937 2.2e-07 58.9 57 52.6
arahy.Tifrunner.gnm1.ann1.6ZWE2K Arachis hypogaea HOM05D004367 ORTHO05D004937 2.8e-07 58.5 57 49.1
arahy.Tifrunner.gnm1.ann1.SV3A8G Arachis hypogaea HOM05D004367 ORTHO05D004937 2.8e-07 58.5 57 49.1
CiPaw.11G168700 Carya illinoinensis HOM05D004367 ORTHO05D004937 2.8e-07 58.5 57 54.4
Gohir.A05G179700 Gossypium hirsutum HOM05D004367 ORTHO05D004937 2.8e-07 58.5 57 52.6
AUR62034287 Chenopodium quinoa HOM05D004367 ORTHO05D004937 4.9e-07 57.8 55 54.5
Phvul.005G070800 Phaseolus vulgaris HOM05D004367 ORTHO05D004937 4.9e-07 57.8 57 52.6
Hund22921 Selenicereus undatus HOM05D004367 ORTHO05D004937 4.9e-07 57.8 57 52.6
AUR62029381 Chenopodium quinoa HOM05D004367 ORTHO05D004937 6.3e-07 57.4 53 54.7
Ca_01836_v3 Cicer arietinum L. HOM05D004367 ORTHO05D004937 6.3e-07 57.4 57 52.6
Gohir.A08G145700 Gossypium hirsutum HOM05D004367 ORTHO05D004937 6.3e-07 57.4 56 53.6
SEGI_40468 Sequoiadendron giganteum HOM05D004367 ORTHO05D004937 6.3e-07 57.4 62 51.6
RcHm_v2.0_Chr5g0034001 Rosa chinensis HOM05D004367 ORTHO05D004937 8.3e-07 57.0 57 52.6
TPR.G29961 Trifolium pratense HOM05D004367 ORTHO05D004937 3.1e-06 55.1 55 52.7
Medtr2g079330 Medicago truncatula HOM05D004367 ORTHO05D004937 4.1e-06 54.7 57 49.1


User provided reference genes

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